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The map label for this gene is 86751034

Identifier: 86751034

GI number: 86751034

Start: 4480334

End: 4480651

Strand: Direct

Name: 86751034

Synonym: RPB_3926

Alternate gene names: NA

Gene position: 4480334-4480651 (Clockwise)

Preceding gene: 86751033

Following gene: 86751035

Centisome position: 84.03

GC content: 64.47

Gene sequence:

>318_bases
ATGAAAGTCAGCAAACTGAAGAAATTCAACGCCGCCGAACACCTTCGCACGCCGGAAGCCCGAGCGGAGTATCTGAGCAT
CGTTCTCGCCGATGGCGATCCCACCGAAGTGCGTGACGCGCTCAATCTCGTCGCCCGCGCGCAGGGCATGAGCGCGGTCG
CCAAGGCCGCTGGCGTGACCAGAGAGGGGCTCTACAAGACGCTCGGCGAGAATGGTAACCCCGAATTCGCCACCGTCCTG
CGGGTGTTCGGCGCCATGGGAATCCGGCTGACGGCCGAACCGGCTGGAGCCAAGCCGCGGAAGAAGGCCGTGGCGTGA

Upstream 100 bases:

>100_bases
ACATCGCGGTCGCGGGTTGTAATCTGTAGATTACAATTGCCGCATGATCGCCGATCGCGAAACAGGCCAAGGACATCGCA
GAGGCATTGGAGGACTGAGG

Downstream 100 bases:

>100_bases
CGTAACCGCCCGCCAGCATGGTCGATCTCGCGAGCCTTCGGACCGACCGATCTGCTTACTGCCCGCTGGGCCGCCACGAC
AGGTCGTCGGACCAGAGATA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKVSKLKKFNAAEHLRTPEARAEYLSIVLADGDPTEVRDALNLVARAQGMSAVAKAAGVTREGLYKTLGENGNPEFATVL
RVFGAMGIRLTAEPAGAKPRKKAVA

Sequences:

>Translated_105_residues
MKVSKLKKFNAAEHLRTPEARAEYLSIVLADGDPTEVRDALNLVARAQGMSAVAKAAGVTREGLYKTLGENGNPEFATVL
RVFGAMGIRLTAEPAGAKPRKKAVA
>Mature_105_residues
MKVSKLKKFNAAEHLRTPEARAEYLSIVLADGDPTEVRDALNLVARAQGMSAVAKAAGVTREGLYKTLGENGNPEFATVL
RVFGAMGIRLTAEPAGAKPRKKAVA

Specific function: Unknown

COG id: COG3636

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014057
- InterPro:   IPR001387 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 11150; Mature: 11150

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSKLKKFNAAEHLRTPEARAEYLSIVLADGDPTEVRDALNLVARAQGMSAVAKAAGVT
CCCCHHHHHCCHHHHCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
REGLYKTLGENGNPEFATVLRVFGAMGIRLTAEPAGAKPRKKAVA
HHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKVSKLKKFNAAEHLRTPEARAEYLSIVLADGDPTEVRDALNLVARAQGMSAVAKAAGVT
CCCCHHHHHCCHHHHCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
REGLYKTLGENGNPEFATVLRVFGAMGIRLTAEPAGAKPRKKAVA
HHHHHHHHCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]