| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is bchF [H]
Identifier: 86751090
GI number: 86751090
Start: 4548875
End: 4549420
Strand: Reverse
Name: bchF [H]
Synonym: RPB_3982
Alternate gene names: 86751090
Gene position: 4549420-4548875 (Counterclockwise)
Preceding gene: 86751093
Following gene: 86751089
Centisome position: 85.33
GC content: 62.09
Gene sequence:
>546_bases GTGCCGCATGGCGCGGCGGCTGAAGCCGCAAAGGTTCGGCAGCCAGTGCAGCAGCTTAAGACGCTTTACACCCCAGAAGA GCGGCTTCGCCGCGATGCAACAAAATGGACCCTGGTGCAGGGAATTCTCGCGCCGGTCCAATTTCTGGTCTTCCTGATCA GCCTCGGGCTGGTGCTCCGATATCTGGCGACGGGGGACGGTTACACCGCCGCAACCGTGTCGGTCGTGATCAAGACGCTG GTGCTCTACACCATCATGATCACAGGCGCGATCTGGGAGAAGGAAGTCTTCGGCTGCTATCTGTTCGCGCCGGCTTTCTT CTGGGAGGACGTCTTCAGTTTCCTCGTGCTGGCGCTGCACACCACCTATCTGGTGATGCTGTTCGCCGGCATTGGTGATC CGCGCCAGCAGATGCTGGCCGCGCTCGCCGCCTATGCGACCTACGTGGTCAACGCCGCGCAATTTCTGCTCAAGCTTCGC GCCGCGCGCCGCGACGAGCGGATTGCTGCGATGAATGCTCCCGGCATTTCGGGGAGCCGCGCATGA
Upstream 100 bases:
>100_bases GACGGTGTCTGCTTCCTCGCCACATTCGTCGGTATCGCATCACCGCGACCGCGATGTGTCAAATGTTCTTTACATCGACG CCGTCAAAACATCTTCCGCA
Downstream 100 bases:
>100_bases CCGTCCACGTGCAGCCCTGCGCCGCGCCAGCGGAAGATCCTGTCTCGCGTGCGGTTCGCACCGAGAGCGGCCAGCGCGAA GTCTTCTGCGGTCTCACCGG
Product: 2-vinyl bacteriochlorophyllide hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MPHGAAAEAAKVRQPVQQLKTLYTPEERLRRDATKWTLVQGILAPVQFLVFLISLGLVLRYLATGDGYTAATVSVVIKTL VLYTIMITGAIWEKEVFGCYLFAPAFFWEDVFSFLVLALHTTYLVMLFAGIGDPRQQMLAALAAYATYVVNAAQFLLKLR AARRDERIAAMNAPGISGSRA
Sequences:
>Translated_181_residues MPHGAAAEAAKVRQPVQQLKTLYTPEERLRRDATKWTLVQGILAPVQFLVFLISLGLVLRYLATGDGYTAATVSVVIKTL VLYTIMITGAIWEKEVFGCYLFAPAFFWEDVFSFLVLALHTTYLVMLFAGIGDPRQQMLAALAAYATYVVNAAQFLLKLR AARRDERIAAMNAPGISGSRA >Mature_180_residues PHGAAAEAAKVRQPVQQLKTLYTPEERLRRDATKWTLVQGILAPVQFLVFLISLGLVLRYLATGDGYTAATVSVVIKTLV LYTIMITGAIWEKEVFGCYLFAPAFFWEDVFSFLVLALHTTYLVMLFAGIGDPRQQMLAALAAYATYVVNAAQFLLKLRA ARRDERIAAMNAPGISGSRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009905 [H]
Pfam domain/function: PF07284 BCHF [H]
EC number: NA
Molecular weight: Translated: 19975; Mature: 19844
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHGAAAEAAKVRQPVQQLKTLYTPEERLRRDATKWTLVQGILAPVQFLVFLISLGLVLR CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLATGDGYTAATVSVVIKTLVLYTIMITGAIWEKEVFGCYLFAPAFFWEDVFSFLVLALH HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTYLVMLFAGIGDPRQQMLAALAAYATYVVNAAQFLLKLRAARRDERIAAMNAPGISGSR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC A C >Mature Secondary Structure PHGAAAEAAKVRQPVQQLKTLYTPEERLRRDATKWTLVQGILAPVQFLVFLISLGLVLR CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLATGDGYTAATVSVVIKTLVLYTIMITGAIWEKEVFGCYLFAPAFFWEDVFSFLVLALH HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTYLVMLFAGIGDPRQQMLAALAAYATYVVNAAQFLLKLRAARRDERIAAMNAPGISGSR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10648776 [H]