Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86751127

Identifier: 86751127

GI number: 86751127

Start: 4586924

End: 4588237

Strand: Direct

Name: 86751127

Synonym: RPB_4019

Alternate gene names: NA

Gene position: 4586924-4588237 (Clockwise)

Preceding gene: 86751123

Following gene: 86751128

Centisome position: 86.03

GC content: 67.05

Gene sequence:

>1314_bases
ATGACGGCTGAAGTTCTGATCGGTGATGGCGATGGTAGACTTTCGCCGCATCCACTGCGGGCGGCCGTCTTGGGCGAGGT
TCACGCGCGCCCGTTCACTGCGCTCGCAGTGCCGGCGCGGGTGCTGCATTTCGCGTTCGACACCTCGGGCGAGAAGGCCA
AGGCCGATCGCATCGCGCTGACGAAATTCTGCGAATCACGCGGGCTGCAGCCGCCGCCGTCCAACGAGAAGCATCACCGC
GCCTCGTTCGGCACGACCATGCTGCGCTGGGAACAGCATTCCGAATTCACCACCTACACCTGGGAATTCACCGCCGACCC
GGTCGCGATGCCGTTTCATCCGGAGGCCTCGTCGCTGGCTTCGCCGATGCGGCTGGTGCCCCAGCCCGGGCCGTTGCTGG
TCGCGGTCGATCTGCATGCGCTGCCGGACGATCCGCCGCGCACCGCGCCGGAGCGATTGTTCGATCGCGCCAGCCTCGCT
GTCGCGGAGAATTCCGACGGCGCGGCGGTCTATGCCACCGATTTCCAGCCCGGTCCCTCGGGCTTCGTGCGGGTGCTGGT
GATCGATCGCGGCATGGCGCCGGAGCGCGCCGGAGCGCTGGTGCAGCGTGTGCTCGAAATCGAGACCTATCGCACGCTGG
CGCTGCTCGGCCTGCCGGAAGCGCAGCGGCTCGGTCCCTCGATCAGCAACGGCGAGCGCCGCCTCGCCGAAGTCACCGCC
GAAATGCGCAAGGCGGCCGATCTCGCCATCAACAACAGACTGCTGCAGGAACTGACCGAACTCGCCGCCGAGGTCGAAGC
CGGCGCCGCCGCCAGTCTGGGCCGCTTCAGCGCCAGCCGCGCCTATGAAGAGATCATGACCGGCCGGCTGGCGACGCTCG
GCGAACGCAAGGTCGGCGGCCTGCCGACCTGGTCGTCGTTCCTCGCCCGCCGGATGAAGCCGGCGATGCGCACCTGCACC
ACCACCGAGGCGCGACAATCCGACCTGTCGCTGAAACTCGCCCGCGCCGCCAACCTGCTGCGAACCCGCGTCGACGTCGA
GCTCGAACATCAGAATCAAGAGCTGCTGAAATCGATGAACGCGCGGACGCGGCTGCAATTGCGGCTGCAGGCCACCGTCG
AAGGCCTCTCCACCGCGGCGATCACCTACTACGTGGTCGGGCTGTTCGGTTATTTGGTGAAGGGTCTGCACGATTCCGGC
CAGATCACGGTCGAGCCGAGCCTCGTCACCGCGGGTTTCGTGCCGATCGCCGCGTTCTCGATCTGGTGGACGGTGCGCAG
CATCCGCAGGAAACACATCGCGAGCGAGGATTGA

Upstream 100 bases:

>100_bases
TTGACGCTGCCTGCGCAGGTAAAACCTTTCGGCTTCTGTCCATCGCGCTGCAATGCTACTCAAGTCAACCAGCGCAATGT
TGAGCAAGGTCAAACCCCCT

Downstream 100 bases:

>100_bases
TGACCATCGCCGCCAGGTCGACACTCGCGCGGCTGCTCGTCGCCCTCGTCGCGGTGATCGCGATCGCCACCGCCTTGTGG
CAATTGCATCGCGCCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MTAEVLIGDGDGRLSPHPLRAAVLGEVHARPFTALAVPARVLHFAFDTSGEKAKADRIALTKFCESRGLQPPPSNEKHHR
ASFGTTMLRWEQHSEFTTYTWEFTADPVAMPFHPEASSLASPMRLVPQPGPLLVAVDLHALPDDPPRTAPERLFDRASLA
VAENSDGAAVYATDFQPGPSGFVRVLVIDRGMAPERAGALVQRVLEIETYRTLALLGLPEAQRLGPSISNGERRLAEVTA
EMRKAADLAINNRLLQELTELAAEVEAGAAASLGRFSASRAYEEIMTGRLATLGERKVGGLPTWSSFLARRMKPAMRTCT
TTEARQSDLSLKLARAANLLRTRVDVELEHQNQELLKSMNARTRLQLRLQATVEGLSTAAITYYVVGLFGYLVKGLHDSG
QITVEPSLVTAGFVPIAAFSIWWTVRSIRRKHIASED

Sequences:

>Translated_437_residues
MTAEVLIGDGDGRLSPHPLRAAVLGEVHARPFTALAVPARVLHFAFDTSGEKAKADRIALTKFCESRGLQPPPSNEKHHR
ASFGTTMLRWEQHSEFTTYTWEFTADPVAMPFHPEASSLASPMRLVPQPGPLLVAVDLHALPDDPPRTAPERLFDRASLA
VAENSDGAAVYATDFQPGPSGFVRVLVIDRGMAPERAGALVQRVLEIETYRTLALLGLPEAQRLGPSISNGERRLAEVTA
EMRKAADLAINNRLLQELTELAAEVEAGAAASLGRFSASRAYEEIMTGRLATLGERKVGGLPTWSSFLARRMKPAMRTCT
TTEARQSDLSLKLARAANLLRTRVDVELEHQNQELLKSMNARTRLQLRLQATVEGLSTAAITYYVVGLFGYLVKGLHDSG
QITVEPSLVTAGFVPIAAFSIWWTVRSIRRKHIASED
>Mature_436_residues
TAEVLIGDGDGRLSPHPLRAAVLGEVHARPFTALAVPARVLHFAFDTSGEKAKADRIALTKFCESRGLQPPPSNEKHHRA
SFGTTMLRWEQHSEFTTYTWEFTADPVAMPFHPEASSLASPMRLVPQPGPLLVAVDLHALPDDPPRTAPERLFDRASLAV
AENSDGAAVYATDFQPGPSGFVRVLVIDRGMAPERAGALVQRVLEIETYRTLALLGLPEAQRLGPSISNGERRLAEVTAE
MRKAADLAINNRLLQELTELAAEVEAGAAASLGRFSASRAYEEIMTGRLATLGERKVGGLPTWSSFLARRMKPAMRTCTT
TEARQSDLSLKLARAANLLRTRVDVELEHQNQELLKSMNARTRLQLRLQATVEGLSTAAITYYVVGLFGYLVKGLHDSGQ
ITVEPSLVTAGFVPIAAFSIWWTVRSIRRKHIASED

Specific function: Unknown

COG id: COG4949

COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47786; Mature: 47655

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEVLIGDGDGRLSPHPLRAAVLGEVHARPFTALAVPARVLHFAFDTSGEKAKADRIAL
CCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TKFCESRGLQPPPSNEKHHRASFGTTMLRWEQHSEFTTYTWEFTADPVAMPFHPEASSLA
HHHHHHCCCCCCCCCCCCHHHHHCCHHEEECCCCCEEEEEEEEECCCEECCCCCCHHHHC
SPMRLVPQPGPLLVAVDLHALPDDPPRTAPERLFDRASLAVAENSDGAAVYATDFQPGPS
CCHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHEEEEECCCCCEEEEECCCCCCC
GFVRVLVIDRGMAPERAGALVQRVLEIETYRTLALLGLPEAQRLGPSISNGERRLAEVTA
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCCCCCHHHHHHHHHH
EMRKAADLAINNRLLQELTELAAEVEAGAAASLGRFSASRAYEEIMTGRLATLGERKVGG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LPTWSSFLARRMKPAMRTCTTTEARQSDLSLKLARAANLLRTRVDVELEHQNQELLKSMN
CCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHCC
ARTRLQLRLQATVEGLSTAAITYYVVGLFGYLVKGLHDSGQITVEPSLVTAGFVPIAAFS
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHCHHHHHHHH
IWWTVRSIRRKHIASED
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TAEVLIGDGDGRLSPHPLRAAVLGEVHARPFTALAVPARVLHFAFDTSGEKAKADRIAL
CCEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TKFCESRGLQPPPSNEKHHRASFGTTMLRWEQHSEFTTYTWEFTADPVAMPFHPEASSLA
HHHHHHCCCCCCCCCCCCHHHHHCCHHEEECCCCCEEEEEEEEECCCEECCCCCCHHHHC
SPMRLVPQPGPLLVAVDLHALPDDPPRTAPERLFDRASLAVAENSDGAAVYATDFQPGPS
CCHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHEEEEECCCCCEEEEECCCCCCC
GFVRVLVIDRGMAPERAGALVQRVLEIETYRTLALLGLPEAQRLGPSISNGERRLAEVTA
CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCCCCCHHHHHHHHHH
EMRKAADLAINNRLLQELTELAAEVEAGAAASLGRFSASRAYEEIMTGRLATLGERKVGG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LPTWSSFLARRMKPAMRTCTTTEARQSDLSLKLARAANLLRTRVDVELEHQNQELLKSMN
CCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHCC
ARTRLQLRLQATVEGLSTAAITYYVVGLFGYLVKGLHDSGQITVEPSLVTAGFVPIAAFS
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHCHHHHHHHH
IWWTVRSIRRKHIASED
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA