| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is argK [C]
Identifier: 86750652
GI number: 86750652
Start: 4052935
End: 4053927
Strand: Direct
Name: argK [C]
Synonym: RPB_3542
Alternate gene names: 86750652
Gene position: 4052935-4053927 (Clockwise)
Preceding gene: 86750651
Following gene: 86750653
Centisome position: 76.02
GC content: 68.78
Gene sequence:
>993_bases ATGAACGCGCCAAGTAAGAAGCCGCTCGATCTGCCGTCGCTGGCGGGCGAGGTCCGCGCCGGCAATCGCGCAGCGCTGGC GCGCGCGATCACGCTGATCGAGAGCCGCCGCGCCGATCATCAGGCGTCCGCGCGCGCGCTGGTGCAGGAGCTGCTGCCGC AGACCGGCCGCGCGATCCGTGTCGGCATCACCGGCTCGCCCGGCGTCGGCAAATCGACGACGATCGACGAACTCGGGATG TATCTGATCGCGCAGGGCAACAAGGTCGCGGTGCTGGCGGTCGATCCATCTTCCGCGCGCACCGGCGGCTCGATCCTCGG CGACAAGACGCGGATGGCGCGGCTCTCCGCCGAACCCGACGCCTTCATCCGTCCCTCGCCGTCGTCGGGCACGCTCGGCG GCGTCGCGGCGAAGACGCGCGAGGCAATGCTGCTGTGCGAGGCCGCCGGCTTCGACGTGGTGCTGGTCGAGACCGTCGGC ATCGGCCAGTCCGAGACCGCTGTCTGCGACATGACCGATTTCTTCCTCGCGCTGATGCTGCCGGGTGCCGGCGACGAGTT GCAGGGCATCAAGAAGGGTCTGGTCGAACTCGCCGACATGATCGCGATCAACAAGGCCGACGGCGACAATATCGCCCGCG CCAATCTCGCCGCCGGCGAATATCGCGCCGCGCTGCATATCCTCACCCCGCGCTCGCCGCATTGGCAGCCGCCGGTGGTG ACCTATTCGGCGATCACCGGGACAGGCATCGCCGAACTGTGGCAGAGCGTCCTCGATCATCGCACGGCCACGACCGCACC CGGCGAATTCGACGCGCGACGGCGCGAGCAGCAGGTGAAGTGGATGTGGACGATGCTCGAGGATCGCTGGAAGGCACGGC TGAAGAGCGACCCCGCGATCCGCGCCAAGGTGAAGTCCACAGAAGCCGCCGTCGCCGAAGGCCGCGTCACGCCGGCGATC GGCGCCGACCAGATCGCGGAGCTCCTGGCATGA
Upstream 100 bases:
>100_bases GAGGGTAGCTACGACGCCTACGTGCCGTGGCAGAGTCTGAAGCCGTATCTGTCCGCGGAAGGCACCGCGATCTTTGGCGG CGATCGGCCGAAAGGCGACG
Downstream 100 bases:
>100_bases GCGCGCTGCGCATCCTGATCACCGGGTTCGGCCCGTTTCCCGGTGCGCCGTTCAATCCGACGCCGGCGCTGGTCGCGCGG CTGATGAATTTGCGGCGGCC
Product: arginine/ornithine transport system ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNAPSKKPLDLPSLAGEVRAGNRAALARAITLIESRRADHQASARALVQELLPQTGRAIRVGITGSPGVGKSTTIDELGM YLIAQGNKVAVLAVDPSSARTGGSILGDKTRMARLSAEPDAFIRPSPSSGTLGGVAAKTREAMLLCEAAGFDVVLVETVG IGQSETAVCDMTDFFLALMLPGAGDELQGIKKGLVELADMIAINKADGDNIARANLAAGEYRAALHILTPRSPHWQPPVV TYSAITGTGIAELWQSVLDHRTATTAPGEFDARRREQQVKWMWTMLEDRWKARLKSDPAIRAKVKSTEAAVAEGRVTPAI GADQIAELLA
Sequences:
>Translated_330_residues MNAPSKKPLDLPSLAGEVRAGNRAALARAITLIESRRADHQASARALVQELLPQTGRAIRVGITGSPGVGKSTTIDELGM YLIAQGNKVAVLAVDPSSARTGGSILGDKTRMARLSAEPDAFIRPSPSSGTLGGVAAKTREAMLLCEAAGFDVVLVETVG IGQSETAVCDMTDFFLALMLPGAGDELQGIKKGLVELADMIAINKADGDNIARANLAAGEYRAALHILTPRSPHWQPPVV TYSAITGTGIAELWQSVLDHRTATTAPGEFDARRREQQVKWMWTMLEDRWKARLKSDPAIRAKVKSTEAAVAEGRVTPAI GADQIAELLA >Mature_330_residues MNAPSKKPLDLPSLAGEVRAGNRAALARAITLIESRRADHQASARALVQELLPQTGRAIRVGITGSPGVGKSTTIDELGM YLIAQGNKVAVLAVDPSSARTGGSILGDKTRMARLSAEPDAFIRPSPSSGTLGGVAAKTREAMLLCEAAGFDVVLVETVG IGQSETAVCDMTDFFLALMLPGAGDELQGIKKGLVELADMIAINKADGDNIARANLAAGEYRAALHILTPRSPHWQPPVV TYSAITGTGIAELWQSVLDHRTATTAPGEFDARRREQQVKWMWTMLEDRWKARLKSDPAIRAKVKSTEAAVAEGRVTPAI GADQIAELLA
Specific function: May have GTPase activity. May also bind and hydrolyze ATP. May function as chaperone [H]
COG id: COG1703
COG function: function code E; Putative periplasmic protein kinase ArgK and related GTPases of G3E family
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgK family [H]
Homologues:
Organism=Homo sapiens, GI26892295, Length=313, Percent_Identity=46.9648562300319, Blast_Score=296, Evalue=1e-80, Organism=Escherichia coli, GI1789285, Length=312, Percent_Identity=49.6794871794872, Blast_Score=310, Evalue=1e-85, Organism=Caenorhabditis elegans, GI71994271, Length=327, Percent_Identity=41.8960244648318, Blast_Score=265, Evalue=2e-71, Organism=Caenorhabditis elegans, GI71994275, Length=268, Percent_Identity=44.0298507462687, Blast_Score=245, Evalue=3e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005129 - InterPro: IPR003593 [H]
Pfam domain/function: PF03308 ArgK [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 34934; Mature: 34934
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPSKKPLDLPSLAGEVRAGNRAALARAITLIESRRADHQASARALVQELLPQTGRAIR CCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEE VGITGSPGVGKSTTIDELGMYLIAQGNKVAVLAVDPSSARTGGSILGDKTRMARLSAEPD EEECCCCCCCCCCCHHHCCEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCC AFIRPSPSSGTLGGVAAKTREAMLLCEAAGFDVVLVETVGIGQSETAVCDMTDFFLALML CEECCCCCCCCCCCHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHC PGAGDELQGIKKGLVELADMIAINKADGDNIARANLAAGEYRAALHILTPRSPHWQPPVV CCCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEHHCCCCCEEEEEEEECCCCCCCCCCEE TYSAITGTGIAELWQSVLDHRTATTAPGEFDARRREQQVKWMWTMLEDRWKARLKSDPAI EEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RAKVKSTEAAVAEGRVTPAIGADQIAELLA EEEHHHHHHHHHCCCCCCCCCHHHHHHHHC >Mature Secondary Structure MNAPSKKPLDLPSLAGEVRAGNRAALARAITLIESRRADHQASARALVQELLPQTGRAIR CCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEE VGITGSPGVGKSTTIDELGMYLIAQGNKVAVLAVDPSSARTGGSILGDKTRMARLSAEPD EEECCCCCCCCCCCHHHCCEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCC AFIRPSPSSGTLGGVAAKTREAMLLCEAAGFDVVLVETVGIGQSETAVCDMTDFFLALML CEECCCCCCCCCCCHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHC PGAGDELQGIKKGLVELADMIAINKADGDNIARANLAAGEYRAALHILTPRSPHWQPPVV CCCCHHHHHHHHHHHHHHHHHHEECCCCCCCEEHHCCCCCEEEEEEEECCCCCCCCCCEE TYSAITGTGIAELWQSVLDHRTATTAPGEFDARRREQQVKWMWTMLEDRWKARLKSDPAI EEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RAKVKSTEAAVAEGRVTPAIGADQIAELLA EEEHHHHHHHHHCCCCCCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Arg [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]