Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751189

Identifier: 86751189

GI number: 86751189

Start: 4652826

End: 4653530

Strand: Reverse

Name: 86751189

Synonym: RPB_4081

Alternate gene names: NA

Gene position: 4653530-4652826 (Counterclockwise)

Preceding gene: 86751190

Following gene: 86751186

Centisome position: 87.28

GC content: 67.8

Gene sequence:

>705_bases
ATGACGCAAATCCCCCGCTACGCCATCTATTATCTGCCGCCGCCCGGCAGCGTGCTCGACCGGTTCGGGTCCGCGCTGCT
CGGCTACGACGTTGTCACCGGCGCCGAACCACCGTTTCCTGAGGCGATGACGCGCGCCGTGCCTGACTGGGCCGCCATCA
CCCGCGAGCCGCGCAAATACGGCTTCCACGCCACGCTGAAGGCGCCGATCGCTTTGGCGGCAGGCCAGAGCGAGGCGGAG
CTGCTGTGGGCCTGCGCCACCTTCGCCGAGACGCCGCGGGCGATCCCCGTCATCGCGCCGGTGGTCCAGTCGATCGGCAG
CTTCATCGCGGTGGTGCCTTCAGCGCCCTCGGACGAGCTCGTGCAACTCGCGACCGATTGCGTGCGCAGTTTCGACACCT
TCCGCGCGCCGCTGACAGCGGCCGATCGGGCGCGCAGGAAGCCGGCGCAATTGACGCCCCGGCAGATCCAATATCTCGAT
CATTGGGGTTACCCCTATGTGATCGAGGAATTCCGCTTCCACATGACGCTGACCGGCTCGCTCGACCGCGTGCGGCACGT
CGAGCTGCTCGGCCTGCTGCGCCAACAGTTCGACGTGCTTGATCTCGGGACGCTGGCGATCGACCGGATCGCGGTGTGCC
GGCAGGACAGCGCCGGCGAGCGGTTCCGCAGCATCGGCCAGTTTCAACTGCGGCCGATGCCGTGA

Upstream 100 bases:

>100_bases
GCGGCTCGTTCATCTCGACGAGCCGGAGCGCTTCGTGATGTCGCACAAGGCCGCGCACGAGACGGTTGCCGCGGCCTGAG
ACGAGGCTATCCTGTCCGCG

Downstream 100 bases:

>100_bases
AGCGTTGCGGCACGAGGGTCAGCTCACGCGGCGTTCGCGGTTCTCCCAATAGGGCTGTCGCAATTCGCGCTTGAGGATCT
TGCCGGCGCCCGACAGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase; Conserved Hypothethical Protein DUF

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTQIPRYAIYYLPPPGSVLDRFGSALLGYDVVTGAEPPFPEAMTRAVPDWAAITREPRKYGFHATLKAPIALAAGQSEAE
LLWACATFAETPRAIPVIAPVVQSIGSFIAVVPSAPSDELVQLATDCVRSFDTFRAPLTAADRARRKPAQLTPRQIQYLD
HWGYPYVIEEFRFHMTLTGSLDRVRHVELLGLLRQQFDVLDLGTLAIDRIAVCRQDSAGERFRSIGQFQLRPMP

Sequences:

>Translated_234_residues
MTQIPRYAIYYLPPPGSVLDRFGSALLGYDVVTGAEPPFPEAMTRAVPDWAAITREPRKYGFHATLKAPIALAAGQSEAE
LLWACATFAETPRAIPVIAPVVQSIGSFIAVVPSAPSDELVQLATDCVRSFDTFRAPLTAADRARRKPAQLTPRQIQYLD
HWGYPYVIEEFRFHMTLTGSLDRVRHVELLGLLRQQFDVLDLGTLAIDRIAVCRQDSAGERFRSIGQFQLRPMP
>Mature_233_residues
TQIPRYAIYYLPPPGSVLDRFGSALLGYDVVTGAEPPFPEAMTRAVPDWAAITREPRKYGFHATLKAPIALAAGQSEAEL
LWACATFAETPRAIPVIAPVVQSIGSFIAVVPSAPSDELVQLATDCVRSFDTFRAPLTAADRARRKPAQLTPRQIQYLDH
WGYPYVIEEFRFHMTLTGSLDRVRHVELLGLLRQQFDVLDLGTLAIDRIAVCRQDSAGERFRSIGQFQLRPMP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26025; Mature: 25894

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIPRYAIYYLPPPGSVLDRFGSALLGYDVVTGAEPPFPEAMTRAVPDWAAITREPRKY
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHCCCHHHH
GFHATLKAPIALAAGQSEAELLWACATFAETPRAIPVIAPVVQSIGSFIAVVPSAPSDEL
CCEEEECCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEECCCCCHHHH
VQLATDCVRSFDTFRAPLTAADRARRKPAQLTPRQIQYLDHWGYPYVIEEFRFHMTLTGS
HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHEEEEEEEECC
LDRVRHVELLGLLRQQFDVLDLGTLAIDRIAVCRQDSAGERFRSIGQFQLRPMP
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCC
>Mature Secondary Structure 
TQIPRYAIYYLPPPGSVLDRFGSALLGYDVVTGAEPPFPEAMTRAVPDWAAITREPRKY
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHCCCHHHH
GFHATLKAPIALAAGQSEAELLWACATFAETPRAIPVIAPVVQSIGSFIAVVPSAPSDEL
CCEEEECCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEECCCCCHHHH
VQLATDCVRSFDTFRAPLTAADRARRKPAQLTPRQIQYLDHWGYPYVIEEFRFHMTLTGS
HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHEEEEEEEECC
LDRVRHVELLGLLRQQFDVLDLGTLAIDRIAVCRQDSAGERFRSIGQFQLRPMP
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA