| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is livG [H]
Identifier: 86750793
GI number: 86750793
Start: 4222873
End: 4223712
Strand: Direct
Name: livG [H]
Synonym: RPB_3683
Alternate gene names: 86750793
Gene position: 4222873-4223712 (Clockwise)
Preceding gene: 86750792
Following gene: 86750794
Centisome position: 79.2
GC content: 66.31
Gene sequence:
>840_bases ATGAGCAACGCCCCCCCCATTCTCCGCGTCGAGGGACTGACAATGCGGTTCGGCGGCATCGTCGCCGTCAACGAATTGTC GTTCGAGGCGCAGCGCGGCAAGATCACCGCCCTGATCGGCCCGAACGGCGCCGGCAAGACCACGGTGTTCAATTGCATCA CCGGTTTCTACAAGCCGAGCGCCGGCGCGATCGGCCTGCAGCATCCCGGCGGCGACAGCTACCGGCTCGACAAGCTCAAC GACTTCCGCATCACCAAGATCGCCAAGGTCGCACGCACCTTCCAGAACATCCGGCTGTTCGCCGGCATGACCGCGCTGGA AAACCTGATGGTGGCGCAGCACAACAAGCTGATGCTCGCATCCGGTCTGACCTTTCTCGGCCTGTTCGGCGCGCCGTCCT GGCGCGCGGCGGAAAAGCAGGCGATCGAGCGCGCCACCTTCTGGCTGAAGCAGATCGGCCTCTTGGAGCGCGCCGACGAG GCCGCCGGCAATCTGCCTTACGGCGATCAACGGCGGCTGGAGATCGCGCGGGCGATGTGCACCGAGCCGGTGCTGCTGTG CCTCGACGAGCCGGCCGCCGGCCTCAATGCGCGCGAGAGCGCGGCGCTCAGCGAGTTGCTGCTCTCGATCCGCGACGACC ACGGGACCTCGATCCTCCTGATCGAGCACGACATGAGCGTGGTGATGGAAATCTCCGACGCCGTCGTCGTGCTCGACTAC GGCGTCAAGATCGCCGAGGGCACGCCGCAGCAGATCCGCGACGACCAGCGCGTCATCGCCGCCTATCTCGGCGTCGAGGA CGAAGAGGTCGAAGCCGTCGAGCAGGAGCTCGGGCTGTGA
Upstream 100 bases:
>100_bases TGGTATGGCGACCGCGCGGCCTGATCGGCCACCGCGCGCCGACCGTGTATCTGCAGCACAATCAGGCGATCTCGTCCGAC CTCGTCAAGGAGGGCCATGG
Downstream 100 bases:
>100_bases CCTGGCTCTCCCCATTTGCGGCGTCATGGCCGGGCTTGACCCGGCCATCCCCCGCTTCGTCATTGCGAGGAGCGAAGCGA CGAAGCAATCCAGCGCAGTG
Product: ABC transporter related
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSNAPPILRVEGLTMRFGGIVAVNELSFEAQRGKITALIGPNGAGKTTVFNCITGFYKPSAGAIGLQHPGGDSYRLDKLN DFRITKIAKVARTFQNIRLFAGMTALENLMVAQHNKLMLASGLTFLGLFGAPSWRAAEKQAIERATFWLKQIGLLERADE AAGNLPYGDQRRLEIARAMCTEPVLLCLDEPAAGLNARESAALSELLLSIRDDHGTSILLIEHDMSVVMEISDAVVVLDY GVKIAEGTPQQIRDDQRVIAAYLGVEDEEVEAVEQELGL
Sequences:
>Translated_279_residues MSNAPPILRVEGLTMRFGGIVAVNELSFEAQRGKITALIGPNGAGKTTVFNCITGFYKPSAGAIGLQHPGGDSYRLDKLN DFRITKIAKVARTFQNIRLFAGMTALENLMVAQHNKLMLASGLTFLGLFGAPSWRAAEKQAIERATFWLKQIGLLERADE AAGNLPYGDQRRLEIARAMCTEPVLLCLDEPAAGLNARESAALSELLLSIRDDHGTSILLIEHDMSVVMEISDAVVVLDY GVKIAEGTPQQIRDDQRVIAAYLGVEDEEVEAVEQELGL >Mature_278_residues SNAPPILRVEGLTMRFGGIVAVNELSFEAQRGKITALIGPNGAGKTTVFNCITGFYKPSAGAIGLQHPGGDSYRLDKLND FRITKIAKVARTFQNIRLFAGMTALENLMVAQHNKLMLASGLTFLGLFGAPSWRAAEKQAIERATFWLKQIGLLERADEA AGNLPYGDQRRLEIARAMCTEPVLLCLDEPAAGLNARESAALSELLLSIRDDHGTSILLIEHDMSVVMEISDAVVVLDYG VKIAEGTPQQIRDDQRVIAAYLGVEDEEVEAVEQELGL
Specific function: Component of the leucine-specific transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=245, Percent_Identity=26.9387755102041, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI30795238, Length=245, Percent_Identity=26.9387755102041, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI31657092, Length=244, Percent_Identity=27.0491803278689, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI105990541, Length=236, Percent_Identity=25.4237288135593, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI9665248, Length=254, Percent_Identity=26.3779527559055, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI21536376, Length=256, Percent_Identity=26.171875, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI11967969, Length=237, Percent_Identity=22.7848101265823, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1789864, Length=259, Percent_Identity=54.8262548262548, Blast_Score=278, Evalue=2e-76, Organism=Escherichia coli, GI1790525, Length=255, Percent_Identity=26.6666666666667, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788761, Length=245, Percent_Identity=29.3877551020408, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1788210, Length=264, Percent_Identity=27.6515151515151, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786398, Length=234, Percent_Identity=29.0598290598291, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI48995001, Length=235, Percent_Identity=29.3617021276596, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1790190, Length=243, Percent_Identity=27.5720164609054, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI87081709, Length=261, Percent_Identity=26.4367816091954, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787029, Length=248, Percent_Identity=25.4032258064516, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788225, Length=259, Percent_Identity=27.027027027027, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1789672, Length=247, Percent_Identity=23.4817813765182, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI87082268, Length=262, Percent_Identity=27.8625954198473, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1789991, Length=245, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI87081791, Length=261, Percent_Identity=24.904214559387, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1788644, Length=253, Percent_Identity=28.4584980237154, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787370, Length=265, Percent_Identity=25.6603773584906, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1789593, Length=257, Percent_Identity=26.0700389105058, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1790544, Length=269, Percent_Identity=26.0223048327138, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI87081782, Length=254, Percent_Identity=26.7716535433071, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1789032, Length=247, Percent_Identity=25.9109311740891, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786872, Length=244, Percent_Identity=24.5901639344262, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790739, Length=245, Percent_Identity=27.3469387755102, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789962, Length=240, Percent_Identity=27.0833333333333, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786563, Length=240, Percent_Identity=27.9166666666667, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI48994943, Length=250, Percent_Identity=27.2, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1786703, Length=199, Percent_Identity=27.6381909547739, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1787164, Length=241, Percent_Identity=26.1410788381743, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787758, Length=237, Percent_Identity=25.7383966244726, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787089, Length=242, Percent_Identity=24.3801652892562, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786319, Length=206, Percent_Identity=30.0970873786408, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787712, Length=254, Percent_Identity=25.5905511811024, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788897, Length=246, Percent_Identity=26.8292682926829, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1786345, Length=243, Percent_Identity=27.1604938271605, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI48994997, Length=253, Percent_Identity=24.901185770751, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87081834, Length=219, Percent_Identity=25.5707762557078, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789873, Length=239, Percent_Identity=27.6150627615063, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788450, Length=235, Percent_Identity=25.9574468085106, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI87082267, Length=267, Percent_Identity=24.7191011235955, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788472, Length=247, Percent_Identity=25.5060728744939, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787759, Length=261, Percent_Identity=29.1187739463602, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI145693107, Length=261, Percent_Identity=26.8199233716475, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790467, Length=261, Percent_Identity=23.3716475095785, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790162, Length=244, Percent_Identity=25, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787792, Length=278, Percent_Identity=23.021582733813, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787548, Length=257, Percent_Identity=24.5136186770428, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786253, Length=256, Percent_Identity=25.78125, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787105, Length=218, Percent_Identity=25.2293577981651, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787500, Length=262, Percent_Identity=24.0458015267176, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789586, Length=250, Percent_Identity=26.8, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1790534, Length=219, Percent_Identity=28.7671232876712, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI48994883, Length=263, Percent_Identity=24.7148288973384, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787143, Length=247, Percent_Identity=25.5060728744939, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71983510, Length=247, Percent_Identity=26.7206477732794, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71983516, Length=247, Percent_Identity=26.7206477732794, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71983523, Length=247, Percent_Identity=26.7206477732794, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI115533608, Length=221, Percent_Identity=28.9592760180996, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71992290, Length=219, Percent_Identity=27.8538812785388, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI221512771, Length=263, Percent_Identity=28.1368821292776, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24648314, Length=251, Percent_Identity=25.8964143426295, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24666092, Length=248, Percent_Identity=27.0161290322581, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24643674, Length=241, Percent_Identity=24.0663900414938, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI161076682, Length=234, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI161076684, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24581617, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24581615, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24582014, Length=266, Percent_Identity=24.812030075188, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24582012, Length=266, Percent_Identity=24.812030075188, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI19920532, Length=250, Percent_Identity=23.2, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24580930, Length=250, Percent_Identity=23.2, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI116007184, Length=232, Percent_Identity=25, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI221500365, Length=232, Percent_Identity=25, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI85725262, Length=235, Percent_Identity=25.9574468085106, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI28574744, Length=226, Percent_Identity=25.6637168141593, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 30310; Mature: 30179
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAPPILRVEGLTMRFGGIVAVNELSFEAQRGKITALIGPNGAGKTTVFNCITGFYKPS CCCCCCEEEEECEEEEECCEEEEEECCEEECCCEEEEEECCCCCCCHHHHHHHHHCCCCC AGAIGLQHPGGDSYRLDKLNDFRITKIAKVARTFQNIRLFAGMTALENLMVAQHNKLMLA CCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE SGLTFLGLFGAPSWRAAEKQAIERATFWLKQIGLLERADEAAGNLPYGDQRRLEIARAMC CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC TEPVLLCLDEPAAGLNARESAALSELLLSIRDDHGTSILLIEHDMSVVMEISDAVVVLDY CCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCEEEEEEC GVKIAEGTPQQIRDDQRVIAAYLGVEDEEVEAVEQELGL CEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure SNAPPILRVEGLTMRFGGIVAVNELSFEAQRGKITALIGPNGAGKTTVFNCITGFYKPS CCCCCEEEEECEEEEECCEEEEEECCEEECCCEEEEEECCCCCCCHHHHHHHHHCCCCC AGAIGLQHPGGDSYRLDKLNDFRITKIAKVARTFQNIRLFAGMTALENLMVAQHNKLMLA CCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE SGLTFLGLFGAPSWRAAEKQAIERATFWLKQIGLLERADEAAGNLPYGDQRRLEIARAMC CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC TEPVLLCLDEPAAGLNARESAALSELLLSIRDDHGTSILLIEHDMSVVMEISDAVVVLDY CCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCEEEEEEC GVKIAEGTPQQIRDDQRVIAAYLGVEDEEVEAVEQELGL CEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]