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The map label for this gene is cycA [H]

Identifier: 86751095

GI number: 86751095

Start: 4555272

End: 4555691

Strand: Direct

Name: cycA [H]

Synonym: RPB_3987

Alternate gene names: 86751095

Gene position: 4555272-4555691 (Clockwise)

Preceding gene: 86751092

Following gene: 86751113

Centisome position: 85.44

GC content: 61.19

Gene sequence:

>420_bases
GTGGTCCGAAAATTTCTCGCAATTGTCACCATCACCGCTGCCGCAGGATCTCTGTCGACAGGTATCGCCTCGGCGCAGGA
CGCCGCCAAGGGCGAAGCGGTGTTCAAGCAGTGCATGACCTGCCATCGTGCCGACAAGAATATGGTCGGACCGGCCCTCG
GCGGCGCCGTCGGCCGTAAGGCGGGCACGGCTGCCGGCTTCACCTATTCGCCGCTGAACCACAATTCCGGCGAAGCCGGT
CTGGTCTGGACCCAGGAAAACATCGTGGCCTACCTGCCGGATCCGAATGCCTTCCTGAAGAAGTTCCTCACCGACAAGGG
CCAGGCCGACAAGGCCGTCGGTTCGACCAAGATGACCTTCAAACTGGCCAACGAACAGCAGCGCAAGGATGTTGCGGCGT
ATCTCGCCACGCTGAAGTAA

Upstream 100 bases:

>100_bases
TTTACAGGCCACTTTAGAACGGGTTTGGATAGGGCTGTTGTCCGGCCCCGCAGAGGGCCTGATTCCGTTGGGCGTAACGA
CGAGATCTATGGAGAGAGAC

Downstream 100 bases:

>100_bases
GCTGGACTGATCTCTCTGATTGATTGCTGCTGACGCGAAAGCCCTGGTTCTGATCCTCAGAACCGGGGCTTTTGCTTTTT
CTGCCCTTGCGCTGGGTTCG

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MVRKFLAIVTITAAAGSLSTGIASAQDAAKGEAVFKQCMTCHRADKNMVGPALGGAVGRKAGTAAGFTYSPLNHNSGEAG
LVWTQENIVAYLPDPNAFLKKFLTDKGQADKAVGSTKMTFKLANEQQRKDVAAYLATLK

Sequences:

>Translated_139_residues
MVRKFLAIVTITAAAGSLSTGIASAQDAAKGEAVFKQCMTCHRADKNMVGPALGGAVGRKAGTAAGFTYSPLNHNSGEAG
LVWTQENIVAYLPDPNAFLKKFLTDKGQADKAVGSTKMTFKLANEQQRKDVAAYLATLK
>Mature_139_residues
MVRKFLAIVTITAAAGSLSTGIASAQDAAKGEAVFKQCMTCHRADKNMVGPALGGAVGRKAGTAAGFTYSPLNHNSGEAG
LVWTQENIVAYLPDPNAFLKKFLTDKGQADKAVGSTKMTFKLANEQQRKDVAAYLATLK

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17539604, Length=115, Percent_Identity=35.6521739130435, Blast_Score=69, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17566554, Length=91, Percent_Identity=37.3626373626374, Blast_Score=66, Evalue=7e-12,
Organism=Drosophila melanogaster, GI17137204, Length=118, Percent_Identity=37.2881355932203, Blast_Score=70, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 14594; Mature: 14594

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRKFLAIVTITAAAGSLSTGIASAQDAAKGEAVFKQCMTCHRADKNMVGPALGGAVGRK
CHHHHEEHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC
AGTAAGFTYSPLNHNSGEAGLVWTQENIVAYLPDPNAFLKKFLTDKGQADKAVGSTKMTF
CCCCCCCEECCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCCCHHCCCCEEEE
KLANEQQRKDVAAYLATLK
EECCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVRKFLAIVTITAAAGSLSTGIASAQDAAKGEAVFKQCMTCHRADKNMVGPALGGAVGRK
CHHHHEEHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC
AGTAAGFTYSPLNHNSGEAGLVWTQENIVAYLPDPNAFLKKFLTDKGQADKAVGSTKMTF
CCCCCCCEECCCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHCCCCCCHHCCCCEEEE
KLANEQQRKDVAAYLATLK
EECCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 221822 [H]