Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86751297

Identifier: 86751297

GI number: 86751297

Start: 4761847

End: 4762386

Strand: Direct

Name: 86751297

Synonym: RPB_4190

Alternate gene names: NA

Gene position: 4761847-4762386 (Clockwise)

Preceding gene: 86751296

Following gene: 86751298

Centisome position: 89.31

GC content: 64.63

Gene sequence:

>540_bases
ATGAAGCGGTCGGTTGCATTCGGGCTCTGCGCGTTGCCGTTGCTGCTTGCCTCGGCGACAGCCGCGCTTGCCATCGAGCT
GCCGATCCGCAAGGCGGGATTGTGGGAGCTGAAGATGGGCCGGGCAGGCGCAGCGGGCGACGACGTCGCCATGCAGCACT
GCACCGACGAGACCACCGACAAGAAGATGGTCTCGTCGTTCCAGCCGTTGTCCAACGAGGTCTGCTCCAAGCAGGACACC
CAGAAGACCGCCACCGGCTACGTCACCGACGCGGTGTGCAGCATCGCCGGCATGACCACCACGTCGCGGTCCGAGATCAC
CGGCGATTTCAACTCGGCCTATACGGTCAAGGTGACCTCGCACAACGACAAGCCGCTGCCCGGCGTGCCCAAGGACGCCA
CCATGACGCTGGATGCGAAATGGCTCGGCCCCTGCAAGAGCGGCCAGAGGCCCGGCGACATCGTGATGCCCGGCGGCATC
AAGATGAACATCGCCGACATCGAGAAGCTCAAGGCGCTGATGCCGAAACCGCCGAAGTAG

Upstream 100 bases:

>100_bases
GCAGGCCAATTATGGCGGCTACATCTCGTTTGCGTGCCGCTGGGTGCCGTATGGCGCCGACCAGCGGCCGCTGCGCGTCG
CCTACTGAGCGGCGATCCCG

Downstream 100 bases:

>100_bases
CGGCCGGCCTGTGCATCGGCCGGGCATGGGTCCGGTCGAACGGCTCGATCCGTGCGACGCTTGCGCAAATGCAACACTTG
GCGACGATTGTCCCAGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKRSVAFGLCALPLLLASATAALAIELPIRKAGLWELKMGRAGAAGDDVAMQHCTDETTDKKMVSSFQPLSNEVCSKQDT
QKTATGYVTDAVCSIAGMTTTSRSEITGDFNSAYTVKVTSHNDKPLPGVPKDATMTLDAKWLGPCKSGQRPGDIVMPGGI
KMNIADIEKLKALMPKPPK

Sequences:

>Translated_179_residues
MKRSVAFGLCALPLLLASATAALAIELPIRKAGLWELKMGRAGAAGDDVAMQHCTDETTDKKMVSSFQPLSNEVCSKQDT
QKTATGYVTDAVCSIAGMTTTSRSEITGDFNSAYTVKVTSHNDKPLPGVPKDATMTLDAKWLGPCKSGQRPGDIVMPGGI
KMNIADIEKLKALMPKPPK
>Mature_179_residues
MKRSVAFGLCALPLLLASATAALAIELPIRKAGLWELKMGRAGAAGDDVAMQHCTDETTDKKMVSSFQPLSNEVCSKQDT
QKTATGYVTDAVCSIAGMTTTSRSEITGDFNSAYTVKVTSHNDKPLPGVPKDATMTLDAKWLGPCKSGQRPGDIVMPGGI
KMNIADIEKLKALMPKPPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18984; Mature: 18984

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSVAFGLCALPLLLASATAALAIELPIRKAGLWELKMGRAGAAGDDVAMQHCTDETTD
CCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCHH
KKMVSSFQPLSNEVCSKQDTQKTATGYVTDAVCSIAGMTTTSRSEITGDFNSAYTVKVTS
HHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEC
HNDKPLPGVPKDATMTLDAKWLGPCKSGQRPGDIVMPGGIKMNIADIEKLKALMPKPPK
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCEEEHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRSVAFGLCALPLLLASATAALAIELPIRKAGLWELKMGRAGAAGDDVAMQHCTDETTD
CCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCHH
KKMVSSFQPLSNEVCSKQDTQKTATGYVTDAVCSIAGMTTTSRSEITGDFNSAYTVKVTS
HHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEC
HNDKPLPGVPKDATMTLDAKWLGPCKSGQRPGDIVMPGGIKMNIADIEKLKALMPKPPK
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCEEEHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA