| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751189
Identifier: 86751189
GI number: 86751189
Start: 4652826
End: 4653530
Strand: Reverse
Name: 86751189
Synonym: RPB_4081
Alternate gene names: NA
Gene position: 4653530-4652826 (Counterclockwise)
Preceding gene: 86751190
Following gene: 86751186
Centisome position: 87.28
GC content: 67.8
Gene sequence:
>705_bases ATGACGCAAATCCCCCGCTACGCCATCTATTATCTGCCGCCGCCCGGCAGCGTGCTCGACCGGTTCGGGTCCGCGCTGCT CGGCTACGACGTTGTCACCGGCGCCGAACCACCGTTTCCTGAGGCGATGACGCGCGCCGTGCCTGACTGGGCCGCCATCA CCCGCGAGCCGCGCAAATACGGCTTCCACGCCACGCTGAAGGCGCCGATCGCTTTGGCGGCAGGCCAGAGCGAGGCGGAG CTGCTGTGGGCCTGCGCCACCTTCGCCGAGACGCCGCGGGCGATCCCCGTCATCGCGCCGGTGGTCCAGTCGATCGGCAG CTTCATCGCGGTGGTGCCTTCAGCGCCCTCGGACGAGCTCGTGCAACTCGCGACCGATTGCGTGCGCAGTTTCGACACCT TCCGCGCGCCGCTGACAGCGGCCGATCGGGCGCGCAGGAAGCCGGCGCAATTGACGCCCCGGCAGATCCAATATCTCGAT CATTGGGGTTACCCCTATGTGATCGAGGAATTCCGCTTCCACATGACGCTGACCGGCTCGCTCGACCGCGTGCGGCACGT CGAGCTGCTCGGCCTGCTGCGCCAACAGTTCGACGTGCTTGATCTCGGGACGCTGGCGATCGACCGGATCGCGGTGTGCC GGCAGGACAGCGCCGGCGAGCGGTTCCGCAGCATCGGCCAGTTTCAACTGCGGCCGATGCCGTGA
Upstream 100 bases:
>100_bases GCGGCTCGTTCATCTCGACGAGCCGGAGCGCTTCGTGATGTCGCACAAGGCCGCGCACGAGACGGTTGCCGCGGCCTGAG ACGAGGCTATCCTGTCCGCG
Downstream 100 bases:
>100_bases AGCGTTGCGGCACGAGGGTCAGCTCACGCGGCGTTCGCGGTTCTCCCAATAGGGCTGTCGCAATTCGCGCTTGAGGATCT TGCCGGCGCCCGACAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase; Conserved Hypothethical Protein DUF
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTQIPRYAIYYLPPPGSVLDRFGSALLGYDVVTGAEPPFPEAMTRAVPDWAAITREPRKYGFHATLKAPIALAAGQSEAE LLWACATFAETPRAIPVIAPVVQSIGSFIAVVPSAPSDELVQLATDCVRSFDTFRAPLTAADRARRKPAQLTPRQIQYLD HWGYPYVIEEFRFHMTLTGSLDRVRHVELLGLLRQQFDVLDLGTLAIDRIAVCRQDSAGERFRSIGQFQLRPMP
Sequences:
>Translated_234_residues MTQIPRYAIYYLPPPGSVLDRFGSALLGYDVVTGAEPPFPEAMTRAVPDWAAITREPRKYGFHATLKAPIALAAGQSEAE LLWACATFAETPRAIPVIAPVVQSIGSFIAVVPSAPSDELVQLATDCVRSFDTFRAPLTAADRARRKPAQLTPRQIQYLD HWGYPYVIEEFRFHMTLTGSLDRVRHVELLGLLRQQFDVLDLGTLAIDRIAVCRQDSAGERFRSIGQFQLRPMP >Mature_233_residues TQIPRYAIYYLPPPGSVLDRFGSALLGYDVVTGAEPPFPEAMTRAVPDWAAITREPRKYGFHATLKAPIALAAGQSEAEL LWACATFAETPRAIPVIAPVVQSIGSFIAVVPSAPSDELVQLATDCVRSFDTFRAPLTAADRARRKPAQLTPRQIQYLDH WGYPYVIEEFRFHMTLTGSLDRVRHVELLGLLRQQFDVLDLGTLAIDRIAVCRQDSAGERFRSIGQFQLRPMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26025; Mature: 25894
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIPRYAIYYLPPPGSVLDRFGSALLGYDVVTGAEPPFPEAMTRAVPDWAAITREPRKY CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHCCCHHHH GFHATLKAPIALAAGQSEAELLWACATFAETPRAIPVIAPVVQSIGSFIAVVPSAPSDEL CCEEEECCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEECCCCCHHHH VQLATDCVRSFDTFRAPLTAADRARRKPAQLTPRQIQYLDHWGYPYVIEEFRFHMTLTGS HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHEEEEEEEECC LDRVRHVELLGLLRQQFDVLDLGTLAIDRIAVCRQDSAGERFRSIGQFQLRPMP HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCC >Mature Secondary Structure TQIPRYAIYYLPPPGSVLDRFGSALLGYDVVTGAEPPFPEAMTRAVPDWAAITREPRKY CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHCCCHHHH GFHATLKAPIALAAGQSEAELLWACATFAETPRAIPVIAPVVQSIGSFIAVVPSAPSDEL CCEEEECCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEECCCCCHHHH VQLATDCVRSFDTFRAPLTAADRARRKPAQLTPRQIQYLDHWGYPYVIEEFRFHMTLTGS HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHEEEEEEEECC LDRVRHVELLGLLRQQFDVLDLGTLAIDRIAVCRQDSAGERFRSIGQFQLRPMP HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA