Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751336

Identifier: 86751336

GI number: 86751336

Start: 4807064

End: 4807669

Strand: Reverse

Name: 86751336

Synonym: RPB_4230

Alternate gene names: NA

Gene position: 4807669-4807064 (Counterclockwise)

Preceding gene: 86751337

Following gene: 86751335

Centisome position: 90.17

GC content: 65.18

Gene sequence:

>606_bases
ATGGACGTGGCGTGGCAGGACCGGCTCGCGATTCGCGACCTGATCGAGAATTGGGTGGTGTGGCGGGACGCCGGAGACTG
GGAGCGCTTCCGGACGGTCTGGTTCGACGACGGCCGGATGATGGCGACCTGGACGCAAGGCACCGCCGACGAATTCATCG
CGATGAGCCAGGCCGGCTGGGCCAAGGGCGTTTCGATCCTGCATTTCCTCGGCGGGCAGGCGATCGATCTGGCGGGGCCC
CGCGCGATCTCCCAGACCAAAATGACGATCGCGCAGCGCGCTGTCGTGCACGATGTTCAGGTCGACGTGGTCTGCACCGG
GCGGTTCTATGATTTCCTCGAGAAACGCGATGGCCGCTGGGGCTTCGTGCTGCGTCAACCGATCTACGAAAAGGACCGGA
TGGATCCGGTCGATCCCGCGGCGAAGCTGTCGCTCGATCCCGCATCGCTCGCGCAATTCCCCGAGGGCTATCGGCACCTC
GCTTATCTGCAGAGCCAGATCGGCTACCAGATCAAGCGCGACATGCCGGGCCTGAAAGGCGCGGCGGTGGAGCGGCTTTA
CGCCAGCGGCGCGGCGTGGTTGAGGGGAGAGAAGCTGGATCGGTAG

Upstream 100 bases:

>100_bases
CCAACGCCAGGCAGAGCACGGCTGCATCCCGCCCCCTCGCGCTTTGTGCGGCCGTTTGTATAGTGGCGCCGCGCAACAAG
ACGCGGGACGGAAACGGCAG

Downstream 100 bases:

>100_bases
GCTTTCGACGCCGTCGGCGTCATCCTGAGGTGCGCGCATCTTTGCGCGCCTCGAAGGATGGGCCACACGTGCCGCTGTCA
TCCTTCGAGGCTCGCTTCGC

Product: PEP2 protein-like

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MDVAWQDRLAIRDLIENWVVWRDAGDWERFRTVWFDDGRMMATWTQGTADEFIAMSQAGWAKGVSILHFLGGQAIDLAGP
RAISQTKMTIAQRAVVHDVQVDVVCTGRFYDFLEKRDGRWGFVLRQPIYEKDRMDPVDPAAKLSLDPASLAQFPEGYRHL
AYLQSQIGYQIKRDMPGLKGAAVERLYASGAAWLRGEKLDR

Sequences:

>Translated_201_residues
MDVAWQDRLAIRDLIENWVVWRDAGDWERFRTVWFDDGRMMATWTQGTADEFIAMSQAGWAKGVSILHFLGGQAIDLAGP
RAISQTKMTIAQRAVVHDVQVDVVCTGRFYDFLEKRDGRWGFVLRQPIYEKDRMDPVDPAAKLSLDPASLAQFPEGYRHL
AYLQSQIGYQIKRDMPGLKGAAVERLYASGAAWLRGEKLDR
>Mature_201_residues
MDVAWQDRLAIRDLIENWVVWRDAGDWERFRTVWFDDGRMMATWTQGTADEFIAMSQAGWAKGVSILHFLGGQAIDLAGP
RAISQTKMTIAQRAVVHDVQVDVVCTGRFYDFLEKRDGRWGFVLRQPIYEKDRMDPVDPAAKLSLDPASLAQFPEGYRHL
AYLQSQIGYQIKRDMPGLKGAAVERLYASGAAWLRGEKLDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22923; Mature: 22923

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVAWQDRLAIRDLIENWVVWRDAGDWERFRTVWFDDGRMMATWTQGTADEFIAMSQAGW
CCCCHHHHHHHHHHHHHCEEECCCCCHHHEEEEEEECCEEEEEECCCCHHHHHHHHCCCH
AKGVSILHFLGGQAIDLAGPRAISQTKMTIAQRAVVHDVQVDVVCTGRFYDFLEKRDGRW
HHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHCCCCE
GFVLRQPIYEKDRMDPVDPAAKLSLDPASLAQFPEGYRHLAYLQSQIGYQIKRDMPGLKG
EEEECCCCHHHCCCCCCCCHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCH
AAVERLYASGAAWLRGEKLDR
HHHHHHHHCCCHHCCCCCCCC
>Mature Secondary Structure
MDVAWQDRLAIRDLIENWVVWRDAGDWERFRTVWFDDGRMMATWTQGTADEFIAMSQAGW
CCCCHHHHHHHHHHHHHCEEECCCCCHHHEEEEEEECCEEEEEECCCCHHHHHHHHCCCH
AKGVSILHFLGGQAIDLAGPRAISQTKMTIAQRAVVHDVQVDVVCTGRFYDFLEKRDGRW
HHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHCCCCE
GFVLRQPIYEKDRMDPVDPAAKLSLDPASLAQFPEGYRHLAYLQSQIGYQIKRDMPGLKG
EEEECCCCHHHCCCCCCCCHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCH
AAVERLYASGAAWLRGEKLDR
HHHHHHHHCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA