| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750713
Identifier: 86750713
GI number: 86750713
Start: 4135738
End: 4136145
Strand: Reverse
Name: 86750713
Synonym: RPB_3603
Alternate gene names: NA
Gene position: 4136145-4135738 (Counterclockwise)
Preceding gene: 86750714
Following gene: 86750711
Centisome position: 77.58
GC content: 65.69
Gene sequence:
>408_bases ATGCAGGACGAACCGAGGCCCGACGAACTGATCAAGGCGGTGGCCGATTTCCTGCGCGAGCAGGTCGCGCCGCAGCTCAC CGGCCACGCCGCGTTCAAACTGCGCGTCGGCATCAACGCGCTGGATCTGGTGACGCGGCAGCTCACGCTGACGCAGGCGA GCGACACCGACGAGCTCGCGCGTCTGAAGGAACTGCTCGGCCATGACGGCGCGCTGCACGACCTCAACCGCGAATTGTCA GAACGCATCGCGTCGGGCGCGATGGATCTGTCGACGCCGGGTTTGCAGGATCATCTGTGGCGCACCACGCTCGCCAAGCT CGCCGTCGACCAGCCGAACTACGCGAGCTATCGGCGCGAGCTGGAAGGCGCGGGACAACACCTTTCAGCAAACGCTCCGT CATCCTGA
Upstream 100 bases:
>100_bases ATGGAACGCGCGATGATCGGGCGCCGCTCGTCGGAAACCGAGATCGATCTGCTGCGGTTATTGGCGCCGCGCGCCTAGAT AACGAAGGGGCGAAGCCGAG
Downstream 100 bases:
>100_bases GGTGCGCGCCCTTGCGCGCCTCGAAAGATGAGCCGCAGGCCATCGACGTCAGCGGCTCGTCGCCGCATCCTTCGAGGCTC GCCCGAAGAGGGCGAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MQDEPRPDELIKAVADFLREQVAPQLTGHAAFKLRVGINALDLVTRQLTLTQASDTDELARLKELLGHDGALHDLNRELS ERIASGAMDLSTPGLQDHLWRTTLAKLAVDQPNYASYRRELEGAGQHLSANAPSS
Sequences:
>Translated_135_residues MQDEPRPDELIKAVADFLREQVAPQLTGHAAFKLRVGINALDLVTRQLTLTQASDTDELARLKELLGHDGALHDLNRELS ERIASGAMDLSTPGLQDHLWRTTLAKLAVDQPNYASYRRELEGAGQHLSANAPSS >Mature_135_residues MQDEPRPDELIKAVADFLREQVAPQLTGHAAFKLRVGINALDLVTRQLTLTQASDTDELARLKELLGHDGALHDLNRELS ERIASGAMDLSTPGLQDHLWRTTLAKLAVDQPNYASYRRELEGAGQHLSANAPSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14835; Mature: 14835
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDEPRPDELIKAVADFLREQVAPQLTGHAAFKLRVGINALDLVTRQLTLTQASDTDELA CCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHEEEEECCHHHHHHHHHHHHHCCCCHHHHH RLKELLGHDGALHDLNRELSERIASGAMDLSTPGLQDHLWRTTLAKLAVDQPNYASYRRE HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH LEGAGQHLSANAPSS HHHCCCCCCCCCCCC >Mature Secondary Structure MQDEPRPDELIKAVADFLREQVAPQLTGHAAFKLRVGINALDLVTRQLTLTQASDTDELA CCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHEEEEECCHHHHHHHHHHHHHCCCCHHHHH RLKELLGHDGALHDLNRELSERIASGAMDLSTPGLQDHLWRTTLAKLAVDQPNYASYRRE HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH LEGAGQHLSANAPSS HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA