Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750713

Identifier: 86750713

GI number: 86750713

Start: 4135738

End: 4136145

Strand: Reverse

Name: 86750713

Synonym: RPB_3603

Alternate gene names: NA

Gene position: 4136145-4135738 (Counterclockwise)

Preceding gene: 86750714

Following gene: 86750711

Centisome position: 77.58

GC content: 65.69

Gene sequence:

>408_bases
ATGCAGGACGAACCGAGGCCCGACGAACTGATCAAGGCGGTGGCCGATTTCCTGCGCGAGCAGGTCGCGCCGCAGCTCAC
CGGCCACGCCGCGTTCAAACTGCGCGTCGGCATCAACGCGCTGGATCTGGTGACGCGGCAGCTCACGCTGACGCAGGCGA
GCGACACCGACGAGCTCGCGCGTCTGAAGGAACTGCTCGGCCATGACGGCGCGCTGCACGACCTCAACCGCGAATTGTCA
GAACGCATCGCGTCGGGCGCGATGGATCTGTCGACGCCGGGTTTGCAGGATCATCTGTGGCGCACCACGCTCGCCAAGCT
CGCCGTCGACCAGCCGAACTACGCGAGCTATCGGCGCGAGCTGGAAGGCGCGGGACAACACCTTTCAGCAAACGCTCCGT
CATCCTGA

Upstream 100 bases:

>100_bases
ATGGAACGCGCGATGATCGGGCGCCGCTCGTCGGAAACCGAGATCGATCTGCTGCGGTTATTGGCGCCGCGCGCCTAGAT
AACGAAGGGGCGAAGCCGAG

Downstream 100 bases:

>100_bases
GGTGCGCGCCCTTGCGCGCCTCGAAAGATGAGCCGCAGGCCATCGACGTCAGCGGCTCGTCGCCGCATCCTTCGAGGCTC
GCCCGAAGAGGGCGAGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MQDEPRPDELIKAVADFLREQVAPQLTGHAAFKLRVGINALDLVTRQLTLTQASDTDELARLKELLGHDGALHDLNRELS
ERIASGAMDLSTPGLQDHLWRTTLAKLAVDQPNYASYRRELEGAGQHLSANAPSS

Sequences:

>Translated_135_residues
MQDEPRPDELIKAVADFLREQVAPQLTGHAAFKLRVGINALDLVTRQLTLTQASDTDELARLKELLGHDGALHDLNRELS
ERIASGAMDLSTPGLQDHLWRTTLAKLAVDQPNYASYRRELEGAGQHLSANAPSS
>Mature_135_residues
MQDEPRPDELIKAVADFLREQVAPQLTGHAAFKLRVGINALDLVTRQLTLTQASDTDELARLKELLGHDGALHDLNRELS
ERIASGAMDLSTPGLQDHLWRTTLAKLAVDQPNYASYRRELEGAGQHLSANAPSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14835; Mature: 14835

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDEPRPDELIKAVADFLREQVAPQLTGHAAFKLRVGINALDLVTRQLTLTQASDTDELA
CCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHEEEEECCHHHHHHHHHHHHHCCCCHHHHH
RLKELLGHDGALHDLNRELSERIASGAMDLSTPGLQDHLWRTTLAKLAVDQPNYASYRRE
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
LEGAGQHLSANAPSS
HHHCCCCCCCCCCCC
>Mature Secondary Structure
MQDEPRPDELIKAVADFLREQVAPQLTGHAAFKLRVGINALDLVTRQLTLTQASDTDELA
CCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHEEEEECCHHHHHHHHHHHHHCCCCHHHHH
RLKELLGHDGALHDLNRELSERIASGAMDLSTPGLQDHLWRTTLAKLAVDQPNYASYRRE
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
LEGAGQHLSANAPSS
HHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA