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The map label for this gene is 86750752

Identifier: 86750752

GI number: 86750752

Start: 4178799

End: 4179482

Strand: Direct

Name: 86750752

Synonym: RPB_3642

Alternate gene names: NA

Gene position: 4178799-4179482 (Clockwise)

Preceding gene: 86750746

Following gene: 86750762

Centisome position: 78.38

GC content: 64.47

Gene sequence:

>684_bases
ATGGCTCGCACGCGAGCGAACGACTACGACCAGAAACGCCGCGGCATCCTCAGCCGTTCCGCGAAGCTGTTCGCGGAGCA
CGGCTATACCGGAACCTCGATCACCATGATCGCGGAGGCCTGCGGCGTCTCAAAGGCGCTGATGTATCACTACTACCGCT
CCAAGGACGCGGTGCTGTTCGATCTGCTCGCCGACCATTTGCAGCATCTCGTCGGCGTGGTCGAATCTGCTGCGCGGTCC
GAGGGCGACGCTGGCGAGCGGCTGTTCGCCATCGCGGCGGCACTGCTGGAAGCCTATCGCGGCGCCGACGCCGAACATCA
GGTGCAGATCTCGAGCCTCAAGTTGTTACCAGGCGAGCAGCAGGAGGAACTGAAGGCGCTGGAGCGCAGTCTCGTCAGCC
TGATGTCGGATGCAATCAGCGCTGCGATCCCGGCGACCGCCGCCAAGCCGCATCTCCTGAAGCCGCTGACGATGTCGCTG
TTCGGCATGTTGAACTGGCACTATTTGTGGTTCCGCGAAGGCAAGGGGCTGAACCGCCAGACCTATGCGAAAATGGTGAC
GACGCTGATGGTCGCCGGCGCAGAACAGGCGATGGACGCGGTCGAAGACGACGACGCCGAGCCCGGGCGCACAACGTCGC
GCAGGAAGAACGAGCGGCCGGCAGTGGCGCGGCGCGCAGGGTAG

Upstream 100 bases:

>100_bases
TGGAAATATAATTGACCAATTGGACGGTCAATGCAAGTGTCGGAACCAGTCATCCGCGGTTCGTGTCGGGCGTGCCGCAC
CAAGCAGGATGTTGCATCGC

Downstream 100 bases:

>100_bases
CGACTTCTGCACATCCTCTCCACGTCATTCCGGGGCGCTCGCCGAAGCGAGCGAACCCGGAATACCGAGGTTGTTGCGAC
TACCGGATGAACACCTCGCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcription Regulator Protein; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Of Paa Operon; Paa Operon Transcriptional Regulator; TetR-Family Transcriptional Regulator; TetR Family Regulatory Protein

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MARTRANDYDQKRRGILSRSAKLFAEHGYTGTSITMIAEACGVSKALMYHYYRSKDAVLFDLLADHLQHLVGVVESAARS
EGDAGERLFAIAAALLEAYRGADAEHQVQISSLKLLPGEQQEELKALERSLVSLMSDAISAAIPATAAKPHLLKPLTMSL
FGMLNWHYLWFREGKGLNRQTYAKMVTTLMVAGAEQAMDAVEDDDAEPGRTTSRRKNERPAVARRAG

Sequences:

>Translated_227_residues
MARTRANDYDQKRRGILSRSAKLFAEHGYTGTSITMIAEACGVSKALMYHYYRSKDAVLFDLLADHLQHLVGVVESAARS
EGDAGERLFAIAAALLEAYRGADAEHQVQISSLKLLPGEQQEELKALERSLVSLMSDAISAAIPATAAKPHLLKPLTMSL
FGMLNWHYLWFREGKGLNRQTYAKMVTTLMVAGAEQAMDAVEDDDAEPGRTTSRRKNERPAVARRAG
>Mature_226_residues
ARTRANDYDQKRRGILSRSAKLFAEHGYTGTSITMIAEACGVSKALMYHYYRSKDAVLFDLLADHLQHLVGVVESAARSE
GDAGERLFAIAAALLEAYRGADAEHQVQISSLKLLPGEQQEELKALERSLVSLMSDAISAAIPATAAKPHLLKPLTMSLF
GMLNWHYLWFREGKGLNRQTYAKMVTTLMVAGAEQAMDAVEDDDAEPGRTTSRRKNERPAVARRAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24995; Mature: 24864

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTRANDYDQKRRGILSRSAKLFAEHGYTGTSITMIAEACGVSKALMYHYYRSKDAVLF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHH
DLLADHLQHLVGVVESAARSEGDAGERLFAIAAALLEAYRGADAEHQVQISSLKLLPGEQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEHHHEECCCCCC
QEELKALERSLVSLMSDAISAAIPATAAKPHLLKPLTMSLFGMLNWHYLWFREGKGLNRQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHH
TYAKMVTTLMVAGAEQAMDAVEDDDAEPGRTTSRRKNERPAVARRAG
HHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHCCCC
>Mature Secondary Structure 
ARTRANDYDQKRRGILSRSAKLFAEHGYTGTSITMIAEACGVSKALMYHYYRSKDAVLF
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHH
DLLADHLQHLVGVVESAARSEGDAGERLFAIAAALLEAYRGADAEHQVQISSLKLLPGEQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEHHHEECCCCCC
QEELKALERSLVSLMSDAISAAIPATAAKPHLLKPLTMSLFGMLNWHYLWFREGKGLNRQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHH
TYAKMVTTLMVAGAEQAMDAVEDDDAEPGRTTSRRKNERPAVARRAG
HHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA