| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750691
Identifier: 86750691
GI number: 86750691
Start: 4105610
End: 4106179
Strand: Reverse
Name: 86750691
Synonym: RPB_3581
Alternate gene names: NA
Gene position: 4106179-4105610 (Counterclockwise)
Preceding gene: 86750692
Following gene: 86750690
Centisome position: 77.02
GC content: 61.58
Gene sequence:
>570_bases ATGACCTCCGATTTCGACAGACTGACCAATCGTCTGCCCGGCGCGCTGCCGACGCGGCGGTTTCCGAAGAACGGCATGGA TCGCTTCATCGACGTGATCGAATGGATCGCGGCGTTCTTCGTCGGCGTCGTCGCCCTGAACACCTTCCTCGCGGTGTTCA TGCGCAAATTCTTCTCGGTGACGATCCCCGATTACTACAATGTCGGCCAGTTCCTGCTCGGCATCCTGATCTTCTGGGGG ATCGCGGCGACGTCCTATCGCGGCACCCACATCACCGTCGATCTGCTGTGGGGCAATGTCGGCCCCCGGGCGCAGCGCTG GATCGACGTGTTCGCGACGCTGGTGCTGCTGTTCGTCGTCACGGTGCAGACCTACACGCTGTTCGACAAGGTGGTGACGA CCAGGGCCGACCACATCGTCACCATGGACCTGCAAATGCCGATCTGGCCGTTCTTTCTCGTCGCCTGGCTCGGCGACGTC GCGGCCGTCGTGCTGATCGCGATTCGAACCTGGCGGCTGATCTTCCATCCGGACGAACTGCACGACCCCAAATTCAAGCC GGTGGAATGA
Upstream 100 bases:
>100_bases GCCGTCGCCCTTCGAGGCCGTCGCTGCGCGCCGGCGCCTCAGGGTGACGGCTCCTTTCCCGTTCCGATGATGACAACGTT CGCCCCATGACCTTCGCCCC
Downstream 100 bases:
>100_bases CCATGGACAACGACGTGGTGGCGCTGATCGGTTTCGTCAGCCTGTTCGCGCTGATGCTGCTGCGCGTGCCGATCGGCATG GCGATGGGGCTCGTCGGCAT
Product: TRAP dicarboxylate family transporter DctQ subunit
Products: NA
Alternate protein names: TrapT Family DctQ Subunit C4-Dicarboxylate Transport
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTSDFDRLTNRLPGALPTRRFPKNGMDRFIDVIEWIAAFFVGVVALNTFLAVFMRKFFSVTIPDYYNVGQFLLGILIFWG IAATSYRGTHITVDLLWGNVGPRAQRWIDVFATLVLLFVVTVQTYTLFDKVVTTRADHIVTMDLQMPIWPFFLVAWLGDV AAVVLIAIRTWRLIFHPDELHDPKFKPVE
Sequences:
>Translated_189_residues MTSDFDRLTNRLPGALPTRRFPKNGMDRFIDVIEWIAAFFVGVVALNTFLAVFMRKFFSVTIPDYYNVGQFLLGILIFWG IAATSYRGTHITVDLLWGNVGPRAQRWIDVFATLVLLFVVTVQTYTLFDKVVTTRADHIVTMDLQMPIWPFFLVAWLGDV AAVVLIAIRTWRLIFHPDELHDPKFKPVE >Mature_188_residues TSDFDRLTNRLPGALPTRRFPKNGMDRFIDVIEWIAAFFVGVVALNTFLAVFMRKFFSVTIPDYYNVGQFLLGILIFWGI AATSYRGTHITVDLLWGNVGPRAQRWIDVFATLVLLFVVTVQTYTLFDKVVTTRADHIVTMDLQMPIWPFFLVAWLGDVA AVVLIAIRTWRLIFHPDELHDPKFKPVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21754; Mature: 21623
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDFDRLTNRLPGALPTRRFPKNGMDRFIDVIEWIAAFFVGVVALNTFLAVFMRKFFSV CCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TIPDYYNVGQFLLGILIFWGIAATSYRGTHITVDLLWGNVGPRAQRWIDVFATLVLLFVV CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH TVQTYTLFDKVVTTRADHIVTMDLQMPIWPFFLVAWLGDVAAVVLIAIRTWRLIFHPDEL HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC HDPKFKPVE CCCCCCCCC >Mature Secondary Structure TSDFDRLTNRLPGALPTRRFPKNGMDRFIDVIEWIAAFFVGVVALNTFLAVFMRKFFSV CCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TIPDYYNVGQFLLGILIFWGIAATSYRGTHITVDLLWGNVGPRAQRWIDVFATLVLLFVV CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH TVQTYTLFDKVVTTRADHIVTMDLQMPIWPFFLVAWLGDVAAVVLIAIRTWRLIFHPDEL HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC HDPKFKPVE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA