Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is arcA [C]

Identifier: 86751149

GI number: 86751149

Start: 4611840

End: 4612214

Strand: Reverse

Name: arcA [C]

Synonym: RPB_4041

Alternate gene names: 86751149

Gene position: 4612214-4611840 (Counterclockwise)

Preceding gene: 86751150

Following gene: 86751148

Centisome position: 86.51

GC content: 63.47

Gene sequence:

>375_bases
ATGCACCGATCGATGAGCACCAAATTGGTCGTCCTCGTCGTCGAAGACGAAGCACTACTGCGCATGAACGCGATCGACAT
GATCGAGGACGCCGGATTCGAGGTGCTCGAGGCGAGCAATGCCGACGACGCGATCGCGATTCTCGAGGGCCGCGACGACA
TCCGGGTCGTGTTCACCGACATCCAGATGCCGGGTTCGATGGATGGGCTGAAGCTGGCCCGCGCGGTGCGGGGCCGCTGG
CCGCCGATCAAGATCATCGCCACCTCGGGCCGGGTCAACGTGTCCAGCACCGACCTGCCGGACGGCGGACGGTTTCTGGC
GAAGCCTTATACGTCGCGCGATGTGACGAACCTGCTCACGGAAATCACCGCCTGA

Upstream 100 bases:

>100_bases
CCGAGGCGGTCGGAAGTACACAGGTGGATTTACCAATGTCGCCTGAAACCGGAACGATCGGGCGCTGTAACCTTTGACTG
ACCTCACACGAGGTTGAAGG

Downstream 100 bases:

>100_bases
GGGGAATTTCTGCCTGACGGAAGCCTGATGGGATGCCGCGGCCGGCCCGGTTTCGGGTTTTGCGCTGCAGCGAAAGTCGC
GGTTTCCAAAATTTAATCTA

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: Response Regulator Receiver; Response Regulator; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator Protein; Periplasmic Sensor Hybrid Histidine Kinase; Two Component Response Regulator; GAF Sensor Hybrid Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; Two-Component Sensor Histidine Kinase Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Chemotaxis Response Regulator; Two Component Sensor Kinase/Response Regulator Hybrid

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MHRSMSTKLVVLVVEDEALLRMNAIDMIEDAGFEVLEASNADDAIAILEGRDDIRVVFTDIQMPGSMDGLKLARAVRGRW
PPIKIIATSGRVNVSSTDLPDGGRFLAKPYTSRDVTNLLTEITA

Sequences:

>Translated_124_residues
MHRSMSTKLVVLVVEDEALLRMNAIDMIEDAGFEVLEASNADDAIAILEGRDDIRVVFTDIQMPGSMDGLKLARAVRGRW
PPIKIIATSGRVNVSSTDLPDGGRFLAKPYTSRDVTNLLTEITA
>Mature_124_residues
MHRSMSTKLVVLVVEDEALLRMNAIDMIEDAGFEVLEASNADDAIAILEGRDDIRVVFTDIQMPGSMDGLKLARAVRGRW
PPIKIIATSGRVNVSSTDLPDGGRFLAKPYTSRDVTNLLTEITA

Specific function: Member Of The Two-Component Regulatory System Arcb/Arca. Represses A Wide Variety Of Aerobic Enzymes Under Anaerobic Conditions. Controls The Resistance Of E.Coli To Dyes; Required For Expression Of The Alkaline Phosphatase And Sex Factor F Genes; It Als

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13558; Mature: 13558

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRSMSTKLVVLVVEDEALLRMNAIDMIEDAGFEVLEASNADDAIAILEGRDDIRVVFTD
CCCCCCCEEEEEEECCCCEEEHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCEEEEEEE
IQMPGSMDGLKLARAVRGRWPPIKIIATSGRVNVSSTDLPDGGRFLAKPYTSRDVTNLLT
CCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCEEEECCCCCCHHHHHHH
EITA
HHCC
>Mature Secondary Structure
MHRSMSTKLVVLVVEDEALLRMNAIDMIEDAGFEVLEASNADDAIAILEGRDDIRVVFTD
CCCCCCCEEEEEEECCCCEEEHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCEEEEEEE
IQMPGSMDGLKLARAVRGRWPPIKIIATSGRVNVSSTDLPDGGRFLAKPYTSRDVTNLLT
CCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCEEEECCCCCCHHHHHHH
EITA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA