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The map label for this gene is crtJ [H]

Identifier: 86751094

GI number: 86751094

Start: 4553594

End: 4554955

Strand: Reverse

Name: crtJ [H]

Synonym: RPB_3986

Alternate gene names: 86751094

Gene position: 4554955-4553594 (Counterclockwise)

Preceding gene: 86751096

Following gene: 86751093

Centisome position: 85.43

GC content: 63.36

Gene sequence:

>1362_bases
ATGTCTGCAAAACCCGCCCAACCCGACATCACCCTCCTTCTGGATATGGATGGCGTGATCCGCGACGCTTCCCTTTCACC
GGCTCTGGCCGGGGAAAGTGTTCAGGGTTGGCTCGGCCAAGCCTGGACCGATGTTGCCGGCGATGATGGTGGCGACAAGG
TCCGGCGCATGGTCGAGGATGCCCGGACCAGCGGAATCTCTGCATTTCGGCAGGTAAATCAACGATTTCCGTCCGGCGCC
GAGCTCCCGATCGAATTCACCACCATGCTACTCGGTGATCGCACCGGACTGCTCGCGGTGGGCAAGAACCTGCAGGCGGT
GACCGAACTGCATGCGCGACTGATTGCGGCGCAACAAACGATCGAGCGCGACTACTGGCGGCTGCGTGAAATGGAAACGC
GTTATCGGCTGGTATTCGACGCTGCAACCGAAGCGGTGATGATCGTCTCGGCGCACGATCTCCGGATCGTCGAGGCCAAT
CGGGCCGCGGTGCAGGCCCTCAGCGGGGTCGACCGTGACAACGAGGATGTCACCGGCCGCGAGATCTTGAACGAGGTTGC
GCAGCTCGACCGCGATGCGGTTCGCGAAATGCTGGCGCGGGTCCGTGATCGCGGCAAAGCGCTGAGCATCCTCGTGCATA
TCGGCCGCGATGCGCGGCCATGGATGTTGCGTGGCTCGCTGGTGTCGTCGGAACAAGGGCAGGTGTTCCTGCTGCAATTC
TCACCGGTCGCCACGACTTCGCGGGACGACGAACGCGCCGAGCCGACCGTGCTCAAGACGCTGATCGACCGGGTGCCGGA
CGGCTTCGTCGCGCTCGACGCCGGCGGCGTCATCCGCCACGCCAATCAGGCCTTTCTGGACCTCGTCCAGATCGGCTCGA
AGGGATCCGCGATCGGCGAATCGCTCGGTCGTTGGCTCAATCAGCCCGGTGCAGACCTCGCGGCGCTGATGTCGCATCTG
CAGCGCTACAAGACCGTGCGGCTGTTTCAGACCTCCATTCGCGGCGAACTCGGGAGCGAGACGGATGTCGAGATCTCGGC
GGTCGACGGCGACGACCACAACTACCTCGGTGTACTGATCAGGAATGTGTCGCGGCGTCTCGGCGGCGGCGAAAGCGATG
CACTACGCTCGGCGCTCGGCCCGATCAGCAAGCAGCTCGGCCGCTCTTCGCTGAGAAAGCTGGTCAAGAATACCGTAGGC
ATCGTCGAACGCCACTATGTCAAGGAAGCGCTGGAACTCACCAAGGGCAACCGCACGGCCACTGCCGAACTGCTGGGGTT
GAGCCGGCAAAGTCTCTATGCCAAGCTCGCGCGCTATGGGCTCGACGACAAGGGTGCCGTCTCCCAAAACGCCGAGGACT
GA

Upstream 100 bases:

>100_bases
CGCTTCCACTTGTCATTGGCACGCTGTCTGCATAATTGCTGCAGAGCGTACCGTTCGACTGCGTCTCGGGGACGCCGAAC
CGCCGCTCGCGAGTGGATCG

Downstream 100 bases:

>100_bases
GTGACGGCTGAAGCGACGATCTCCCCCGCATTCGGAACCGCCGATCTTTCGAACTGCGAGCAGGAGCAAATTCATCTTGC
CGGTTCGATTCAGCCGCACG

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MSAKPAQPDITLLLDMDGVIRDASLSPALAGESVQGWLGQAWTDVAGDDGGDKVRRMVEDARTSGISAFRQVNQRFPSGA
ELPIEFTTMLLGDRTGLLAVGKNLQAVTELHARLIAAQQTIERDYWRLREMETRYRLVFDAATEAVMIVSAHDLRIVEAN
RAAVQALSGVDRDNEDVTGREILNEVAQLDRDAVREMLARVRDRGKALSILVHIGRDARPWMLRGSLVSSEQGQVFLLQF
SPVATTSRDDERAEPTVLKTLIDRVPDGFVALDAGGVIRHANQAFLDLVQIGSKGSAIGESLGRWLNQPGADLAALMSHL
QRYKTVRLFQTSIRGELGSETDVEISAVDGDDHNYLGVLIRNVSRRLGGGESDALRSALGPISKQLGRSSLRKLVKNTVG
IVERHYVKEALELTKGNRTATAELLGLSRQSLYAKLARYGLDDKGAVSQNAED

Sequences:

>Translated_453_residues
MSAKPAQPDITLLLDMDGVIRDASLSPALAGESVQGWLGQAWTDVAGDDGGDKVRRMVEDARTSGISAFRQVNQRFPSGA
ELPIEFTTMLLGDRTGLLAVGKNLQAVTELHARLIAAQQTIERDYWRLREMETRYRLVFDAATEAVMIVSAHDLRIVEAN
RAAVQALSGVDRDNEDVTGREILNEVAQLDRDAVREMLARVRDRGKALSILVHIGRDARPWMLRGSLVSSEQGQVFLLQF
SPVATTSRDDERAEPTVLKTLIDRVPDGFVALDAGGVIRHANQAFLDLVQIGSKGSAIGESLGRWLNQPGADLAALMSHL
QRYKTVRLFQTSIRGELGSETDVEISAVDGDDHNYLGVLIRNVSRRLGGGESDALRSALGPISKQLGRSSLRKLVKNTVG
IVERHYVKEALELTKGNRTATAELLGLSRQSLYAKLARYGLDDKGAVSQNAED
>Mature_452_residues
SAKPAQPDITLLLDMDGVIRDASLSPALAGESVQGWLGQAWTDVAGDDGGDKVRRMVEDARTSGISAFRQVNQRFPSGAE
LPIEFTTMLLGDRTGLLAVGKNLQAVTELHARLIAAQQTIERDYWRLREMETRYRLVFDAATEAVMIVSAHDLRIVEANR
AAVQALSGVDRDNEDVTGREILNEVAQLDRDAVREMLARVRDRGKALSILVHIGRDARPWMLRGSLVSSEQGQVFLLQFS
PVATTSRDDERAEPTVLKTLIDRVPDGFVALDAGGVIRHANQAFLDLVQIGSKGSAIGESLGRWLNQPGADLAALMSHLQ
RYKTVRLFQTSIRGELGSETDVEISAVDGDDHNYLGVLIRNVSRRLGGGESDALRSALGPISKQLGRSSLRKLVKNTVGI
VERHYVKEALELTKGNRTATAELLGLSRQSLYAKLARYGLDDKGAVSQNAED

Specific function: Member Of The Two-Component Regulatory System Atos/Atoc Involved In The Transcriptional Regulation Of The Ato Genes For Acetoacetate Metabolism. Also An Inhibitor Of Polyamine Biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR000014
- InterPro:   IPR011785 [H]

Pfam domain/function: PF02954 HTH_8 [H]

EC number: NA

Molecular weight: Translated: 49483; Mature: 49352

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKPAQPDITLLLDMDGVIRDASLSPALAGESVQGWLGQAWTDVAGDDGGDKVRRMVED
CCCCCCCCCEEEEEECCCHHCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ARTSGISAFRQVNQRFPSGAELPIEFTTMLLGDRTGLLAVGKNLQAVTELHARLIAAQQT
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
IERDYWRLREMETRYRLVFDAATEAVMIVSAHDLRIVEANRAAVQALSGVDRDNEDVTGR
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECHHHHHHHHHCCCCCCCCCCHH
EILNEVAQLDRDAVREMLARVRDRGKALSILVHIGRDARPWMLRGSLVSSEQGQVFLLQF
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEE
SPVATTSRDDERAEPTVLKTLIDRVPDGFVALDAGGVIRHANQAFLDLVQIGSKGSAIGE
CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHH
SLGRWLNQPGADLAALMSHLQRYKTVRLFQTSIRGELGSETDVEISAVDGDDHNYLGVLI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHH
RNVSRRLGGGESDALRSALGPISKQLGRSSLRKLVKNTVGIVERHYVKEALELTKGNRTA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
TAELLGLSRQSLYAKLARYGLDDKGAVSQNAED
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAKPAQPDITLLLDMDGVIRDASLSPALAGESVQGWLGQAWTDVAGDDGGDKVRRMVED
CCCCCCCCEEEEEECCCHHCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ARTSGISAFRQVNQRFPSGAELPIEFTTMLLGDRTGLLAVGKNLQAVTELHARLIAAQQT
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
IERDYWRLREMETRYRLVFDAATEAVMIVSAHDLRIVEANRAAVQALSGVDRDNEDVTGR
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECHHHHHHHHHCCCCCCCCCCHH
EILNEVAQLDRDAVREMLARVRDRGKALSILVHIGRDARPWMLRGSLVSSEQGQVFLLQF
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEEE
SPVATTSRDDERAEPTVLKTLIDRVPDGFVALDAGGVIRHANQAFLDLVQIGSKGSAIGE
CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHH
SLGRWLNQPGADLAALMSHLQRYKTVRLFQTSIRGELGSETDVEISAVDGDDHNYLGVLI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHH
RNVSRRLGGGESDALRSALGPISKQLGRSSLRKLVKNTVGIVERHYVKEALELTKGNRTA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
TAELLGLSRQSLYAKLARYGLDDKGAVSQNAED
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA