| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751209
Identifier: 86751209
GI number: 86751209
Start: 4669760
End: 4670932
Strand: Reverse
Name: 86751209
Synonym: RPB_4101
Alternate gene names: NA
Gene position: 4670932-4669760 (Counterclockwise)
Preceding gene: 86751211
Following gene: 86751196
Centisome position: 87.61
GC content: 67.18
Gene sequence:
>1173_bases GTGTTTGAACAGTCATCGACCAGGATCTCCGCCGCGACTTACGGCGCTGTGGTCGCCATTCCTGCTCACAATGAGGCCGA CACGATCCGTCGGTGCCTGGCGGCGCTGGCGATGCAGCGCGACGAGTCCGGTTGCCCGGTGCGCGCCGGGGCATTCGAAA TTCTGATCTACGCCAACAATTGCAGCGACAGCACCGTCGAGGTGGTCCGTCACTTTGCCTGCTGCATTCCGCATCCGATC ATCGTGATCGAAGCACAATTGCCGCCGTCGCAACTCTCGGCCGGCGCGGCACGCAAGACGGCTATGGATCTCGCTGCCGC GAGGCTCGCCGAGCGTGGCGCAGCCGACGGGGTGATCCTCACGACCGATGCAGACAGCTGCGTAGCGCCGACCTGGTTCT CGACGACGATGCGGGAATTGAGCGGCGGTGTGGATTGCGTTGCGGGATACATCGATGCCGAACCGCTCGAACTGGTCGGC CTCGGGCCGGCGTTTCTGGCGCGCGGTCGGCTCGAAGACGCGTATCTGAGATTGATCGCCGAAATCGACGCCCGTTGCGA TCCCCGCCGCCATGATCCCTGGCCGAACCACCGTGTCGCGTCCGGCGCGAGCCTGGCCGTGGTGTTGAAGGCCTATCTGG CCATCGGCGGGTTGCCGCTGCGCGCGGTGGGCGAGGATGCCGCCCTCACCGCTGCGCTCGACCGCGGGGGGTTCAAGGTG CGACATTCCATGGCCGTCTCGGTGACGACGTCGTGCCGGCTCGACGGTCGTGCGCAGGGCGGCGCCGCCGATACGATGCG GCTGCGCCACGCGATGCCGGACGCGCCCTGCGACGACGATCTCGAGCCGGCGTTGCAGGCGACCCGCCGCGCCATCTATC GCGGACGTCTGCGCCGGCTGCTGGACGAACAAAGGTATCGCGCCCGGCAGGTTCAGGATATTCCGGCTCAGCAGCCACCG CGCCCAGGCGCTACGTTCGACGAGGCGTGGCAGCAGCTTTGTCGCGACAATCCGGTTCTTCGCCGCGGCGGGTCGTTGCG ACCGTCCGATCTGCCGCGGCAGATCGCCGTTGCGACCATGGTGCTACGGCATCTGCGGCTGCCGCTCAGTGCGACGACAG TCGTTCCAGCCGATATGTCGCGTCGCGAACGATGGCTCGAGCCGGCAGCCTGA
Upstream 100 bases:
>100_bases GATACGCGAATCGTCGAGAGTTCAGGCGCACGCCGGACGGGAACAGAATCGACATTTGCTGCTTGAATGCATGCCAATTT TTGCATTCAGAGAGACTTCG
Downstream 100 bases:
>100_bases CAGCAACAGCATCCGCGAACTGATCGCTTGCTGCCTGGCCGGTGAGCGGATAATCGGTTTCGCCCAACCAATGGCACATG ATGATCTGGCCGCCGGGACG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase Protein; Family 2 Glycosyl Transferase; Glycosyltransferase
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MFEQSSTRISAATYGAVVAIPAHNEADTIRRCLAALAMQRDESGCPVRAGAFEILIYANNCSDSTVEVVRHFACCIPHPI IVIEAQLPPSQLSAGAARKTAMDLAAARLAERGAADGVILTTDADSCVAPTWFSTTMRELSGGVDCVAGYIDAEPLELVG LGPAFLARGRLEDAYLRLIAEIDARCDPRRHDPWPNHRVASGASLAVVLKAYLAIGGLPLRAVGEDAALTAALDRGGFKV RHSMAVSVTTSCRLDGRAQGGAADTMRLRHAMPDAPCDDDLEPALQATRRAIYRGRLRRLLDEQRYRARQVQDIPAQQPP RPGATFDEAWQQLCRDNPVLRRGGSLRPSDLPRQIAVATMVLRHLRLPLSATTVVPADMSRRERWLEPAA
Sequences:
