Click here to switch to the map view.

The map label for this gene is 86750658

Identifier: 86750658

GI number: 86750658

Start: 4061463

End: 4062266

Strand: Reverse

Name: 86750658

Synonym: RPB_3548

Alternate gene names: NA

Gene position: 4062266-4061463 (Counterclockwise)

Preceding gene: 162138520

Following gene: 86750657

Centisome position: 76.19

GC content: 69.9

Gene sequence:

>804_bases
ATGATGGCGATGAGCAAATCGATGCTGGAGCATCAGGAGCCGGGCGACATCGAGGCGCTGCTGCCCTGGTATGCCGCGGG
CACGCTGAATGCCCGCGACAGCGAGCGCGTGGCCGAAGCGCTGGAGCGAGATCCCGAACTCGCCAAGCAATACGCGGCGG
TGCTCGAAGAATATACCGCGACCATCGAGCTGAACGAAAGCCTCGGCGCGCCGTCGTCGAAGGCGATCCAGAAACTGTTC
GCGGCAATCGACGCCGAGCCGGCGCGTCCGGCCGGGGGCGCGTTGCCGCAGGCGCGGCAGGGGCTCGGCGCGCGGTTCGC
CGGCTTTTTTGTCGGTCTGTCGCCGAAGGCATTGGCTTGGTCGGCCTCCGTCGCCAGCGTCGCGCTGGTGCTGCAGGCCG
GGTTGATCGGCGCGATGCTGGTGTGGACCCCGGCCGGCGTGTTCGAGACCGCCTCCTACCAGCCGCAGGCGGATATGGCT
CCGGCCCCGCGCGCCGAAATGGCGCGGCCGGCCGCGCCTGCTGCGCCGCCTGCCGCGCCTGCGCAGCGCGCCGCGCCGCT
GACGCGAAGCCTCGGCGCCGACAGCGGCTCCCTCCGCGTGTTCGTTCGCTTTACGCCGGACGCCCGCGTGTCCGAAATCA
CGGCGCTGCTCGATGCGTATCAAGCCGCGGTGGTCGACAGCAGCAAGGGTGGCGTGTTTCGGCTGCGCGTCGGCGCCGAC
GCCATGTCGAAGCAGGAGCAGGACAGGCTGATCTCGCGCCTGCAGAACGAAGCGATCGTCGCGATGGTGTTGCCCGCGCC
ATAG

Upstream 100 bases:

>100_bases
TTGTGGGAATTCCGGAGAACACCGTGAAGACCCGACTGTTTTATGCGCGCAAGAAACTGGCCGATCTGCTGCAGGCAGCC
GGCGTGCAGCGAGGCTGGCC

Downstream 100 bases:

>100_bases
CAGGTCCGAGCCGGAGGCTGCGATGAGCGATCGAGCATGGCAAAGGCCGGTATGGATTGCGGCGGTGGCGGCGGCGACGC
TGGTGATGACGGCGGGGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MMAMSKSMLEHQEPGDIEALLPWYAAGTLNARDSERVAEALERDPELAKQYAAVLEEYTATIELNESLGAPSSKAIQKLF
AAIDAEPARPAGGALPQARQGLGARFAGFFVGLSPKALAWSASVASVALVLQAGLIGAMLVWTPAGVFETASYQPQADMA
PAPRAEMARPAAPAAPPAAPAQRAAPLTRSLGADSGSLRVFVRFTPDARVSEITALLDAYQAAVVDSSKGGVFRLRVGAD
AMSKQEQDRLISRLQNEAIVAMVLPAP

Sequences:

>Translated_267_residues
MMAMSKSMLEHQEPGDIEALLPWYAAGTLNARDSERVAEALERDPELAKQYAAVLEEYTATIELNESLGAPSSKAIQKLF
AAIDAEPARPAGGALPQARQGLGARFAGFFVGLSPKALAWSASVASVALVLQAGLIGAMLVWTPAGVFETASYQPQADMA
PAPRAEMARPAAPAAPPAAPAQRAAPLTRSLGADSGSLRVFVRFTPDARVSEITALLDAYQAAVVDSSKGGVFRLRVGAD
AMSKQEQDRLISRLQNEAIVAMVLPAP
>Mature_267_residues
MMAMSKSMLEHQEPGDIEALLPWYAAGTLNARDSERVAEALERDPELAKQYAAVLEEYTATIELNESLGAPSSKAIQKLF
AAIDAEPARPAGGALPQARQGLGARFAGFFVGLSPKALAWSASVASVALVLQAGLIGAMLVWTPAGVFETASYQPQADMA
PAPRAEMARPAAPAAPPAAPAQRAAPLTRSLGADSGSLRVFVRFTPDARVSEITALLDAYQAAVVDSSKGGVFRLRVGAD
AMSKQEQDRLISRLQNEAIVAMVLPAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28008; Mature: 28008

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAMSKSMLEHQEPGDIEALLPWYAAGTLNARDSERVAEALERDPELAKQYAAVLEEYTA
CCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TIELNESLGAPSSKAIQKLFAAIDAEPARPAGGALPQARQGLGARFAGFFVGLSPKALAW
EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCHHHHH
SASVASVALVLQAGLIGAMLVWTPAGVFETASYQPQADMAPAPRAEMARPAAPAAPPAAP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
AQRAAPLTRSLGADSGSLRVFVRFTPDARVSEITALLDAYQAAVVDSSKGGVFRLRVGAD
HHHHCHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEECCH
AMSKQEQDRLISRLQNEAIVAMVLPAP
HHHHHHHHHHHHHHCCCEEEEEEECCC
>Mature Secondary Structure
MMAMSKSMLEHQEPGDIEALLPWYAAGTLNARDSERVAEALERDPELAKQYAAVLEEYTA
CCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TIELNESLGAPSSKAIQKLFAAIDAEPARPAGGALPQARQGLGARFAGFFVGLSPKALAW
EEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCHHHHH
SASVASVALVLQAGLIGAMLVWTPAGVFETASYQPQADMAPAPRAEMARPAAPAAPPAAP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
AQRAAPLTRSLGADSGSLRVFVRFTPDARVSEITALLDAYQAAVVDSSKGGVFRLRVGAD
HHHHCHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEECCH
AMSKQEQDRLISRLQNEAIVAMVLPAP
HHHHHHHHHHHHHHCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA