| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is folB [H]
Identifier: 86750644
GI number: 86750644
Start: 4045866
End: 4046243
Strand: Direct
Name: folB [H]
Synonym: RPB_3534
Alternate gene names: 86750644
Gene position: 4045866-4046243 (Clockwise)
Preceding gene: 86750643
Following gene: 86750645
Centisome position: 75.88
GC content: 66.14
Gene sequence:
>378_bases ATGACCGACACCATCTTCATCACCGGCCTGGTGCTGCACGCGCGGCACGGCGTGATGGATCACGAGACCGAAGTCGGCCA GCGCTTCGTGATCGATCTCGAACTCGCCGCCGACCTCACCGAGTCCTCGCGCACCGATCGCCTCGCCGACACCGTGTCCT ATTCCAACGTGGTGGCCTGCGCCACCGCGGCGTTCAAGGACGCCAACTACAAACTGCTCGAACGCGCCGCCGGCGCGGTC GCCGACGCGATCCTGGCGGCATTCGACAAAATCGGTTCGGTGAAGATCACCGTGCACAAGCCGCACGCGCCGATCGCGGC GATCTTCGACGACGTCGGCGTGATCATCACCCGCGCGCGGCAGCCCTCGCATGGCTGA
Upstream 100 bases:
>100_bases TGGAGAACGGCGCGCGAATCATCCGCGCCCACGACGTCGCCGACACCGCGCAGGCGCTCAAAGTCGCGCACGCGATCAGG ACCAGCAGCGAGGACAGACG
Downstream 100 bases:
>100_bases GGCGCTGATCGCGCTCGGCGGCAATGTCGGCGACGTCCGCGCGACGTTCGACAAGGCGATCGCCAATATCTGCGGCATGA CGCAGGGCGAACTGCTCGCC
Product: dihydroneopterin aldolase
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MTDTIFITGLVLHARHGVMDHETEVGQRFVIDLELAADLTESSRTDRLADTVSYSNVVACATAAFKDANYKLLERAAGAV ADAILAAFDKIGSVKITVHKPHAPIAAIFDDVGVIITRARQPSHG
Sequences:
>Translated_125_residues MTDTIFITGLVLHARHGVMDHETEVGQRFVIDLELAADLTESSRTDRLADTVSYSNVVACATAAFKDANYKLLERAAGAV ADAILAAFDKIGSVKITVHKPHAPIAAIFDDVGVIITRARQPSHG >Mature_124_residues TDTIFITGLVLHARHGVMDHETEVGQRFVIDLELAADLTESSRTDRLADTVSYSNVVACATAAFKDANYKLLERAAGAVA DAILAAFDKIGSVKITVHKPHAPIAAIFDDVGVIITRARQPSHG
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin [H]
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
Organism=Escherichia coli, GI87082204, Length=116, Percent_Identity=35.3448275862069, Blast_Score=67, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 13384; Mature: 13253
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTIFITGLVLHARHGVMDHETEVGQRFVIDLELAADLTESSRTDRLADTVSYSNVVAC CCCEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHH ATAAFKDANYKLLERAAGAVADAILAAFDKIGSVKITVHKPHAPIAAIFDDVGVIITRAR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHEEECCC QPSHG CCCCC >Mature Secondary Structure TDTIFITGLVLHARHGVMDHETEVGQRFVIDLELAADLTESSRTDRLADTVSYSNVVAC CCEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHH ATAAFKDANYKLLERAAGAVADAILAAFDKIGSVKITVHKPHAPIAAIFDDVGVIITRAR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHEEECCC QPSHG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]