Click here to switch to the map view.

The map label for this gene is foxA [H]

Identifier: 86751345

GI number: 86751345

Start: 4815208

End: 4817553

Strand: Reverse

Name: foxA [H]

Synonym: RPB_4239

Alternate gene names: 86751345

Gene position: 4817553-4815208 (Counterclockwise)

Preceding gene: 86751346

Following gene: 86751344

Centisome position: 90.36

GC content: 67.95

Gene sequence:

>2346_bases
ATGCCGACCGCCCGCCGCTGGCCGATCCTGTCATCGCCGCGCTTGCTTCGCAGCGCCACGGCCCGACTGCTGCTCGGCGC
CGCGATCTGCCTCGTCAGTCTGCCGCCCTCGTCGCGACCGGCCGAAGCCCAGGGCGTTGCGCCCGCGGCCGGCGCCGAGC
TGCCGAGCGTCACCGTCGATGCGCCCGCCGCCCGGCCGGCGCGTCCGCGATCGGTGGCGGCGCCGCAGCGAAATCCACAG
GCCGTGGCGCGCCGGCCGAATCCTCAACGCAATCCCGCGCCGGCGCCGCCGACGCCGTCCGAACGCGCCGCGGCCGCCGC
AGCCGTGCTCAACGAGCAGAAACTCGGCTACCGGGCGATGCCGAGCCCGACGACGCTGCGCACCGGCGCCTCGCCGCTCG
AGAGCTCGCAATCCGTCAATGTGGTGCCCGAGCAGGTGTTGAAGGATCAGTTGCCGCGCAATCTCGACGACGCGCTCGCC
AACGTCTCCGGCGTCACCCAGACCAACACGCTCGCCGGCTCGTTCGACGCGGTGATCCGGCGCGGCTTCGGCGACAATCG
CGACGGTTCGATCATGCGCAACGGCATGCCGCTGGTGCAGGGCCGCGCCCTCGGCGCGACCGTCGAGAGCGTCGAGGTGC
TGAAGGGCCCGGCGTCGCTGCTGTACGGCATCCAGACCCCCGGCGGCATCGTCAACACCATCAGCCGGCGGCCGGAGCTG
TATCAGCACGGCTCGCTGACGTTGCTCGGCTCCAGCTTCGGCGGCGGCAAGAACGGCGCCAATGCGATCTTCGACCTCAC
CGGGCCGATCGGCGACACCGGCCTCGCCTATCGGTTCATCGGCTCTGGGCTCGACGAGGATTACTGGCGCAATTTCGGCG
CCAATCGCGAGATGCTGCTGGCGCCGTCGCTGGCCTGGTATGGCGAGCGCACCACCGTGCAGTTCAGCTACGAGCACCGC
GAGTTCAGCTACCCGTTCGATCGCGGCACGTCGTTCGTCAACGGCGCGCCGCTGGCGATCCCGGCGACGCGACGGCTCGA
CGAGGCGTTCAACCGCACCTGGGGCAAGTCGGATCTGGTGCAGGGCTCGGTCGAGCACCGCCTCGACGACGTCTGGAAGC
TCACCGCCGCCTACAGCTACAATTCCGAGACCTACGACGCCAATCAGCTCCGCATCACCGGCGTCAATGCCGCAACCGGC
GTCGAGACCCGCAGCAATGACGGCACCAAGGGCGCGCTGGCCTATTCGAGCTACGGCACGTCATATCTGTCGGGCGAGCT
CTGGCTCGGCGGGCTGCGCAACGACGTGCTGATCGGCGGCGATGCGCAGCGCCGCGTGATCTATCGGCAGAACCTGATCC
GCCAGTCGACGCCGAGCTTCAACTTCTACAATCCGGTCTATGGCCTGGTGCAGCCGGGCACGACCGTCTCGGCGTCCGAC
AGCGACCAGACCGACAAGCTCGAAACCCGCTCGCTGTTCGTGCAGGACACGCTGCATCTCACCGACTGGTTCTCGCTGGT
CGGCGGCCTGCGCTGGATGGAATACGATCAGCTCGCCGGTCGCGGCCGGCCGTTCACCGCCAACACCGACCTCGCGGGGT
CGAAGGTGCTGCCGCTCGCCGGCGCGATTTTCAAGCTCAACCAGCAGGTCTCGCTCTACGCCAGCTACACCCAGTCGCTG
CAGCCGAGTTCGACCATCGCGCCGCTGACCGGCGGCGTCGTCATCGGCTCCAACATCGCGCCCGAAGAGGGCACGCAATA
TGAAGCCGGCGTCAAATTCGACCTGAACAAGCGGCTGTCCGGCACGCTGGCGGTCTACGACATCGACAAGAAGAACGTGC
TGGTGTCGCAGTTCAACGCGTCGACGGGGCTGAACGAATATCGCGCCGCCGGCAAGGTGCGCTCGCGCGGCGTCGAATTC
GACGTCACCGGCCGGCTCGACGATCATTGGAGCACGATCGCCAGCTACGGCTACACCGACGCCTATGTGACCGAAGATCC
GACGCTGGTCGGCAAGCGCCTGCAGAACGTCGCGATGAACACCGCGTCGCTGTTCCTGGTGTATGATTTCGGCACCGCGC
TGCCCGGGCGGCTCCGGCTCGGCGGCGGCGCCCGCTATGTCGGCGACCGGCCCGGCGACAGCACCAATTCCTTCGTGCTG
CCGGCCTATACGGTGGCCGATGTCTTCGCCAGCTACGAGGTGAAACACGCCGGCATCCCGGTGATCTATCAGCTCAACGT
CAAGAACCTGTTCGATCAGGTGTACTACCCGTCGGCGGTCAACACCCTGAACGTCGCCCTCGGCGACGCCCGGCGGTTCT
CGCTGTCGGCGACGGCGAAGTTCTAG

Upstream 100 bases:

>100_bases
ATTGCGCCTTAGAGCGATTCAATCGCGGCTGCATTCTCCCGCTTTGCTGCGTCTGCTAAGGGCGGCTGTCACTCACAGTT
GCTTTTGAAAGTCACACGCA

Downstream 100 bases:

>100_bases
CGTTGTGGCAAGGTCGTCCGCGATCAAACCGGCGCTGCTGCAACTGCATTCGATCGCCGGCCTGATCCTGTCGCTGTTCC
TCGCCGTGATCGCGCTGAGC

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 781; Mature: 780

Protein sequence:

>781_residues
MPTARRWPILSSPRLLRSATARLLLGAAICLVSLPPSSRPAEAQGVAPAAGAELPSVTVDAPAARPARPRSVAAPQRNPQ
AVARRPNPQRNPAPAPPTPSERAAAAAAVLNEQKLGYRAMPSPTTLRTGASPLESSQSVNVVPEQVLKDQLPRNLDDALA
NVSGVTQTNTLAGSFDAVIRRGFGDNRDGSIMRNGMPLVQGRALGATVESVEVLKGPASLLYGIQTPGGIVNTISRRPEL
YQHGSLTLLGSSFGGGKNGANAIFDLTGPIGDTGLAYRFIGSGLDEDYWRNFGANREMLLAPSLAWYGERTTVQFSYEHR
EFSYPFDRGTSFVNGAPLAIPATRRLDEAFNRTWGKSDLVQGSVEHRLDDVWKLTAAYSYNSETYDANQLRITGVNAATG
VETRSNDGTKGALAYSSYGTSYLSGELWLGGLRNDVLIGGDAQRRVIYRQNLIRQSTPSFNFYNPVYGLVQPGTTVSASD
SDQTDKLETRSLFVQDTLHLTDWFSLVGGLRWMEYDQLAGRGRPFTANTDLAGSKVLPLAGAIFKLNQQVSLYASYTQSL
QPSSTIAPLTGGVVIGSNIAPEEGTQYEAGVKFDLNKRLSGTLAVYDIDKKNVLVSQFNASTGLNEYRAAGKVRSRGVEF
DVTGRLDDHWSTIASYGYTDAYVTEDPTLVGKRLQNVAMNTASLFLVYDFGTALPGRLRLGGGARYVGDRPGDSTNSFVL
PAYTVADVFASYEVKHAGIPVIYQLNVKNLFDQVYYPSAVNTLNVALGDARRFSLSATAKF

Sequences:

>Translated_781_residues
MPTARRWPILSSPRLLRSATARLLLGAAICLVSLPPSSRPAEAQGVAPAAGAELPSVTVDAPAARPARPRSVAAPQRNPQ
AVARRPNPQRNPAPAPPTPSERAAAAAAVLNEQKLGYRAMPSPTTLRTGASPLESSQSVNVVPEQVLKDQLPRNLDDALA
NVSGVTQTNTLAGSFDAVIRRGFGDNRDGSIMRNGMPLVQGRALGATVESVEVLKGPASLLYGIQTPGGIVNTISRRPEL
YQHGSLTLLGSSFGGGKNGANAIFDLTGPIGDTGLAYRFIGSGLDEDYWRNFGANREMLLAPSLAWYGERTTVQFSYEHR
EFSYPFDRGTSFVNGAPLAIPATRRLDEAFNRTWGKSDLVQGSVEHRLDDVWKLTAAYSYNSETYDANQLRITGVNAATG
VETRSNDGTKGALAYSSYGTSYLSGELWLGGLRNDVLIGGDAQRRVIYRQNLIRQSTPSFNFYNPVYGLVQPGTTVSASD
SDQTDKLETRSLFVQDTLHLTDWFSLVGGLRWMEYDQLAGRGRPFTANTDLAGSKVLPLAGAIFKLNQQVSLYASYTQSL
QPSSTIAPLTGGVVIGSNIAPEEGTQYEAGVKFDLNKRLSGTLAVYDIDKKNVLVSQFNASTGLNEYRAAGKVRSRGVEF
DVTGRLDDHWSTIASYGYTDAYVTEDPTLVGKRLQNVAMNTASLFLVYDFGTALPGRLRLGGGARYVGDRPGDSTNSFVL
PAYTVADVFASYEVKHAGIPVIYQLNVKNLFDQVYYPSAVNTLNVALGDARRFSLSATAKF
>Mature_780_residues
PTARRWPILSSPRLLRSATARLLLGAAICLVSLPPSSRPAEAQGVAPAAGAELPSVTVDAPAARPARPRSVAAPQRNPQA
VARRPNPQRNPAPAPPTPSERAAAAAAVLNEQKLGYRAMPSPTTLRTGASPLESSQSVNVVPEQVLKDQLPRNLDDALAN
VSGVTQTNTLAGSFDAVIRRGFGDNRDGSIMRNGMPLVQGRALGATVESVEVLKGPASLLYGIQTPGGIVNTISRRPELY
QHGSLTLLGSSFGGGKNGANAIFDLTGPIGDTGLAYRFIGSGLDEDYWRNFGANREMLLAPSLAWYGERTTVQFSYEHRE
FSYPFDRGTSFVNGAPLAIPATRRLDEAFNRTWGKSDLVQGSVEHRLDDVWKLTAAYSYNSETYDANQLRITGVNAATGV
ETRSNDGTKGALAYSSYGTSYLSGELWLGGLRNDVLIGGDAQRRVIYRQNLIRQSTPSFNFYNPVYGLVQPGTTVSASDS
DQTDKLETRSLFVQDTLHLTDWFSLVGGLRWMEYDQLAGRGRPFTANTDLAGSKVLPLAGAIFKLNQQVSLYASYTQSLQ
PSSTIAPLTGGVVIGSNIAPEEGTQYEAGVKFDLNKRLSGTLAVYDIDKKNVLVSQFNASTGLNEYRAAGKVRSRGVEFD
VTGRLDDHWSTIASYGYTDAYVTEDPTLVGKRLQNVAMNTASLFLVYDFGTALPGRLRLGGGARYVGDRPGDSTNSFVLP
AYTVADVFASYEVKHAGIPVIYQLNVKNLFDQVYYPSAVNTLNVALGDARRFSLSATAKF

Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=740, Percent_Identity=26.3513513513513, Blast_Score=162, Evalue=7e-41,
Organism=Escherichia coli, GI1787344, Length=701, Percent_Identity=24.679029957204, Blast_Score=127, Evalue=4e-30,
Organism=Escherichia coli, GI1787024, Length=392, Percent_Identity=27.2959183673469, Blast_Score=85, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 84155; Mature: 84024

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTARRWPILSSPRLLRSATARLLLGAAICLVSLPPSSRPAEAQGVAPAAGAELPSVTVD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEC
APAARPARPRSVAAPQRNPQAVARRPNPQRNPAPAPPTPSERAAAAAAVLNEQKLGYRAM
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PSPTTLRTGASPLESSQSVNVVPEQVLKDQLPRNLDDALANVSGVTQTNTLAGSFDAVIR
CCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHH
RGFGDNRDGSIMRNGMPLVQGRALGATVESVEVLKGPASLLYGIQTPGGIVNTISRRPEL
HCCCCCCCCCEEECCCCEECCCCCCCHHHHHHHHCCCCHHEEECCCCCHHHHHHHCCCCH
YQHGSLTLLGSSFGGGKNGANAIFDLTGPIGDTGLAYRFIGSGLDEDYWRNFGANREMLL
HHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCHHHHHHCCCCCEEEE
APSLAWYGERTTVQFSYEHREFSYPFDRGTSFVNGAPLAIPATRRLDEAFNRTWGKSDLV
ECCHHHCCCCEEEEEEECCCCCCCCHHCCCCCCCCCCEEECCHHHHHHHHHHCCCCCHHH
QGSVEHRLDDVWKLTAAYSYNSETYDANQLRITGVNAATGVETRSNDGTKGALAYSSYGT
CCHHHHHHHHHHEEEEEEECCCCCCCCCEEEEEECCHHCCCCCCCCCCCCEEEEECCCCC
SYLSGELWLGGLRNDVLIGGDAQRRVIYRQNLIRQSTPSFNFYNPVYGLVQPGTTVSASD
CCCCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCCEECCCC
SDQTDKLETRSLFVQDTLHLTDWFSLVGGLRWMEYDQLAGRGRPFTANTDLAGSKVLPLA
CCCCCHHHHHEEEEHHHHHHHHHHHHHCCCHHEEHHHHCCCCCCEECCCCCCCCCCHHHH
GAIFKLNQQVSLYASYTQSLQPSSTIAPLTGGVVIGSNIAPEEGTQYEAGVKFDLNKRLS
HHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCC
GTLAVYDIDKKNVLVSQFNASTGLNEYRAAGKVRSRGVEFDVTGRLDDHWSTIASYGYTD
CEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCC
AYVTEDPTLVGKRLQNVAMNTASLFLVYDFGTALPGRLRLGGGARYVGDRPGDSTNSFVL
CEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEECCCEEECCCCCCCCCCCEEE
PAYTVADVFASYEVKHAGIPVIYQLNVKNLFDQVYYPSAVNTLNVALGDARRFSLSATAK
CHHHHHHHHHHCEEECCCCCEEEEECHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECC
F
C
>Mature Secondary Structure 
PTARRWPILSSPRLLRSATARLLLGAAICLVSLPPSSRPAEAQGVAPAAGAELPSVTVD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEC
APAARPARPRSVAAPQRNPQAVARRPNPQRNPAPAPPTPSERAAAAAAVLNEQKLGYRAM
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PSPTTLRTGASPLESSQSVNVVPEQVLKDQLPRNLDDALANVSGVTQTNTLAGSFDAVIR
CCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHH
RGFGDNRDGSIMRNGMPLVQGRALGATVESVEVLKGPASLLYGIQTPGGIVNTISRRPEL
HCCCCCCCCCEEECCCCEECCCCCCCHHHHHHHHCCCCHHEEECCCCCHHHHHHHCCCCH
YQHGSLTLLGSSFGGGKNGANAIFDLTGPIGDTGLAYRFIGSGLDEDYWRNFGANREMLL
HHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCHHHHHHCCCCCEEEE
APSLAWYGERTTVQFSYEHREFSYPFDRGTSFVNGAPLAIPATRRLDEAFNRTWGKSDLV
ECCHHHCCCCEEEEEEECCCCCCCCHHCCCCCCCCCCEEECCHHHHHHHHHHCCCCCHHH
QGSVEHRLDDVWKLTAAYSYNSETYDANQLRITGVNAATGVETRSNDGTKGALAYSSYGT
CCHHHHHHHHHHEEEEEEECCCCCCCCCEEEEEECCHHCCCCCCCCCCCCEEEEECCCCC
SYLSGELWLGGLRNDVLIGGDAQRRVIYRQNLIRQSTPSFNFYNPVYGLVQPGTTVSASD
CCCCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCCCEECCCC
SDQTDKLETRSLFVQDTLHLTDWFSLVGGLRWMEYDQLAGRGRPFTANTDLAGSKVLPLA
CCCCCHHHHHEEEEHHHHHHHHHHHHHCCCHHEEHHHHCCCCCCEECCCCCCCCCCHHHH
GAIFKLNQQVSLYASYTQSLQPSSTIAPLTGGVVIGSNIAPEEGTQYEAGVKFDLNKRLS
HHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCC
GTLAVYDIDKKNVLVSQFNASTGLNEYRAAGKVRSRGVEFDVTGRLDDHWSTIASYGYTD
CEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCC
AYVTEDPTLVGKRLQNVAMNTASLFLVYDFGTALPGRLRLGGGARYVGDRPGDSTNSFVL
CEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEECCCEEECCCCCCCCCCCEEE
PAYTVADVFASYEVKHAGIPVIYQLNVKNLFDQVYYPSAVNTLNVALGDARRFSLSATAK
CHHHHHHHHHHCEEECCCCCEEEEECHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609; 10103258; 7642488 [H]