>Translated_390_residues MFEQSSTRISAATYGAVVAIPAHNEADTIRRCLAALAMQRDESGCPVRAGAFEILIYANNCSDSTVEVVRHFACCIPHPI IVIEAQLPPSQLSAGAARKTAMDLAAARLAERGAADGVILTTDADSCVAPTWFSTTMRELSGGVDCVAGYIDAEPLELVG LGPAFLARGRLEDAYLRLIAEIDARCDPRRHDPWPNHRVASGASLAVVLKAYLAIGGLPLRAVGEDAALTAALDRGGFKV RHSMAVSVTTSCRLDGRAQGGAADTMRLRHAMPDAPCDDDLEPALQATRRAIYRGRLRRLLDEQRYRARQVQDIPAQQPP RPGATFDEAWQQLCRDNPVLRRGGSLRPSDLPRQIAVATMVLRHLRLPLSATTVVPADMSRRERWLEPAA >Mature_390_residues MFEQSSTRISAATYGAVVAIPAHNEADTIRRCLAALAMQRDESGCPVRAGAFEILIYANNCSDSTVEVVRHFACCIPHPI IVIEAQLPPSQLSAGAARKTAMDLAAARLAERGAADGVILTTDADSCVAPTWFSTTMRELSGGVDCVAGYIDAEPLELVG LGPAFLARGRLEDAYLRLIAEIDARCDPRRHDPWPNHRVASGASLAVVLKAYLAIGGLPLRAVGEDAALTAALDRGGFKV RHSMAVSVTTSCRLDGRAQGGAADTMRLRHAMPDAPCDDDLEPALQATRRAIYRGRLRRLLDEQRYRARQVQDIPAQQPP RPGATFDEAWQQLCRDNPVLRRGGSLRPSDLPRQIAVATMVLRHLRLPLSATTVVPADMSRRERWLEPAA
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42237; Mature: 42237
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEQSSTRISAATYGAVVAIPAHNEADTIRRCLAALAMQRDESGCPVRAGAFEILIYANN CCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEECC CSDSTVEVVRHFACCIPHPIIVIEAQLPPSQLSAGAARKTAMDLAAARLAERGAADGVIL CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEE TTDADSCVAPTWFSTTMRELSGGVDCVAGYIDAEPLELVGLGPAFLARGRLEDAYLRLIA EECCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCHHHHHCCCHHHHHHHHHH EIDARCDPRRHDPWPNHRVASGASLAVVLKAYLAIGGLPLRAVGEDAALTAALDRGGFKV HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCEEE RHSMAVSVTTSCRLDGRAQGGAADTMRLRHAMPDAPCDDDLEPALQATRRAIYRGRLRRL EEEEEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LDEQRYRARQVQDIPAQQPPRPGATFDEAWQQLCRDNPVLRRGGSLRPSDLPRQIAVATM HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHH VLRHLRLPLSATTVVPADMSRRERWLEPAA HHHHHCCCCCCEEECCCCHHHHHHHCCCCC >Mature Secondary Structure MFEQSSTRISAATYGAVVAIPAHNEADTIRRCLAALAMQRDESGCPVRAGAFEILIYANN CCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEECC CSDSTVEVVRHFACCIPHPIIVIEAQLPPSQLSAGAARKTAMDLAAARLAERGAADGVIL CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEE TTDADSCVAPTWFSTTMRELSGGVDCVAGYIDAEPLELVGLGPAFLARGRLEDAYLRLIA EECCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCHHHHHCCCHHHHHHHHHH EIDARCDPRRHDPWPNHRVASGASLAVVLKAYLAIGGLPLRAVGEDAALTAALDRGGFKV HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCEEE RHSMAVSVTTSCRLDGRAQGGAADTMRLRHAMPDAPCDDDLEPALQATRRAIYRGRLRRL EEEEEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LDEQRYRARQVQDIPAQQPPRPGATFDEAWQQLCRDNPVLRRGGSLRPSDLPRQIAVATM HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHH VLRHLRLPLSATTVVPADMSRRERWLEPAA HHHHHCCCCCCEEECCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA