Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86751296

Identifier: 86751296

GI number: 86751296

Start: 4761544

End: 4761834

Strand: Direct

Name: 86751296

Synonym: RPB_4189

Alternate gene names: NA

Gene position: 4761544-4761834 (Clockwise)

Preceding gene: 86751291

Following gene: 86751297

Centisome position: 89.31

GC content: 67.01

Gene sequence:

>291_bases
ATGCGAATGCTGAAGGCCGCGGGCCTTGCCGCTCTCTGTGCCGTTCTGTCCGGCACCGCCGCCCGCGCCGACACCGTGCC
GATCGTCAAGGGCAATGATACCGGCGGGATCATCTCCTACAATCTGGTCGGCCACGCCGACGTCCGCGCCATCGCGATCG
ACCATTGCGCGCGCTACGGCAAGGTGGTGAAGCTGCTCGGGGTGCAGGCCAATTATGGCGGCTACATCTCGTTTGCGTGC
CGCTGGGTGCCGTATGGCGCCGACCAGCGGCCGCTGCGCGTCGCCTACTGA

Upstream 100 bases:

>100_bases
GCAGCCACACCTGCGCACATCCCGGCGCGCGAATGTCCGTGCGTTCTTTCCATCGCGGTCGCAACGCTCTAGAATCACAA
GAGCCACGAAGGAGATTCCG

Downstream 100 bases:

>100_bases
GCGGCGATCCCGATGAAGCGGTCGGTTGCATTCGGGCTCTGCGCGTTGCCGTTGCTGCTTGCCTCGGCGACAGCCGCGCT
TGCCATCGAGCTGCCGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MRMLKAAGLAALCAVLSGTAARADTVPIVKGNDTGGIISYNLVGHADVRAIAIDHCARYGKVVKLLGVQANYGGYISFAC
RWVPYGADQRPLRVAY

Sequences:

>Translated_96_residues
MRMLKAAGLAALCAVLSGTAARADTVPIVKGNDTGGIISYNLVGHADVRAIAIDHCARYGKVVKLLGVQANYGGYISFAC
RWVPYGADQRPLRVAY
>Mature_96_residues
MRMLKAAGLAALCAVLSGTAARADTVPIVKGNDTGGIISYNLVGHADVRAIAIDHCARYGKVVKLLGVQANYGGYISFAC
RWVPYGADQRPLRVAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10153; Mature: 10153

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMLKAAGLAALCAVLSGTAARADTVPIVKGNDTGGIISYNLVGHADVRAIAIDHCARYG
CCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCEEHHHHHHHHHH
KVVKLLGVQANYGGYISFACRWVPYGADQRPLRVAY
HEEHHEEECCCCCCEEEEEEEEEECCCCCCCEEECC
>Mature Secondary Structure
MRMLKAAGLAALCAVLSGTAARADTVPIVKGNDTGGIISYNLVGHADVRAIAIDHCARYG
CCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCEEHHHHHHHHHH
KVVKLLGVQANYGGYISFACRWVPYGADQRPLRVAY
HEEHHEEECCCCCCEEEEEEEEEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA