| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is crp [C]
Identifier: 86751337
GI number: 86751337
Start: 4807808
End: 4808470
Strand: Reverse
Name: crp [C]
Synonym: RPB_4231
Alternate gene names: 86751337
Gene position: 4808470-4807808 (Counterclockwise)
Preceding gene: 86751338
Following gene: 86751336
Centisome position: 90.19
GC content: 61.39
Gene sequence:
>663_bases ATGAAGCTGGAAGCCGACTTCGACTATCGAGAGTACTTCTCCAGGCCGGGCGCTGGGAAGGCGCTGCTGCGGTTTGCGCG GGATCAGGTGATCTTCTCCCAAGGCGATGCCGCCGACAACGTCTTCTTTCTGCTCGAGGGTCGGATCAAAGTCGTCGTGT TGTCCGCGCAGGGCAAGGAGGCTGCGACCCGGCTGGTGGAGTCCGGGCAGTTCTTCGGCGACGGCTGCCTGATCGGCGAT GAAACCCGATACGCGACCACGATCGCGATGCGCGATTGCGTCGTCGCCTCGATCAACAAATGCCGGGTGATCGAGGCCTT GCGCACCGAGCCGGATTTCGCCGAACTGTTCATTCGCCATCTGCTGATCCGCAACCGCGGGATGGAAGAGGATCTGATCG ATCAGCTGTTCAATTCGAGCGAGAAGCGGCTGGCGCGGTTGCTACTGCGTCTGTCGAAGCTCGACGATGACGGCAGCGCG CAACCGATCGCGCCGCATATCAGCCAGGAGACGCTGGCCGAAATGATCGGCACCACCCGCTCGCGCGTCAGCTTCTTCAT GAACAAGTTCCGCAAGCTCGGTCTGATCAGCTACGATCGCAACATCGAGGTGCATCCGCGGCTGAGCGCGATGTTGCAGG ATCGCTCTCAGGCCCGCAACTGA
Upstream 100 bases:
>100_bases CCTCGTACCTTCACTAGGAATGGAGTTTTTACCAGCGTTTTCAGGCTACGGCAGTCTATCATTTGAGCCGCATCAGCTTC GCAGGGAGTTGGAGAGGCCA
Downstream 100 bases:
>100_bases GACCGGGCGGAGGCACAGGCCTGATACCGGGCTCGCCCCCAACGCCAGGCAGAGCACGGCTGCATCCCGCCCCCTCGCGC TTTGTGCGGCCGTTTGTATA
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator Crp/Fnr Family; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator; Response Regulator Receiver; Crp/Fnr Family Transcriptional Regulator; CAMP-Regulatory Protein; Cyclic-AMP Receptor-Like Protein
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MKLEADFDYREYFSRPGAGKALLRFARDQVIFSQGDAADNVFFLLEGRIKVVVLSAQGKEAATRLVESGQFFGDGCLIGD ETRYATTIAMRDCVVASINKCRVIEALRTEPDFAELFIRHLLIRNRGMEEDLIDQLFNSSEKRLARLLLRLSKLDDDGSA QPIAPHISQETLAEMIGTTRSRVSFFMNKFRKLGLISYDRNIEVHPRLSAMLQDRSQARN
Sequences:
>Translated_220_residues MKLEADFDYREYFSRPGAGKALLRFARDQVIFSQGDAADNVFFLLEGRIKVVVLSAQGKEAATRLVESGQFFGDGCLIGD ETRYATTIAMRDCVVASINKCRVIEALRTEPDFAELFIRHLLIRNRGMEEDLIDQLFNSSEKRLARLLLRLSKLDDDGSA QPIAPHISQETLAEMIGTTRSRVSFFMNKFRKLGLISYDRNIEVHPRLSAMLQDRSQARN >Mature_220_residues MKLEADFDYREYFSRPGAGKALLRFARDQVIFSQGDAADNVFFLLEGRIKVVVLSAQGKEAATRLVESGQFFGDGCLIGD ETRYATTIAMRDCVVASINKCRVIEALRTEPDFAELFIRHLLIRNRGMEEDLIDQLFNSSEKRLARLLLRLSKLDDDGSA QPIAPHISQETLAEMIGTTRSRVSFFMNKFRKLGLISYDRNIEVHPRLSAMLQDRSQARN
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24983; Mature: 24983
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLEADFDYREYFSRPGAGKALLRFARDQVIFSQGDAADNVFFLLEGRIKVVVLSAQGKE CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEECCCHH AATRLVESGQFFGDGCLIGDETRYATTIAMRDCVVASINKCRVIEALRTEPDFAELFIRH HHHHHHHCCCEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LLIRNRGMEEDLIDQLFNSSEKRLARLLLRLSKLDDDGSAQPIAPHISQETLAEMIGTTR HHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHH SRVSFFMNKFRKLGLISYDRNIEVHPRLSAMLQDRSQARN HHHHHHHHHHHHCCCEEECCCCEECHHHHHHHHHHHHCCC >Mature Secondary Structure MKLEADFDYREYFSRPGAGKALLRFARDQVIFSQGDAADNVFFLLEGRIKVVVLSAQGKE CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEECCCHH AATRLVESGQFFGDGCLIGDETRYATTIAMRDCVVASINKCRVIEALRTEPDFAELFIRH HHHHHHHCCCEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LLIRNRGMEEDLIDQLFNSSEKRLARLLLRLSKLDDDGSAQPIAPHISQETLAEMIGTTR HHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHH SRVSFFMNKFRKLGLISYDRNIEVHPRLSAMLQDRSQARN HHHHHHHHHHHHCCCEEECCCCEECHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA