| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fabG1 [H]
Identifier: 86751183
GI number: 86751183
Start: 4647546
End: 4648373
Strand: Reverse
Name: fabG1 [H]
Synonym: RPB_4075
Alternate gene names: 86751183
Gene position: 4648373-4647546 (Counterclockwise)
Preceding gene: 86751184
Following gene: 86751182
Centisome position: 87.18
GC content: 66.18
Gene sequence:
>828_bases ATGGCCAAACTGCAAGGCAAGGTGGCGCTCGTCACCGGATCGGGACGCGGCATCGGCCGCGCCATTGCGTTGAAGCTCGC CTCCGAAGGGGCGCGGGTCGTGGTCAACGACCTCGACGACGCGCCGGGCGACGCGGTCGCGGCCGAGATCATCGCGGCCG GCGGCGAGGCGATCGCGATCAACGGCAGTGTGTCCGAACCGGGCTTCGCCGATCGCTTCGTCGGCGCCGCGGTCGACAAA TTCGGCGGCCTCGACATCATCGTCAACAACGCCGGCTACACTTGGGATTCGACGATCCAGAAGATGACCGACGAGCAGTT CCAGGCGATGCTCGACGTGCATCTGGTGGCGCCGTTCCGCATCCTGCGCGCGGCCGCCGAGCCGATCCGCATCTTCGCCA AGAAGGAGGCCGAAGCCGGGCGCGAGGTGTTCCGCAAGGTGGTCAACATCTCGTCGATCGCGGGGCTCTACGGCAATGCC GGCCAGGCGAGTTATTCCTCCGCCAAGGCATCGCTGGTCGGATTGACGCGGACGCTGTGCAAGGAATGGGGGCGCTACAA GGTCAACGTCAATTGCGTCGCCTTCGGCCTGATCAACACGCGTCTGACGCAACCGATCGAGGCGCAGCAGACCACCATCG ACGTCGCCGGCCGCGACATCAAGGTCGGCGTCCAGCCGCAGATGCTCGACGCCATGGCGCGGATGATCCCGCTCGGGCGT GGCGGCACGCCGGAGGAGGCGGCCGACGCGGTGTATCTGTTCTGCAGCCCGGAATCGAACTACATCAGTGGTCAGGTCGT CGTCTGCGGCGGCGGACTTATTCTGTAG
Upstream 100 bases:
>100_bases GCCAGGCTGACACTCACCACCAAGGACCAGCACGGCGAGACCAAACTCGCCGGCGAGGCCGTGGTCGCTCTCTCATAACA ACTCCGTTCAAGGACATCTC
Downstream 100 bases:
>100_bases CGAGGAAAAATGCAGTATCGATCGCCCTGGATGACCGAGGAACTGGACACGTTCCGTGACCAGTTTCGCAAGTTCTTGGA GAAGGACCTTGCGCCGCACG
Product: 3-oxoacyl-acyl carrier protein reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase 1 [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MAKLQGKVALVTGSGRGIGRAIALKLASEGARVVVNDLDDAPGDAVAAEIIAAGGEAIAINGSVSEPGFADRFVGAAVDK FGGLDIIVNNAGYTWDSTIQKMTDEQFQAMLDVHLVAPFRILRAAAEPIRIFAKKEAEAGREVFRKVVNISSIAGLYGNA GQASYSSAKASLVGLTRTLCKEWGRYKVNVNCVAFGLINTRLTQPIEAQQTTIDVAGRDIKVGVQPQMLDAMARMIPLGR GGTPEEAADAVYLFCSPESNYISGQVVVCGGGLIL
Sequences:
>Translated_275_residues MAKLQGKVALVTGSGRGIGRAIALKLASEGARVVVNDLDDAPGDAVAAEIIAAGGEAIAINGSVSEPGFADRFVGAAVDK FGGLDIIVNNAGYTWDSTIQKMTDEQFQAMLDVHLVAPFRILRAAAEPIRIFAKKEAEAGREVFRKVVNISSIAGLYGNA GQASYSSAKASLVGLTRTLCKEWGRYKVNVNCVAFGLINTRLTQPIEAQQTTIDVAGRDIKVGVQPQMLDAMARMIPLGR GGTPEEAADAVYLFCSPESNYISGQVVVCGGGLIL >Mature_274_residues AKLQGKVALVTGSGRGIGRAIALKLASEGARVVVNDLDDAPGDAVAAEIIAAGGEAIAINGSVSEPGFADRFVGAAVDKF GGLDIIVNNAGYTWDSTIQKMTDEQFQAMLDVHLVAPFRILRAAAEPIRIFAKKEAEAGREVFRKVVNISSIAGLYGNAG QASYSSAKASLVGLTRTLCKEWGRYKVNVNCVAFGLINTRLTQPIEAQQTTIDVAGRDIKVGVQPQMLDAMARMIPLGRG GTPEEAADAVYLFCSPESNYISGQVVVCGGGLIL
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=282, Percent_Identity=32.6241134751773, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI4504505, Length=213, Percent_Identity=37.5586854460094, Blast_Score=124, Evalue=6e-29, Organism=Homo sapiens, GI32483357, Length=273, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI40254992, Length=269, Percent_Identity=30.8550185873606, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI19923817, Length=274, Percent_Identity=26.6423357664234, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI5031737, Length=272, Percent_Identity=29.4117647058824, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI126723750, Length=278, Percent_Identity=28.0575539568345, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI126723191, Length=198, Percent_Identity=33.8383838383838, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI4758504, Length=279, Percent_Identity=27.5985663082437, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI59889578, Length=248, Percent_Identity=28.6290322580645, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI10190704, Length=275, Percent_Identity=28.7272727272727, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI33667109, Length=219, Percent_Identity=31.0502283105023, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI83715985, Length=188, Percent_Identity=31.3829787234043, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI32455239, Length=204, Percent_Identity=30.8823529411765, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI5031765, Length=204, Percent_Identity=30.8823529411765, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI7705925, Length=270, Percent_Identity=27.4074074074074, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI31542939, Length=213, Percent_Identity=29.1079812206573, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI66933014, Length=285, Percent_Identity=23.859649122807, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI4503301, Length=271, Percent_Identity=27.3062730627306, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI224922801, Length=178, Percent_Identity=30.3370786516854, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1787335, Length=273, Percent_Identity=32.6007326007326, Blast_Score=144, Evalue=5e-36, Organism=Escherichia coli, GI87082100, Length=277, Percent_Identity=28.8808664259928, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI87082160, Length=273, Percent_Identity=29.3040293040293, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1789208, Length=278, Percent_Identity=26.978417266187, Blast_Score=104, Evalue=7e-24, Organism=Escherichia coli, GI1787905, Length=270, Percent_Identity=28.1481481481481, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI2367175, Length=268, Percent_Identity=30.2238805970149, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1790717, Length=273, Percent_Identity=25.2747252747253, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1789378, Length=273, Percent_Identity=31.1355311355311, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788459, Length=273, Percent_Identity=28.2051282051282, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789057, Length=273, Percent_Identity=27.8388278388278, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI2367365, Length=274, Percent_Identity=27.007299270073, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17555706, Length=270, Percent_Identity=32.962962962963, Blast_Score=136, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17568967, Length=217, Percent_Identity=35.9447004608295, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI25147288, Length=275, Percent_Identity=33.0909090909091, Blast_Score=127, Evalue=7e-30, Organism=Caenorhabditis elegans, GI17562910, Length=284, Percent_Identity=31.6901408450704, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17560676, Length=271, Percent_Identity=29.1512915129151, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562906, Length=280, Percent_Identity=30, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17561402, Length=278, Percent_Identity=28.0575539568345, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17538486, Length=284, Percent_Identity=29.5774647887324, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17560150, Length=284, Percent_Identity=31.3380281690141, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17562908, Length=283, Percent_Identity=27.9151943462898, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17559104, Length=284, Percent_Identity=29.2253521126761, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17562990, Length=282, Percent_Identity=30.4964539007092, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17560332, Length=280, Percent_Identity=28.9285714285714, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17531453, Length=279, Percent_Identity=27.9569892473118, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538480, Length=278, Percent_Identity=28.7769784172662, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17544670, Length=280, Percent_Identity=27.5, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17563726, Length=286, Percent_Identity=29.3706293706294, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17562904, Length=289, Percent_Identity=26.2975778546713, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17538182, Length=280, Percent_Identity=29.2857142857143, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17536025, Length=276, Percent_Identity=26.8115942028986, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI193204405, Length=288, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71994604, Length=268, Percent_Identity=27.6119402985075, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17536651, Length=276, Percent_Identity=25.7246376811594, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17560220, Length=282, Percent_Identity=26.9503546099291, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI72000259, Length=285, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71994600, Length=269, Percent_Identity=27.8810408921933, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17508895, Length=179, Percent_Identity=29.608938547486, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI193203117, Length=215, Percent_Identity=29.7674418604651, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI193203115, Length=214, Percent_Identity=29.4392523364486, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17564282, Length=200, Percent_Identity=27.5, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17508651, Length=268, Percent_Identity=27.9850746268657, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17551412, Length=282, Percent_Identity=26.9503546099291, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17565030, Length=290, Percent_Identity=27.9310344827586, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI115534694, Length=269, Percent_Identity=27.1375464684015, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17567345, Length=179, Percent_Identity=26.8156424581006, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=212, Percent_Identity=39.1509433962264, Blast_Score=142, Evalue=7e-35, Organism=Saccharomyces cerevisiae, GI6324126, Length=275, Percent_Identity=25.8181818181818, Blast_Score=65, Evalue=8e-12, Organism=Drosophila melanogaster, GI24639444, Length=272, Percent_Identity=31.9852941176471, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI18859837, Length=200, Percent_Identity=35.5, Blast_Score=110, Evalue=8e-25, Organism=Drosophila melanogaster, GI21355319, Length=274, Percent_Identity=29.9270072992701, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI17737361, Length=284, Percent_Identity=27.8169014084507, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24644339, Length=269, Percent_Identity=27.8810408921933, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI28571526, Length=273, Percent_Identity=26.007326007326, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI23397609, Length=269, Percent_Identity=30.1115241635688, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24643142, Length=270, Percent_Identity=28.1481481481481, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI21357041, Length=275, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24640492, Length=179, Percent_Identity=26.8156424581006, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 28844; Mature: 28713
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLQGKVALVTGSGRGIGRAIALKLASEGARVVVNDLDDAPGDAVAAEIIAAGGEAIAI CCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEE NGSVSEPGFADRFVGAAVDKFGGLDIIVNNAGYTWDSTIQKMTDEQFQAMLDVHLVAPFR ECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILRAAAEPIRIFAKKEAEAGREVFRKVVNISSIAGLYGNAGQASYSSAKASLVGLTRTLC HHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH KEWGRYKVNVNCVAFGLINTRLTQPIEAQQTTIDVAGRDIKVGVQPQMLDAMARMIPLGR HHCCCEEEEEEEEEEEEEHHHCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHCCCCC GGTPEEAADAVYLFCSPESNYISGQVVVCGGGLIL CCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCC >Mature Secondary Structure AKLQGKVALVTGSGRGIGRAIALKLASEGARVVVNDLDDAPGDAVAAEIIAAGGEAIAI CCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEE NGSVSEPGFADRFVGAAVDKFGGLDIIVNNAGYTWDSTIQKMTDEQFQAMLDVHLVAPFR ECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILRAAAEPIRIFAKKEAEAGREVFRKVVNISSIAGLYGNAGQASYSSAKASLVGLTRTLC HHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH KEWGRYKVNVNCVAFGLINTRLTQPIEAQQTTIDVAGRDIKVGVQPQMLDAMARMIPLGR HHCCCEEEEEEEEEEEEEHHHCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHCCCCC GGTPEEAADAVYLFCSPESNYISGQVVVCGGGLIL CCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]