Click here to switch to the map view.

The map label for this gene is 86751317

Identifier: 86751317

GI number: 86751317

Start: 4783668

End: 4785464

Strand: Reverse

Name: 86751317

Synonym: RPB_4211

Alternate gene names: NA

Gene position: 4785464-4783668 (Counterclockwise)

Preceding gene: 86751318

Following gene: 86751306

Centisome position: 89.76

GC content: 62.66

Gene sequence:

>1797_bases
ATGCATAGTTTCGGAAATCGGACTCTCTCCAGCCGCTTGCGGCTGATGACGATGGCGAGCGCCGCGGCATTGGTCGCCGC
GTCGATGACGCTGGCGGCGCCGGCATGGGCCGCCGACGATGCGGTGCTGAAGAAGTGGATCGACGAGGAGTTTCAGCCCT
CGACGCTGTCGAAGGACGACCAGCTCAAGGAACTGCAATGGTTCGCCAAGGCGGCCGAGCCGTTCAAGGGCATGGACATC
AACGTCGTCTCCGAGACCATCACCACCCACGAATACGAGGCGAAGACGCTCGCGAAGGCGTTCTCGGAGATCACCGGCAT
CAAGCTCAAGCATGATCTGATCCAGGAAGGCGACGTGGTCGAGAAGCTGCAGACCCAGATGCAGTCCGGCAAGAACGTCT
ATGACGGCTGGATCAACGACAGCGACCTGATCGGCACGCATTTCCGCTACGGCCAGACCATCGCGCTGTCCGACTACATG
ACCGGCGAGGGCAAGGACGTCACCGATCCGATGCTCGATATCGATGACTTCATCGGCAAGTCGTTCACCACCGCGCCCGA
CAAGAAGATGTACCAGTTGCCCGACCAGCAGTTCGCCAATCTGTACTGGTTCCGCTACGACTGGTTCACCAATCCGGACT
ACAAGGCGAAGTTCAAGGCGAAATACGGCTACGAGCTCGGCGTCCCGGTCAACTGGTCGGCCTACGAGGATATCGCCGAG
TTCTTCACCAACGACATCAAGGAGATCAACGGCGTCAAGGTCTATGGTCACATGGACTACGGCAAGAAGGATCCCTCGCT
CGGCTGGCGCTTCACCGACGCCTGGCTGTCGATGGCCGGCAACGGCGACAAGGGCTTGCCGAACGGTCTGCCGGTCGACG
AATGGGGCATCCGCATGGAAGGCTGCCGTCCGGTCGGCTCCTCGATGGAGCGCGGCGGCGACACCAACGGTCCCGCGGCG
GTGTACTCCATCGTGAAGTATCTCGACTGGATGAAGAAGTATGCGCCGCCGCAGGCGCAGGGCATGACCTTCTCGGAGTC
GGGGCCGGTGCCGGCGCAGGGCAACGTCGCCCAGCAGATGTTCTGGTACACCGCCTTCACCGCCGACATGGTGAAGCCCG
GCCTGCCGGTGGTGAACGCCGACGGCACGCCGAAATGGCGGATGGCCCCCTCGCCGAAGGGCGCCTATTGGAAAGACGGC
ATGAAGCTCGGCTATCAGGACGTCGGCTCCGGCACGCTCTTGAAGTCGACGCCGCCGGATCGCCGCAAGGCGGCCTGGCT
GTATCTGCAGTTCATCACCTCGAAGACGGTGAGCCTGAAGAAGAGCCATGTCGGTCTCACCTTCATCCGCGAGAGCGATA
TCTGGGACAAATCGTTCACCGAGCGCGCGCCCAAGCTCGGTGGCCTGATCGAGTTCTATCGCTCGCCGGCCCGCGTGCAG
TGGTCGCCGACCGGCAACAACATCCCGGACTATCCGAAGCTGGCGCAATTGTGGTGGCAGAACATCGGCGATGCATCGTC
CGGTGCGAAGACGCCGCAGGCCGCCATGGATTCGCTGGCGGCCGCGCAGGACTCGGTGCTCGAGCGGCTCGAGCGGTCGA
AGGTGCAGGGTGATTGCGGTCCGAAGCTGAACAAGAAAGAGACCGCCGAGTACTGGTACGAGAAGTCCGCCAAGGACGGC
AACATCGCTCCGCAGCGCAAGCTGGCGAACGAGAAGCCGAAGGGTGAGACCGTCGATTACGACACCCTGATCAAGTCCTG
GCCCGCCTCGCCGCCGAAGCGCGCGGAGGCGAAGTAA

