Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750691

Identifier: 86750691

GI number: 86750691

Start: 4105610

End: 4106179

Strand: Reverse

Name: 86750691

Synonym: RPB_3581

Alternate gene names: NA

Gene position: 4106179-4105610 (Counterclockwise)

Preceding gene: 86750692

Following gene: 86750690

Centisome position: 77.02

GC content: 61.58

Gene sequence:

>570_bases
ATGACCTCCGATTTCGACAGACTGACCAATCGTCTGCCCGGCGCGCTGCCGACGCGGCGGTTTCCGAAGAACGGCATGGA
TCGCTTCATCGACGTGATCGAATGGATCGCGGCGTTCTTCGTCGGCGTCGTCGCCCTGAACACCTTCCTCGCGGTGTTCA
TGCGCAAATTCTTCTCGGTGACGATCCCCGATTACTACAATGTCGGCCAGTTCCTGCTCGGCATCCTGATCTTCTGGGGG
ATCGCGGCGACGTCCTATCGCGGCACCCACATCACCGTCGATCTGCTGTGGGGCAATGTCGGCCCCCGGGCGCAGCGCTG
GATCGACGTGTTCGCGACGCTGGTGCTGCTGTTCGTCGTCACGGTGCAGACCTACACGCTGTTCGACAAGGTGGTGACGA
CCAGGGCCGACCACATCGTCACCATGGACCTGCAAATGCCGATCTGGCCGTTCTTTCTCGTCGCCTGGCTCGGCGACGTC
GCGGCCGTCGTGCTGATCGCGATTCGAACCTGGCGGCTGATCTTCCATCCGGACGAACTGCACGACCCCAAATTCAAGCC
GGTGGAATGA

Upstream 100 bases:

>100_bases
GCCGTCGCCCTTCGAGGCCGTCGCTGCGCGCCGGCGCCTCAGGGTGACGGCTCCTTTCCCGTTCCGATGATGACAACGTT
CGCCCCATGACCTTCGCCCC

Downstream 100 bases:

>100_bases
CCATGGACAACGACGTGGTGGCGCTGATCGGTTTCGTCAGCCTGTTCGCGCTGATGCTGCTGCGCGTGCCGATCGGCATG
GCGATGGGGCTCGTCGGCAT

Product: TRAP dicarboxylate family transporter DctQ subunit

Products: NA

Alternate protein names: TrapT Family DctQ Subunit C4-Dicarboxylate Transport

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTSDFDRLTNRLPGALPTRRFPKNGMDRFIDVIEWIAAFFVGVVALNTFLAVFMRKFFSVTIPDYYNVGQFLLGILIFWG
IAATSYRGTHITVDLLWGNVGPRAQRWIDVFATLVLLFVVTVQTYTLFDKVVTTRADHIVTMDLQMPIWPFFLVAWLGDV
AAVVLIAIRTWRLIFHPDELHDPKFKPVE

Sequences:

>Translated_189_residues
MTSDFDRLTNRLPGALPTRRFPKNGMDRFIDVIEWIAAFFVGVVALNTFLAVFMRKFFSVTIPDYYNVGQFLLGILIFWG
IAATSYRGTHITVDLLWGNVGPRAQRWIDVFATLVLLFVVTVQTYTLFDKVVTTRADHIVTMDLQMPIWPFFLVAWLGDV
AAVVLIAIRTWRLIFHPDELHDPKFKPVE
>Mature_188_residues
TSDFDRLTNRLPGALPTRRFPKNGMDRFIDVIEWIAAFFVGVVALNTFLAVFMRKFFSVTIPDYYNVGQFLLGILIFWGI
AATSYRGTHITVDLLWGNVGPRAQRWIDVFATLVLLFVVTVQTYTLFDKVVTTRADHIVTMDLQMPIWPFFLVAWLGDVA
AVVLIAIRTWRLIFHPDELHDPKFKPVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21754; Mature: 21623

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSDFDRLTNRLPGALPTRRFPKNGMDRFIDVIEWIAAFFVGVVALNTFLAVFMRKFFSV
CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TIPDYYNVGQFLLGILIFWGIAATSYRGTHITVDLLWGNVGPRAQRWIDVFATLVLLFVV
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
TVQTYTLFDKVVTTRADHIVTMDLQMPIWPFFLVAWLGDVAAVVLIAIRTWRLIFHPDEL
HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
HDPKFKPVE
CCCCCCCCC
>Mature Secondary Structure 
TSDFDRLTNRLPGALPTRRFPKNGMDRFIDVIEWIAAFFVGVVALNTFLAVFMRKFFSV
CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TIPDYYNVGQFLLGILIFWGIAATSYRGTHITVDLLWGNVGPRAQRWIDVFATLVLLFVV
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
TVQTYTLFDKVVTTRADHIVTMDLQMPIWPFFLVAWLGDVAAVVLIAIRTWRLIFHPDEL
HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
HDPKFKPVE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA