| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86751290
Identifier: 86751290
GI number: 86751290
Start: 4757608
End: 4757937
Strand: Direct
Name: 86751290
Synonym: RPB_4183
Alternate gene names: NA
Gene position: 4757608-4757937 (Clockwise)
Preceding gene: 86751282
Following gene: 86751291
Centisome position: 89.23
GC content: 62.12
Gene sequence:
>330_bases ATGACCACCAAGCCGCTGGCCGAGATGTACGAAGAGCTGAAACAGCTTCGTCGTGAAGGCGATAGCGCGGGACTCGACGC CCTCGTCCGAAAGGCGATGGGCATGGGAATCCCCGGCCTGCCTGAATCGCCCGCCGGTTTCGTTCGACAACTCGATATTC GCGCCCTGGCCGAGCGGGTTTTCGGCGATCCCGCAAGAGCAGAAGGCTGGCTCAACAGGCCTAACACATCACTGAGCGGG CAACGCCCCGCCGACCTTCTGCACGATGACCTCGGAGCCGCGGTCGTTCGCGAGACACTCGAACAGATCGACCATGGGAT CTTCGCTTGA
Upstream 100 bases:
>100_bases CTAAATCTTCACCGGCTTGGGCCGATCGAGGGTCGCCGCGCAAGGCGCCGGTTGCAGAACCACGCCAAAAGACTAATCTA TTGAGGCGTGGAGGGATTTC
Downstream 100 bases:
>100_bases GCGCCGCCGATGGAGCTCTGGCGAATTTCCAATTACGCTGATCTTTCAGGCATCGGCGGCCTCCGAGCGAACGGACGTTG GCACTCGCAGGGCCGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MTTKPLAEMYEELKQLRREGDSAGLDALVRKAMGMGIPGLPESPAGFVRQLDIRALAERVFGDPARAEGWLNRPNTSLSG QRPADLLHDDLGAAVVRETLEQIDHGIFA
Sequences:
>Translated_109_residues MTTKPLAEMYEELKQLRREGDSAGLDALVRKAMGMGIPGLPESPAGFVRQLDIRALAERVFGDPARAEGWLNRPNTSLSG QRPADLLHDDLGAAVVRETLEQIDHGIFA >Mature_108_residues TTKPLAEMYEELKQLRREGDSAGLDALVRKAMGMGIPGLPESPAGFVRQLDIRALAERVFGDPARAEGWLNRPNTSLSGQ RPADLLHDDLGAAVVRETLEQIDHGIFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11895; Mature: 11764
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKPLAEMYEELKQLRREGDSAGLDALVRKAMGMGIPGLPESPAGFVRQLDIRALAERV CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH FGDPARAEGWLNRPNTSLSGQRPADLLHDDLGAAVVRETLEQIDHGIFA HCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTKPLAEMYEELKQLRREGDSAGLDALVRKAMGMGIPGLPESPAGFVRQLDIRALAERV CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH FGDPARAEGWLNRPNTSLSGQRPADLLHDDLGAAVVRETLEQIDHGIFA HCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA