Click here to switch to the map view.

The map label for this gene is 86751346

Identifier: 86751346

GI number: 86751346

Start: 4817905

End: 4818504

Strand: Reverse

Name: 86751346

Synonym: RPB_4240

Alternate gene names: NA

Gene position: 4818504-4817905 (Counterclockwise)

Preceding gene: 86751347

Following gene: 86751345

Centisome position: 90.38

GC content: 65.83

Gene sequence:

>600_bases
ATGCACCAGCGTTTTCGTCCCGTCGCCGCCTGGTTCGGCGCGGCCTGTCTTGCCGTCGCGTTGGCGTCGGCGTCCGGCTC
CGCCGCCTTCGCCCAGGCAAAGTCAGAGGCCGAGACCAAGCCCTCGCCCGAGGCCGCGGCGCCGTCGCAGCCGGCGTTCA
AGGAAATCACGCTGACCGAGAAGCAGGTCGCGGGCGTGCTCGCCGCCCACAAGGACGTCGACGCGGTTGCCGCCAAGCTT
CCCGACGATCCGCAGGCCAAGCCGGATCCGAAGATCATCCAGCAACTCGACGCCGCCGCGAAGAAGCACGGCTTCGCCGA
TTACGGCGACTACAGCGAGGTGGTCGAGACCATCAGCATGGTGATGGCCGGGGTCGATGCCAAGACCAAGACCTATGTCG
GCCCCGAGGCCGAGCTGAAGGCCCAGATCGCGATCGTCGAGGCCGATCCCAAGATGTCGGCCGAGGACAAGAAGCTGGCG
CTGGCCGATCTCAACGAGGCGCTGAAATCGCCCGGCCCGACGGTCAAGAACCAGACCAACATCGACCTCGTGCTGAAGAA
CTACGACAAGCTCGTCGACGCGCTCGAGGAAGACGAATAG

Upstream 100 bases:

>100_bases
TCATCTTCGTTCGGCCCTAATCGACATCAAGATCAAGCCTGCCTTGAACCGGAGATTCGCCGGTTCTGACCAACAGGGCG
GACCCACCGAGGAGAATTTC

Downstream 100 bases:

>100_bases
CCGCGCGATCTCGACATCCGCCCACAGAAACAACAACGCCGCCTCATCCCCGAGGCGGCGTTTTTGTTTGTCGCAACCGT
TCAGCCGCACCCACCCCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MHQRFRPVAAWFGAACLAVALASASGSAAFAQAKSEAETKPSPEAAAPSQPAFKEITLTEKQVAGVLAAHKDVDAVAAKL
PDDPQAKPDPKIIQQLDAAAKKHGFADYGDYSEVVETISMVMAGVDAKTKTYVGPEAELKAQIAIVEADPKMSAEDKKLA
LADLNEALKSPGPTVKNQTNIDLVLKNYDKLVDALEEDE

Sequences:

>Translated_199_residues
MHQRFRPVAAWFGAACLAVALASASGSAAFAQAKSEAETKPSPEAAAPSQPAFKEITLTEKQVAGVLAAHKDVDAVAAKL
PDDPQAKPDPKIIQQLDAAAKKHGFADYGDYSEVVETISMVMAGVDAKTKTYVGPEAELKAQIAIVEADPKMSAEDKKLA
LADLNEALKSPGPTVKNQTNIDLVLKNYDKLVDALEEDE
>Mature_199_residues
MHQRFRPVAAWFGAACLAVALASASGSAAFAQAKSEAETKPSPEAAAPSQPAFKEITLTEKQVAGVLAAHKDVDAVAAKL
PDDPQAKPDPKIIQQLDAAAKKHGFADYGDYSEVVETISMVMAGVDAKTKTYVGPEAELKAQIAIVEADPKMSAEDKKLA
LADLNEALKSPGPTVKNQTNIDLVLKNYDKLVDALEEDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21043; Mature: 21043

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQRFRPVAAWFGAACLAVALASASGSAAFAQAKSEAETKPSPEAAAPSQPAFKEITLTE
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
KQVAGVLAAHKDVDAVAAKLPDDPQAKPDPKIIQQLDAAAKKHGFADYGDYSEVVETISM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
VMAGVDAKTKTYVGPEAELKAQIAIVEADPKMSAEDKKLALADLNEALKSPGPTVKNQTN
HHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
IDLVLKNYDKLVDALEEDE
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHQRFRPVAAWFGAACLAVALASASGSAAFAQAKSEAETKPSPEAAAPSQPAFKEITLTE
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
KQVAGVLAAHKDVDAVAAKLPDDPQAKPDPKIIQQLDAAAKKHGFADYGDYSEVVETISM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
VMAGVDAKTKTYVGPEAELKAQIAIVEADPKMSAEDKKLALADLNEALKSPGPTVKNQTN
HHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
IDLVLKNYDKLVDALEEDE
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA