Click here to switch to the map view.

The map label for this gene is 86750835

Identifier: 86750835

GI number: 86750835

Start: 4262250

End: 4262678

Strand: Direct

Name: 86750835

Synonym: RPB_3725

Alternate gene names: NA

Gene position: 4262250-4262678 (Clockwise)

Preceding gene: 86750834

Following gene: 86750841

Centisome position: 79.94

GC content: 52.21

Gene sequence:

>429_bases
ATGACGTCTTTTTCCAATCGAGAGGTCGGGAATGCTTGGACCTCGTTTATTCTGGGCGAGCTATACGAAAGCTGGCCCAT
GAAGATCAATCTCAATCATCTCGACATCGGTTCAAGAACAAAGGTTGCTCCGGTACGCGATGAAGAGATTCTCTTTGATG
ACCTCATCTCTTGGCTGGAGGCGGAAGGCTATATTCGGACCAGCCCCCAAGACGCACCAGAAGGCAATGTCTTTGGCGTA
GCCCTCACTTCGAAGGGATACGAGATCCTCGGCAACATTCCAGACAGTCTCAGTAAGCCACTCGGGGTCCGTCTGAAAGA
GGCGGCTCTCGAAGCCGGAAAAGACGGGGCCATGAAGGCTGGGAAGGAATCTATTGCCGCACTAATCGGGATGACATTTG
GCGCGGCAATCAAGACTTTGACGGTTTGA

Upstream 100 bases:

>100_bases
CGAAGCGACATGCAGGAAGACCCCGGGTGTCGCTGCGCTCACCCGGGTTACGCTGCTGCGCTTACTACAATCGCTTGAGT
ACCGACTGGGAGGATTTTCT

Downstream 100 bases:

>100_bases
CTGAGATACTGCGGATTTAATGGGCACCGCGAGTGTTTGATGAAGCCGGAGGTGGCCCATGCAGCAATGTAAGTTCAGTC
GAGAGTTCAGGTCGAAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTSFSNREVGNAWTSFILGELYESWPMKINLNHLDIGSRTKVAPVRDEEILFDDLISWLEAEGYIRTSPQDAPEGNVFGV
ALTSKGYEILGNIPDSLSKPLGVRLKEAALEAGKDGAMKAGKESIAALIGMTFGAAIKTLTV

Sequences:

>Translated_142_residues
MTSFSNREVGNAWTSFILGELYESWPMKINLNHLDIGSRTKVAPVRDEEILFDDLISWLEAEGYIRTSPQDAPEGNVFGV
ALTSKGYEILGNIPDSLSKPLGVRLKEAALEAGKDGAMKAGKESIAALIGMTFGAAIKTLTV
>Mature_141_residues
TSFSNREVGNAWTSFILGELYESWPMKINLNHLDIGSRTKVAPVRDEEILFDDLISWLEAEGYIRTSPQDAPEGNVFGVA
LTSKGYEILGNIPDSLSKPLGVRLKEAALEAGKDGAMKAGKESIAALIGMTFGAAIKTLTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15346; Mature: 15214

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFSNREVGNAWTSFILGELYESWPMKINLNHLDIGSRTKVAPVRDEEILFDDLISWLE
CCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCEECCCCCCCCCCCCCHHHHHHHHHHHHH
AEGYIRTSPQDAPEGNVFGVALTSKGYEILGNIPDSLSKPLGVRLKEAALEAGKDGAMKA
CCCEEECCCCCCCCCCEEEEEECCCCCEEECCCCHHHCCCCCCHHHHHHHHCCCCCCHHC
GKESIAALIGMTFGAAIKTLTV
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSFSNREVGNAWTSFILGELYESWPMKINLNHLDIGSRTKVAPVRDEEILFDDLISWLE
CCCCCCCCHHHHHHHHHHHHHHCCCCEEECCEECCCCCCCCCCCCCHHHHHHHHHHHHH
AEGYIRTSPQDAPEGNVFGVALTSKGYEILGNIPDSLSKPLGVRLKEAALEAGKDGAMKA
CCCEEECCCCCCCCCCEEEEEECCCCCEEECCCCHHHCCCCCCHHHHHHHHCCCCCCHHC
GKESIAALIGMTFGAAIKTLTV
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA