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The map label for this gene is pbsA1 [H]

Identifier: 86751092

GI number: 86751092

Start: 4550654

End: 4551337

Strand: Direct

Name: pbsA1 [H]

Synonym: RPB_3984

Alternate gene names: 86751092

Gene position: 4550654-4551337 (Clockwise)

Preceding gene: 86751091

Following gene: 86751095

Centisome position: 85.35

GC content: 66.08

Gene sequence:

>684_bases
ATGGTCTCAGTCACCGCGGTCAGCGACGAGCCGAGTGTCGTCACCGCTCTTTACCTTCGCACCAAAGCTCTGCACCTCGA
AGCCGAGCGCACCGGCATCGTGGCCGATATCTTGCGCGGAGCCGCGAGCCGTGACGGATACGTCCTGCTGATGCGCAATC
TGCATCCGGCCTATCGCGAGCTCGAGGACGGGATCGAACGCCATCGCAACAGCCCAATTCTCGCGCCGCTGGCGCGATGG
TGCCTGGCGCGAACATCCGCAATCGCAGCGGATCTGACGGCGCTGGCTGGTCCGAACTGGGCGGAGCAATGGCCGCTTCT
GCCGGAGGGCGAGGCCTATGCCCGCACGATCACGCTTGCGGCCGAGGGCGACGGCAGTCGGTTGATCGCCCACGCCTACA
CACGCTATCTCGGCGATCTCAACGGCGGCCAGATCGTGCGCCGCCTGCTCGAAAAGTCGCTCGGACTCGGCGCGTCCGAA
CTTTCACATTACGACTTCTCCGCGATTGCCGAGCCGGCGACGCTGAAGTCCGACTATCGCCAGGCGCTGGAACGGGCCGG
AGCGGCGGCCGCCGCCTCCGACGCAATCGTCAAGGAGGGGGCGCACGCCTTCGAATGCAACATTGCCCTGTCGGTCGCCG
TCCAACGGCGTTTGGCGGACACCCTGGTGCCACGACCGTCTTAG

Upstream 100 bases:

>100_bases
AGAACTGGTGATTGCCTTGAAAGGCGAAGATTCACTGTGACGGATATTCGCGCCCCTGCTTCCGCACTGCTATAAGGCGG
CGTCAAGCCGGGGAACCGAA

Downstream 100 bases:

>100_bases
TGCAGCTTCGGATCCGGAGCCCGGGCCTTGATGGGATCAGGCCGGCCGCCCCCATCCCTAGCTGTTGGACTTGTTGTTTC
TTGTCGTGTTGTCGTTCCCG

Product: Heme oxygenase (decyclizing)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MVSVTAVSDEPSVVTALYLRTKALHLEAERTGIVADILRGAASRDGYVLLMRNLHPAYRELEDGIERHRNSPILAPLARW
CLARTSAIAADLTALAGPNWAEQWPLLPEGEAYARTITLAAEGDGSRLIAHAYTRYLGDLNGGQIVRRLLEKSLGLGASE
LSHYDFSAIAEPATLKSDYRQALERAGAAAAASDAIVKEGAHAFECNIALSVAVQRRLADTLVPRPS

Sequences:

>Translated_227_residues
MVSVTAVSDEPSVVTALYLRTKALHLEAERTGIVADILRGAASRDGYVLLMRNLHPAYRELEDGIERHRNSPILAPLARW
CLARTSAIAADLTALAGPNWAEQWPLLPEGEAYARTITLAAEGDGSRLIAHAYTRYLGDLNGGQIVRRLLEKSLGLGASE
LSHYDFSAIAEPATLKSDYRQALERAGAAAAASDAIVKEGAHAFECNIALSVAVQRRLADTLVPRPS
>Mature_227_residues
MVSVTAVSDEPSVVTALYLRTKALHLEAERTGIVADILRGAASRDGYVLLMRNLHPAYRELEDGIERHRNSPILAPLARW
CLARTSAIAADLTALAGPNWAEQWPLLPEGEAYARTITLAAEGDGSRLIAHAYTRYLGDLNGGQIVRRLLEKSLGLGASE
LSHYDFSAIAEPATLKSDYRQALERAGAAAAASDAIVKEGAHAFECNIALSVAVQRRLADTLVPRPS

Specific function: Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennas. Upon overexpression in E.coli with PCB:ferredoxin oxidoreductase, CpeS and either CpcB or PecB permits sy

COG id: COG5398

COG function: function code P; Heme oxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme oxygenase family [H]

Homologues:

Organism=Homo sapiens, GI4504437, Length=211, Percent_Identity=34.5971563981043, Blast_Score=124, Evalue=6e-29,
Organism=Homo sapiens, GI187761311, Length=193, Percent_Identity=31.0880829015544, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI187761309, Length=193, Percent_Identity=31.0880829015544, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI187761307, Length=193, Percent_Identity=31.0880829015544, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI8051608, Length=193, Percent_Identity=31.0880829015544, Blast_Score=105, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002051
- InterPro:   IPR016053
- InterPro:   IPR016084
- InterPro:   IPR018207 [H]

Pfam domain/function: PF01126 Heme_oxygenase [H]

EC number: =1.14.99.3 [H]

Molecular weight: Translated: 24437; Mature: 24437

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00593 HEME_OXYGENASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVTAVSDEPSVVTALYLRTKALHLEAERTGIVADILRGAASRDGYVLLMRNLHPAYRE
CEEEEEECCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
LEDGIERHRNSPILAPLARWCLARTSAIAADLTALAGPNWAEQWPLLPEGEAYARTITLA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEEE
AEGDGSRLIAHAYTRYLGDLNGGQIVRRLLEKSLGLGASELSHYDFSAIAEPATLKSDYR
ECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCHHHHHHHH
QALERAGAAAAASDAIVKEGAHAFECNIALSVAVQRRLADTLVPRPS
HHHHHCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVSVTAVSDEPSVVTALYLRTKALHLEAERTGIVADILRGAASRDGYVLLMRNLHPAYRE
CEEEEEECCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
LEDGIERHRNSPILAPLARWCLARTSAIAADLTALAGPNWAEQWPLLPEGEAYARTITLA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEEE
AEGDGSRLIAHAYTRYLGDLNGGQIVRRLLEKSLGLGASELSHYDFSAIAEPATLKSDYR
ECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCHHHHHHHH
QALERAGAAAAASDAIVKEGAHAFECNIALSVAVQRRLADTLVPRPS
HHHHHCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]