| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is epr [H]
Identifier: 86750657
GI number: 86750657
Start: 4059770
End: 4061440
Strand: Reverse
Name: epr [H]
Synonym: RPB_3547
Alternate gene names: 86750657
Gene position: 4061440-4059770 (Counterclockwise)
Preceding gene: 86750658
Following gene: 86750656
Centisome position: 76.18
GC content: 69.66
Gene sequence:
>1671_bases ATGAGCGATCGAGCATGGCAAAGGCCGGTATGGATTGCGGCGGTGGCGGCGGCGACGCTGGTGATGACGGCGGGGGTCGC ATTTTCCCAATCGCTGGCGCCTCCACCTCTGACCAACCTTCCGCCAGTCACCACGGCGCCGACCATCACGCCGTCGGTCG GCCCGACCATTCCCGCGCTACGCCCGCCAGGGCCGGACGTGCTGCCGTCGGTCGAGCGTGAGTATCGGCGGCTGCGCGAT GCGCCGCTGCCGCCCTCGCGCTGCAACTATCTCGACAATGGCCGAACCTGCGCCAAGCTGTGGGTGATCGGCGATTGGCG GTCCGTGACCAAGCACAAGCGCGGCAAGGCAAAGGCCGATCGCGTCCGCCGGGCTCCGCCGCAAATCGTCGCCGCGCGCG GGCAGCGCCCGGCGGTCGCCGCTCGCGACCATGTTCCCGGCGAAGTGCTGATCGAATTCGACGGCGGTCTGTCCGAGCAG CAACTCCGTGCGCTGGCGCGACGGCACCGGCTCACGCGCGTCAGCGTTGACACCGTCGCACTGGTCGGGACCCGCATCGG ACTGTTTCGGATCAACGATCGCCGCTCGCCGCAAACGGTCGCACGCGCACTCGCCGCTGACGGTCGGATACGCGCCGCGC AGGCCAATTTCGTCTACACGCTGCAGAGCGATGCCAAGCCCGCTGCCGCCGACAATTCGATGCTGTATCCGCACGGCCGG CTGCGGCTGGCCGAGGCGCATGCGCTGGCGCGCGGACGCGGCATTGTCGTTGCGGTGATCGATTCCGGCGTCGACATCGC CCATCCGGAACTCGTCGGTGCGCTCGCCGGTTCGTTCGACCCGCTCGGCAGCAAGGAGAAGCCGCATCAGCACGGCACCG GCGTCGCCGGGGCGATCGTCGCGCGCGCCAAACTCACCGGTGGCGCACCGGAGGCGAAAATACTGGCGATCCGGGCGTTC GGCGAGGGCAAGACCGGAAGCCAGAGCAGCACGTCTTATCTGATCCTCAAAAGCCTCGATATCGCCCTCGGTCATGGCGC CCGAATCGTCAATATGAGCTTTGCCGGATCGCAGGACCCGCTGATTGCGCGCGGCGTCGCGGCTGCTGCAGCGCGGGGGA TCGTGATGATTGCCGCCGCCGGCAATGCCGGGCCGAAGTCCCCGCCATTGTATCCTGCGGCGCTGCCGGGCGTGATCGCG GTCAGCGCGACGAGTCCGGGCGACACGTTGTTTGCGGCATCGAACCGTGGCCCGCAAATCGCCGTGGCAGCTCCCGGCGT CGACGTCCTGCTGCCGGCGCCCGACGGCAAATACGAGGTGATGACGGGGACGTCGTTCTCTGCAGCATTCGTCAGCGGTA TCGCCGCGCTGATGATCGAGCGCAATCCCACGCTCGTGCCCGATCAGGTGCGGGCCGTTCTGAGCCAGACCGCCCGCGAT CTTGGAGCGCCGGGCCGTGACGATCTGTTCGGGGCCGGCGAAGCCGATGCATTTGCTGCCCTGTCGCGGGTGGACAGCCT GGCGGCCCCGCTGGTTGCGGCGCCCGCGACCGCGCCGCAGCCCTCTGTCGCGACAGCGCAACCTGCGACGCCCGGCGCTG CGTTGGCAGCGCCCGCCGGGGCAGAGCAGGAGGTCGGCCCGGCGCCGGCCGCCGCGATCCCGGCCCGCTGA
Upstream 100 bases:
>100_bases TCGAAGCAGGAGCAGGACAGGCTGATCTCGCGCCTGCAGAACGAAGCGATCGTCGCGATGGTGTTGCCCGCGCCATAGCA GGTCCGAGCCGGAGGCTGCG
Downstream 100 bases:
>100_bases TCGGCGCCGATCAGGTTCGAAAAAAATCTGCGACGGCTTTGAACGTTCGGCCTGGTCTCGATGACGAATAGGTGTGGGAG CGGAAAGCCCCTCCCCAAAG
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MSDRAWQRPVWIAAVAAATLVMTAGVAFSQSLAPPPLTNLPPVTTAPTITPSVGPTIPALRPPGPDVLPSVEREYRRLRD APLPPSRCNYLDNGRTCAKLWVIGDWRSVTKHKRGKAKADRVRRAPPQIVAARGQRPAVAARDHVPGEVLIEFDGGLSEQ QLRALARRHRLTRVSVDTVALVGTRIGLFRINDRRSPQTVARALAADGRIRAAQANFVYTLQSDAKPAAADNSMLYPHGR LRLAEAHALARGRGIVVAVIDSGVDIAHPELVGALAGSFDPLGSKEKPHQHGTGVAGAIVARAKLTGGAPEAKILAIRAF GEGKTGSQSSTSYLILKSLDIALGHGARIVNMSFAGSQDPLIARGVAAAAARGIVMIAAAGNAGPKSPPLYPAALPGVIA VSATSPGDTLFAASNRGPQIAVAAPGVDVLLPAPDGKYEVMTGTSFSAAFVSGIAALMIERNPTLVPDQVRAVLSQTARD LGAPGRDDLFGAGEADAFAALSRVDSLAAPLVAAPATAPQPSVATAQPATPGAALAAPAGAEQEVGPAPAAAIPAR
Sequences:
>Translated_556_residues MSDRAWQRPVWIAAVAAATLVMTAGVAFSQSLAPPPLTNLPPVTTAPTITPSVGPTIPALRPPGPDVLPSVEREYRRLRD APLPPSRCNYLDNGRTCAKLWVIGDWRSVTKHKRGKAKADRVRRAPPQIVAARGQRPAVAARDHVPGEVLIEFDGGLSEQ QLRALARRHRLTRVSVDTVALVGTRIGLFRINDRRSPQTVARALAADGRIRAAQANFVYTLQSDAKPAAADNSMLYPHGR LRLAEAHALARGRGIVVAVIDSGVDIAHPELVGALAGSFDPLGSKEKPHQHGTGVAGAIVARAKLTGGAPEAKILAIRAF GEGKTGSQSSTSYLILKSLDIALGHGARIVNMSFAGSQDPLIARGVAAAAARGIVMIAAAGNAGPKSPPLYPAALPGVIA VSATSPGDTLFAASNRGPQIAVAAPGVDVLLPAPDGKYEVMTGTSFSAAFVSGIAALMIERNPTLVPDQVRAVLSQTARD LGAPGRDDLFGAGEADAFAALSRVDSLAAPLVAAPATAPQPSVATAQPATPGAALAAPAGAEQEVGPAPAAAIPAR >Mature_555_residues SDRAWQRPVWIAAVAAATLVMTAGVAFSQSLAPPPLTNLPPVTTAPTITPSVGPTIPALRPPGPDVLPSVEREYRRLRDA PLPPSRCNYLDNGRTCAKLWVIGDWRSVTKHKRGKAKADRVRRAPPQIVAARGQRPAVAARDHVPGEVLIEFDGGLSEQQ LRALARRHRLTRVSVDTVALVGTRIGLFRINDRRSPQTVARALAADGRIRAAQANFVYTLQSDAKPAAADNSMLYPHGRL RLAEAHALARGRGIVVAVIDSGVDIAHPELVGALAGSFDPLGSKEKPHQHGTGVAGAIVARAKLTGGAPEAKILAIRAFG EGKTGSQSSTSYLILKSLDIALGHGARIVNMSFAGSQDPLIARGVAAAAARGIVMIAAAGNAGPKSPPLYPAALPGVIAV SATSPGDTLFAASNRGPQIAVAAPGVDVLLPAPDGKYEVMTGTSFSAAFVSGIAALMIERNPTLVPDQVRAVLSQTARDL GAPGRDDLFGAGEADAFAALSRVDSLAAPLVAAPATAPQPSVATAQPATPGAALAAPAGAEQEVGPAPAAAIPAR
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319893, Length=240, Percent_Identity=26.6666666666667, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320775, Length=251, Percent_Identity=27.4900398406374, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI45550681, Length=311, Percent_Identity=26.0450160771704, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 57151; Mature: 57020
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRAWQRPVWIAAVAAATLVMTAGVAFSQSLAPPPLTNLPPVTTAPTITPSVGPTIPAL CCCCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPPGPDVLPSVEREYRRLRDAPLPPSRCNYLDNGRTCAKLWVIGDWRSVTKHKRGKAKAD CCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEEEEECHHHHHHHHCCCCHHH RVRRAPPQIVAARGQRPAVAARDHVPGEVLIEFDGGLSEQQLRALARRHRLTRVSVDTVA HHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEEEHHHEE LVGTRIGLFRINDRRSPQTVARALAADGRIRAAQANFVYTLQSDAKPAAADNSMLYPHGR EECCEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCCEECCCCC LRLAEAHALARGRGIVVAVIDSGVDIAHPELVGALAGSFDPLGSKEKPHQHGTGVAGAIV EEEHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH ARAKLTGGAPEAKILAIRAFGEGKTGSQSSTSYLILKSLDIALGHGARIVNMSFAGSQDP HHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCC LIARGVAAAAARGIVMIAAAGNAGPKSPPLYPAALPGVIAVSATSPGDTLFAASNRGPQI HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEE AVAAPGVDVLLPAPDGKYEVMTGTSFSAAFVSGIAALMIERNPTLVPDQVRAVLSQTARD EEECCCCEEEEECCCCCEEEEECCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHH LGAPGRDDLFGAGEADAFAALSRVDSLAAPLVAAPATAPQPSVATAQPATPGAALAAPAG HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCC AEQEVGPAPAAAIPAR CCCCCCCCCCCCCCCC >Mature Secondary Structure SDRAWQRPVWIAAVAAATLVMTAGVAFSQSLAPPPLTNLPPVTTAPTITPSVGPTIPAL CCCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPPGPDVLPSVEREYRRLRDAPLPPSRCNYLDNGRTCAKLWVIGDWRSVTKHKRGKAKAD CCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCEEEEEEEEECHHHHHHHHCCCCHHH RVRRAPPQIVAARGQRPAVAARDHVPGEVLIEFDGGLSEQQLRALARRHRLTRVSVDTVA HHHCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHEEEEHHHEE LVGTRIGLFRINDRRSPQTVARALAADGRIRAAQANFVYTLQSDAKPAAADNSMLYPHGR EECCEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCCEECCCCC LRLAEAHALARGRGIVVAVIDSGVDIAHPELVGALAGSFDPLGSKEKPHQHGTGVAGAIV EEEHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH ARAKLTGGAPEAKILAIRAFGEGKTGSQSSTSYLILKSLDIALGHGARIVNMSFAGSQDP HHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCC LIARGVAAAAARGIVMIAAAGNAGPKSPPLYPAALPGVIAVSATSPGDTLFAASNRGPQI HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEE AVAAPGVDVLLPAPDGKYEVMTGTSFSAAFVSGIAALMIERNPTLVPDQVRAVLSQTARD EEECCCCEEEEECCCCCEEEEECCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHH LGAPGRDDLFGAGEADAFAALSRVDSLAAPLVAAPATAPQPSVATAQPATPGAALAAPAG HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCC AEQEVGPAPAAAIPAR CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2116590; 3142851; 7934828; 9384377 [H]