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The map label for this gene is crtJ [H]

Identifier: 86751101

GI number: 86751101

Start: 4560114

End: 4561547

Strand: Reverse

Name: crtJ [H]

Synonym: RPB_3993

Alternate gene names: 86751101

Gene position: 4561547-4560114 (Counterclockwise)

Preceding gene: 86751102

Following gene: 86751100

Centisome position: 85.56

GC content: 64.99

Gene sequence:

>1434_bases
GTGCAAGTGTTCAAATCTCCGAAGGAGTCGCTGGGGGATCTCGGTGCCCAGTCTGCCGCCAAGCTGATCGCCGCTGCGAC
CGATGTCGCGCTGGTCGTCGATTCGCAGGGCGTGATCCGGGACGTGGCGTTCAACAAGGACGAACTGGCTCTCGAACTGG
ACGGCCAGGGCCGTTGGCTCGAGTCCCGGCTGGTCGACATCGTGACCTCCGACACTCAGCCGAAAATTCGCGAGCTGTTG
CTCGACGCGACCGTGCGTGACGCGCCGACCTGGCGTCAGGTCAACCATCCCTCGCCGGGCGGCGACGACGTGCCGGTGCT
GTACTCGGCCATCAATTACGGGCCCGACGATCGCCTGCTGGTGGTCGGCCGTGATCTGCGTCAACTCGCGATGATGCAAC
AGCGTCTAATCAACGCCCAGCAGTCGATGGAGCGAGACTACATCCGGCTGCGGCACGCCGAAACGCGGTACCGGCTGCTG
TTTCAGGTCTCGTCGGAAGCCGTCATGATCGTCGACGCGAGCAGCGAATTGATCGTGGATGCCAACCCGGCGACGCTGGC
GCTGTTCGACATGACTGCAGCGCAGACATTGAATTCGGCGGTCATCGGCCATTTCGGCAGCGCCGACCAGCAGGTCGTGA
TGAAATTGTTCGGCGAGGTCCGCACCACCGGCCGGGACGGCCGCGCCAAAGTGCGACTCGCCAGCAGCGGCCGCGAGTGC
GAATTGTCGGCGTCCTTGTTCAGGCAAGAGAACGCCTCGCTGTTCCTGGTCCGCCTGACATCGCAATCGGCCGTGCCGGA
AAGCGGCGCCGCGAAGAATGCGTCGTTGCTGCTGAAGTACTTCGAGGCCGGCGCCGACGCGCTGGTCATCACCCAGTTCG
ACGGACGCGTCATTCGGGCCAATCTCGCCTTTCTGGAAATGGCGCAACTCGGCAGCGCCGAGCAGGCGCGCGGCCAATTG
CTCGACCGTTGGCTCGGCCGGACCGGCGTCGATCTCAGCGTCGCGCTGGCCAATTTGCGGCAGAGCGGCGCCATCAAACT
GTTCGCAACCGTGCTGCGCGGCGAGTACGGCGCTGCCGCCGAAGTCGAGGTCTCGGCGGTCGCGCTGAACGACATCGAGG
ACAAGCCGTGCTTCGGCTTCGCGATCCGCAACGTCGAGAAGCGGTTGCCCGCGTCGCCGAGTTCGAAGCGGGAACTGCCG
CGCTCGGTGGCCCAACTCACCGAACTGATCGGCCGGGTGCCGCTGCGCGACCTCGTGCGCGAAACCACCGATGTGATCGA
AAAGCTGTCGATCGAGGCGGCGCTGGAGCTGACCGGCGACAACCGGGCGTCGGCGGCCGACATGCTGGGTCTCAGCCGTC
AAAGCCTGTATGTGAAATTGCGTCGCTACGGCCTCGCGGAACACGCGCCGGAGGGAGAGGCTGCAGATGAATAA

Upstream 100 bases:

>100_bases
ACGGAGCCAGCCAGAGGGCTTCGGATCAGTAGAGACCCGACTTGTTTGGACGCAGACGCCGGAGTGGAGGACGAGTTTTT
GCAGGAGGATATTTGCCCTG

Downstream 100 bases:

>100_bases
GACCGATGCGACGCGGATGAGTAACGCCATGATCACGCGTCCGGCGCCATCGGCGGTGCTCGAGGTGCTTCACCCCATCA
CCTGGTTTCCGCCGATGTGG

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MQVFKSPKESLGDLGAQSAAKLIAAATDVALVVDSQGVIRDVAFNKDELALELDGQGRWLESRLVDIVTSDTQPKIRELL
LDATVRDAPTWRQVNHPSPGGDDVPVLYSAINYGPDDRLLVVGRDLRQLAMMQQRLINAQQSMERDYIRLRHAETRYRLL
FQVSSEAVMIVDASSELIVDANPATLALFDMTAAQTLNSAVIGHFGSADQQVVMKLFGEVRTTGRDGRAKVRLASSGREC
ELSASLFRQENASLFLVRLTSQSAVPESGAAKNASLLLKYFEAGADALVITQFDGRVIRANLAFLEMAQLGSAEQARGQL
LDRWLGRTGVDLSVALANLRQSGAIKLFATVLRGEYGAAAEVEVSAVALNDIEDKPCFGFAIRNVEKRLPASPSSKRELP
RSVAQLTELIGRVPLRDLVRETTDVIEKLSIEAALELTGDNRASAADMLGLSRQSLYVKLRRYGLAEHAPEGEAADE

Sequences:

>Translated_477_residues
MQVFKSPKESLGDLGAQSAAKLIAAATDVALVVDSQGVIRDVAFNKDELALELDGQGRWLESRLVDIVTSDTQPKIRELL
LDATVRDAPTWRQVNHPSPGGDDVPVLYSAINYGPDDRLLVVGRDLRQLAMMQQRLINAQQSMERDYIRLRHAETRYRLL
FQVSSEAVMIVDASSELIVDANPATLALFDMTAAQTLNSAVIGHFGSADQQVVMKLFGEVRTTGRDGRAKVRLASSGREC
ELSASLFRQENASLFLVRLTSQSAVPESGAAKNASLLLKYFEAGADALVITQFDGRVIRANLAFLEMAQLGSAEQARGQL
LDRWLGRTGVDLSVALANLRQSGAIKLFATVLRGEYGAAAEVEVSAVALNDIEDKPCFGFAIRNVEKRLPASPSSKRELP
RSVAQLTELIGRVPLRDLVRETTDVIEKLSIEAALELTGDNRASAADMLGLSRQSLYVKLRRYGLAEHAPEGEAADE
>Mature_477_residues
MQVFKSPKESLGDLGAQSAAKLIAAATDVALVVDSQGVIRDVAFNKDELALELDGQGRWLESRLVDIVTSDTQPKIRELL
LDATVRDAPTWRQVNHPSPGGDDVPVLYSAINYGPDDRLLVVGRDLRQLAMMQQRLINAQQSMERDYIRLRHAETRYRLL
FQVSSEAVMIVDASSELIVDANPATLALFDMTAAQTLNSAVIGHFGSADQQVVMKLFGEVRTTGRDGRAKVRLASSGREC
ELSASLFRQENASLFLVRLTSQSAVPESGAAKNASLLLKYFEAGADALVITQFDGRVIRANLAFLEMAQLGSAEQARGQL
LDRWLGRTGVDLSVALANLRQSGAIKLFATVLRGEYGAAAEVEVSAVALNDIEDKPCFGFAIRNVEKRLPASPSSKRELP
RSVAQLTELIGRVPLRDLVRETTDVIEKLSIEAALELTGDNRASAADMLGLSRQSLYVKLRRYGLAEHAPEGEAADE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR000014
- InterPro:   IPR011785 [H]

Pfam domain/function: PF02954 HTH_8 [H]

EC number: NA

Molecular weight: Translated: 51958; Mature: 51958

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVFKSPKESLGDLGAQSAAKLIAAATDVALVVDSQGVIRDVAFNKDELALELDGQGRWL
CCCCCCHHHHHHHCCHHHHHHHHHHHCCEEEEECCCCHHHHHCCCCCCEEEEECCCCCCH
ESRLVDIVTSDTQPKIRELLLDATVRDAPTWRQVNHPSPGGDDVPVLYSAINYGPDDRLL
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEE
VVGRDLRQLAMMQQRLINAQQSMERDYIRLRHAETRYRLLFQVSSEAVMIVDASSELIVD
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEECCCEEEEEECCCCEEEE
ANPATLALFDMTAAQTLNSAVIGHFGSADQQVVMKLFGEVRTTGRDGRAKVRLASSGREC
CCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCE
ELSASLFRQENASLFLVRLTSQSAVPESGAAKNASLLLKYFEAGADALVITQFDGRVIRA
EHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEEE
NLAFLEMAQLGSAEQARGQLLDRWLGRTGVDLSVALANLRQSGAIKLFATVLRGEYGAAA
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCC
EVEVSAVALNDIEDKPCFGFAIRNVEKRLPASPSSKRELPRSVAQLTELIGRVPLRDLVR
EEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
ETTDVIEKLSIEAALELTGDNRASAADMLGLSRQSLYVKLRRYGLAEHAPEGEAADE
HHHHHHHHHHHHEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCCCC
>Mature Secondary Structure
MQVFKSPKESLGDLGAQSAAKLIAAATDVALVVDSQGVIRDVAFNKDELALELDGQGRWL
CCCCCCHHHHHHHCCHHHHHHHHHHHCCEEEEECCCCHHHHHCCCCCCEEEEECCCCCCH
ESRLVDIVTSDTQPKIRELLLDATVRDAPTWRQVNHPSPGGDDVPVLYSAINYGPDDRLL
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEE
VVGRDLRQLAMMQQRLINAQQSMERDYIRLRHAETRYRLLFQVSSEAVMIVDASSELIVD
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEECCCEEEEEECCCCEEEE
ANPATLALFDMTAAQTLNSAVIGHFGSADQQVVMKLFGEVRTTGRDGRAKVRLASSGREC
CCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCE
ELSASLFRQENASLFLVRLTSQSAVPESGAAKNASLLLKYFEAGADALVITQFDGRVIRA
EHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEEE
NLAFLEMAQLGSAEQARGQLLDRWLGRTGVDLSVALANLRQSGAIKLFATVLRGEYGAAA
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCC
EVEVSAVALNDIEDKPCFGFAIRNVEKRLPASPSSKRELPRSVAQLTELIGRVPLRDLVR
EEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
ETTDVIEKLSIEAALELTGDNRASAADMLGLSRQSLYVKLRRYGLAEHAPEGEAADE
HHHHHHHHHHHHEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA