| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ilvE [H]
Identifier: 86751282
GI number: 86751282
Start: 4746044
End: 4747159
Strand: Direct
Name: ilvE [H]
Synonym: RPB_4175
Alternate gene names: 86751282
Gene position: 4746044-4747159 (Clockwise)
Preceding gene: 86751278
Following gene: 86751290
Centisome position: 89.02
GC content: 68.28
Gene sequence:
>1116_bases ATGGGACTCTCGTTCGACAACAAGGTCGACGGCTCGGTCTGGCTGAATTTCGACATTCAGCCGTCGGCGCATCCAGTGTC GGAGACCGAGCGGACCGCGAAGCTCGCGGACCCGGGCTTCGGCCGCGTCTTCACCGACCACATGGCGATCGTCCGCTACG ATCAGGCCAAGGGCTGGTACGGCGCGCGCGTCGAGTCCCGCGCCAATTTCCCGCTCGATCCGGCGACCGCCGTGCTGCAC TACGCGCAGGAGATCTTCGAGGGGCTGAAGGCCTACAAGCGTGCCGATGGCGGCGTGAACCTGTTCCGCCCCGACGCCAA TGCGCGGCGCTTCCGCGATTCCGCCGACCGCATGGCGATGGCGCAGCTTCCCGAGCCGGTGTTCATCGAGGCGATCGAAC AGCTGGTCCGGATCGACCGCGCGTGGATCCCGGGCGGCGACGGCAGCCTGTATCTGCGGCCGTTCATGATCGCCAGCGAG GTGTTCCTCGGCGTCAAGCCGTCGGCCGAATACATCTTCGCGGTGATCGCCTCGCCGGTCGGCTCCTACTTCAAGGGCGG CCCCGCGCCGGTGTCGATCTGGGTGTCGGAGAACTACACCCGCGCCGCGATCGGCGGCACCGGCAGCGTCAAATGCGGCG GCAACTACGCGGCGTCGCTGCGCGCCCAGGCCGAGGCGATCGCGCATGGCTGCGATCAGGTGGTGTTCCTCGACGCGATC GAGCGCCGCTATATCGAGGAACTCGGCGGCATGAACGTGTTCTTCGTGTTCGACGACGGCTCGCTGTCGACGCCGCCGCT CGGCACCATCCTGCCCGGCATCACCCGCGATTCGATCATCGCGCTGGCGCGGCAGGCCGGCCGCACCGTGCGCGAGGAAG CCTACACGATCGAGCAATGGCGCGCCGATGCGGCCAGCGGCAAGCTGAAAGAGGCGTTCGCCTGCGGCACCGCGGCGGTG ATCTCGCCGATCGGCACCGTGCGCTCGGCGAGCGGCGACTTCACCATCAACGGCGGCGTCGCCGGCGAGGTGGCGATGGG CCTGCGCAAGCAGCTCGTCGACATCCAATACGGCCGCGCCGAGGACAAGCACGGCTGGATCAGGGACGTGGCGTAA
Upstream 100 bases:
>100_bases CGGCACGCGGCCGGGGCGCAGCACCATCCAGCGGCCGGCGACAGCCGGGCGCGCACAATGACGGCCACCGGCAGGCGCGC CGATCCAGGAGATCACGTCC
Downstream 100 bases:
>100_bases GCCTTTGCCGCTTTGCTTCTGAATCGTCATCCTGAGGTGCTCGCCCGCAAGGGCGAGCCTCGAAGGATGCGGACGCTCAG TACGCGTGTCCATCCTTCGA
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MGLSFDNKVDGSVWLNFDIQPSAHPVSETERTAKLADPGFGRVFTDHMAIVRYDQAKGWYGARVESRANFPLDPATAVLH YAQEIFEGLKAYKRADGGVNLFRPDANARRFRDSADRMAMAQLPEPVFIEAIEQLVRIDRAWIPGGDGSLYLRPFMIASE VFLGVKPSAEYIFAVIASPVGSYFKGGPAPVSIWVSENYTRAAIGGTGSVKCGGNYAASLRAQAEAIAHGCDQVVFLDAI ERRYIEELGGMNVFFVFDDGSLSTPPLGTILPGITRDSIIALARQAGRTVREEAYTIEQWRADAASGKLKEAFACGTAAV ISPIGTVRSASGDFTINGGVAGEVAMGLRKQLVDIQYGRAEDKHGWIRDVA
Sequences:
>Translated_371_residues MGLSFDNKVDGSVWLNFDIQPSAHPVSETERTAKLADPGFGRVFTDHMAIVRYDQAKGWYGARVESRANFPLDPATAVLH YAQEIFEGLKAYKRADGGVNLFRPDANARRFRDSADRMAMAQLPEPVFIEAIEQLVRIDRAWIPGGDGSLYLRPFMIASE VFLGVKPSAEYIFAVIASPVGSYFKGGPAPVSIWVSENYTRAAIGGTGSVKCGGNYAASLRAQAEAIAHGCDQVVFLDAI ERRYIEELGGMNVFFVFDDGSLSTPPLGTILPGITRDSIIALARQAGRTVREEAYTIEQWRADAASGKLKEAFACGTAAV ISPIGTVRSASGDFTINGGVAGEVAMGLRKQLVDIQYGRAEDKHGWIRDVA >Mature_370_residues GLSFDNKVDGSVWLNFDIQPSAHPVSETERTAKLADPGFGRVFTDHMAIVRYDQAKGWYGARVESRANFPLDPATAVLHY AQEIFEGLKAYKRADGGVNLFRPDANARRFRDSADRMAMAQLPEPVFIEAIEQLVRIDRAWIPGGDGSLYLRPFMIASEV FLGVKPSAEYIFAVIASPVGSYFKGGPAPVSIWVSENYTRAAIGGTGSVKCGGNYAASLRAQAEAIAHGCDQVVFLDAIE RRYIEELGGMNVFFVFDDGSLSTPPLGTILPGITRDSIIALARQAGRTVREEAYTIEQWRADAASGKLKEAFACGTAAVI SPIGTVRSASGDFTINGGVAGEVAMGLRKQLVDIQYGRAEDKHGWIRDVA
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010906, Length=331, Percent_Identity=40.785498489426, Blast_Score=238, Evalue=5e-63, Organism=Homo sapiens, GI38176287, Length=331, Percent_Identity=40.785498489426, Blast_Score=238, Evalue=6e-63, Organism=Homo sapiens, GI296010904, Length=331, Percent_Identity=40.785498489426, Blast_Score=238, Evalue=7e-63, Organism=Homo sapiens, GI50658084, Length=356, Percent_Identity=37.3595505617978, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI296010900, Length=331, Percent_Identity=36.5558912386707, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI296010902, Length=331, Percent_Identity=36.5558912386707, Blast_Score=194, Evalue=9e-50, Organism=Homo sapiens, GI258614015, Length=294, Percent_Identity=37.0748299319728, Blast_Score=179, Evalue=3e-45, Organism=Escherichia coli, GI48994963, Length=325, Percent_Identity=34.1538461538462, Blast_Score=124, Evalue=7e-30, Organism=Caenorhabditis elegans, GI17568601, Length=362, Percent_Identity=35.3591160220994, Blast_Score=220, Evalue=8e-58, Organism=Caenorhabditis elegans, GI17565728, Length=346, Percent_Identity=36.1271676300578, Blast_Score=195, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6322002, Length=347, Percent_Identity=39.4812680115274, Blast_Score=220, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6322608, Length=347, Percent_Identity=38.0403458213257, Blast_Score=214, Evalue=2e-56, Organism=Drosophila melanogaster, GI24641779, Length=338, Percent_Identity=41.4201183431953, Blast_Score=231, Evalue=8e-61,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 40178; Mature: 40047
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSFDNKVDGSVWLNFDIQPSAHPVSETERTAKLADPGFGRVFTDHMAIVRYDQAKGWY CCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHCCEEEEEEECCCCCC GARVESRANFPLDPATAVLHYAQEIFEGLKAYKRADGGVNLFRPDANARRFRDSADRMAM CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH AQLPEPVFIEAIEQLVRIDRAWIPGGDGSLYLRPFMIASEVFLGVKPSAEYIFAVIASPV HHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHH GSYFKGGPAPVSIWVSENYTRAAIGGTGSVKCGGNYAASLRAQAEAIAHGCDQVVFLDAI HHHHCCCCCCEEEEEECCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHH ERRYIEELGGMNVFFVFDDGSLSTPPLGTILPGITRDSIIALARQAGRTVREEAYTIEQW HHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH RADAASGKLKEAFACGTAAVISPIGTVRSASGDFTINGGVAGEVAMGLRKQLVDIQYGRA HHHHCCCCHHHHHHCCHHHHHHCHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCC EDKHGWIRDVA CCCCCCCCCCC >Mature Secondary Structure GLSFDNKVDGSVWLNFDIQPSAHPVSETERTAKLADPGFGRVFTDHMAIVRYDQAKGWY CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHCCEEEEEEECCCCCC GARVESRANFPLDPATAVLHYAQEIFEGLKAYKRADGGVNLFRPDANARRFRDSADRMAM CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHH AQLPEPVFIEAIEQLVRIDRAWIPGGDGSLYLRPFMIASEVFLGVKPSAEYIFAVIASPV HHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHH GSYFKGGPAPVSIWVSENYTRAAIGGTGSVKCGGNYAASLRAQAEAIAHGCDQVVFLDAI HHHHCCCCCCEEEEEECCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHH ERRYIEELGGMNVFFVFDDGSLSTPPLGTILPGITRDSIIALARQAGRTVREEAYTIEQW HHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH RADAASGKLKEAFACGTAAVISPIGTVRSASGDFTINGGVAGEVAMGLRKQLVDIQYGRA HHHHCCCCHHHHHHCCHHHHHHCHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCC EDKHGWIRDVA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]