Upstream 100 bases:

>100_bases
TCGCCGTCGCGGTGTTCCGCACGGTGTGAGCGGTGCAACGAGAAGCAGATCCGGGATCAACCCGGAGCTCGAGAAACGTC
GTTCAACGGAGGAAGCAAGG

Downstream 100 bases:

>100_bases
GCGCTCGCTTCGGTTTGGCGTTCGCTCTCCCCAACGTCATGCCCGGCCTTGGGCCGGGCATCCACGAGCTGCAGAGCTCG
ACGCACCAAGAACGTGGATG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter; Twin-Arginine Translocation Pathway Signal; Abc-Type Sugar Transport System Periplasmic Component

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MHSFGNRTLSSRLRLMTMASAAALVAASMTLAAPAWAADDAVLKKWIDEEFQPSTLSKDDQLKELQWFAKAAEPFKGMDI
NVVSETITTHEYEAKTLAKAFSEITGIKLKHDLIQEGDVVEKLQTQMQSGKNVYDGWINDSDLIGTHFRYGQTIALSDYM
TGEGKDVTDPMLDIDDFIGKSFTTAPDKKMYQLPDQQFANLYWFRYDWFTNPDYKAKFKAKYGYELGVPVNWSAYEDIAE
FFTNDIKEINGVKVYGHMDYGKKDPSLGWRFTDAWLSMAGNGDKGLPNGLPVDEWGIRMEGCRPVGSSMERGGDTNGPAA
VYSIVKYLDWMKKYAPPQAQGMTFSESGPVPAQGNVAQQMFWYTAFTADMVKPGLPVVNADGTPKWRMAPSPKGAYWKDG
MKLGYQDVGSGTLLKSTPPDRRKAAWLYLQFITSKTVSLKKSHVGLTFIRESDIWDKSFTERAPKLGGLIEFYRSPARVQ
WSPTGNNIPDYPKLAQLWWQNIGDASSGAKTPQAAMDSLAAAQDSVLERLERSKVQGDCGPKLNKKETAEYWYEKSAKDG
NIAPQRKLANEKPKGETVDYDTLIKSWPASPPKRAEAK

Sequences:

>Translated_598_residues
MHSFGNRTLSSRLRLMTMASAAALVAASMTLAAPAWAADDAVLKKWIDEEFQPSTLSKDDQLKELQWFAKAAEPFKGMDI
NVVSETITTHEYEAKTLAKAFSEITGIKLKHDLIQEGDVVEKLQTQMQSGKNVYDGWINDSDLIGTHFRYGQTIALSDYM
TGEGKDVTDPMLDIDDFIGKSFTTAPDKKMYQLPDQQFANLYWFRYDWFTNPDYKAKFKAKYGYELGVPVNWSAYEDIAE
FFTNDIKEINGVKVYGHMDYGKKDPSLGWRFTDAWLSMAGNGDKGLPNGLPVDEWGIRMEGCRPVGSSMERGGDTNGPAA
VYSIVKYLDWMKKYAPPQAQGMTFSESGPVPAQGNVAQQMFWYTAFTADMVKPGLPVVNADGTPKWRMAPSPKGAYWKDG
MKLGYQDVGSGTLLKSTPPDRRKAAWLYLQFITSKTVSLKKSHVGLTFIRESDIWDKSFTERAPKLGGLIEFYRSPARVQ
WSPTGNNIPDYPKLAQLWWQNIGDASSGAKTPQAAMDSLAAAQDSVLERLERSKVQGDCGPKLNKKETAEYWYEKSAKDG
NIAPQRKLANEKPKGETVDYDTLIKSWPASPPKRAEAK
>Mature_598_residues
MHSFGNRTLSSRLRLMTMASAAALVAASMTLAAPAWAADDAVLKKWIDEEFQPSTLSKDDQLKELQWFAKAAEPFKGMDI
NVVSETITTHEYEAKTLAKAFSEITGIKLKHDLIQEGDVVEKLQTQMQSGKNVYDGWINDSDLIGTHFRYGQTIALSDYM
TGEGKDVTDPMLDIDDFIGKSFTTAPDKKMYQLPDQQFANLYWFRYDWFTNPDYKAKFKAKYGYELGVPVNWSAYEDIAE
FFTNDIKEINGVKVYGHMDYGKKDPSLGWRFTDAWLSMAGNGDKGLPNGLPVDEWGIRMEGCRPVGSSMERGGDTNGPAA
VYSIVKYLDWMKKYAPPQAQGMTFSESGPVPAQGNVAQQMFWYTAFTADMVKPGLPVVNADGTPKWRMAPSPKGAYWKDG
MKLGYQDVGSGTLLKSTPPDRRKAAWLYLQFITSKTVSLKKSHVGLTFIRESDIWDKSFTERAPKLGGLIEFYRSPARVQ
WSPTGNNIPDYPKLAQLWWQNIGDASSGAKTPQAAMDSLAAAQDSVLERLERSKVQGDCGPKLNKKETAEYWYEKSAKDG
NIAPQRKLANEKPKGETVDYDTLIKSWPASPPKRAEAK

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66890; Mature: 66890

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSFGNRTLSSRLRLMTMASAAALVAASMTLAAPAWAADDAVLKKWIDEEFQPSTLSKDD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCH
QLKELQWFAKAAEPFKGMDINVVSETITTHEYEAKTLAKAFSEITGIKLKHDLIQEGDVV
HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHH
EKLQTQMQSGKNVYDGWINDSDLIGTHFRYGQTIALSDYMTGEGKDVTDPMLDIDDFIGK
HHHHHHHHCCCEEECCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCC
SFTTAPDKKMYQLPDQQFANLYWFRYDWFTNPDYKAKFKAKYGYELGVPVNWSAYEDIAE
CCCCCCCCHHHHCCCHHHCCEEEEEEECCCCCCCCEEEEEECCEEECCCCCCHHHHHHHH
FFTNDIKEINGVKVYGHMDYGKKDPSLGWRFTDAWLSMAGNGDKGLPNGLPVDEWGIRME
HHHHHHHHCCCEEEEEECCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCHHHCCEEC
GCRPVGSSMERGGDTNGPAAVYSIVKYLDWMKKYAPPQAQGMTFSESGPVPAQGNVAQQM
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHH
FWYTAFTADMVKPGLPVVNADGTPKWRMAPSPKGAYWKDGMKLGYQDVGSGTLLKSTPPD
HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEECCCCCC
RRKAAWLYLQFITSKTVSLKKSHVGLTFIRESDIWDKSFTERAPKLGGLIEFYRSPARVQ
HHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHCCCCEEE
WSPTGNNIPDYPKLAQLWWQNIGDASSGAKTPQAAMDSLAAAQDSVLERLERSKVQGDCG
ECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PKLNKKETAEYWYEKSAKDGNIAPQRKLANEKPKGETVDYDTLIKSWPASPPKRAEAK
CCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MHSFGNRTLSSRLRLMTMASAAALVAASMTLAAPAWAADDAVLKKWIDEEFQPSTLSKDD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCH
QLKELQWFAKAAEPFKGMDINVVSETITTHEYEAKTLAKAFSEITGIKLKHDLIQEGDVV
HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHH
EKLQTQMQSGKNVYDGWINDSDLIGTHFRYGQTIALSDYMTGEGKDVTDPMLDIDDFIGK
HHHHHHHHCCCEEECCCCCCCCCCCCHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHCC
SFTTAPDKKMYQLPDQQFANLYWFRYDWFTNPDYKAKFKAKYGYELGVPVNWSAYEDIAE
CCCCCCCCHHHHCCCHHHCCEEEEEEECCCCCCCCEEEEEECCEEECCCCCCHHHHHHHH
FFTNDIKEINGVKVYGHMDYGKKDPSLGWRFTDAWLSMAGNGDKGLPNGLPVDEWGIRME
HHHHHHHHCCCEEEEEECCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCHHHCCEEC
GCRPVGSSMERGGDTNGPAAVYSIVKYLDWMKKYAPPQAQGMTFSESGPVPAQGNVAQQM
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHH
FWYTAFTADMVKPGLPVVNADGTPKWRMAPSPKGAYWKDGMKLGYQDVGSGTLLKSTPPD
HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEECCCCCC
RRKAAWLYLQFITSKTVSLKKSHVGLTFIRESDIWDKSFTERAPKLGGLIEFYRSPARVQ
HHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHCCCCEEE
WSPTGNNIPDYPKLAQLWWQNIGDASSGAKTPQAAMDSLAAAQDSVLERLERSKVQGDCG
ECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PKLNKKETAEYWYEKSAKDGNIAPQRKLANEKPKGETVDYDTLIKSWPASPPKRAEAK
CCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA