| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750614
Identifier: 86750614
GI number: 86750614
Start: 4010789
End: 4012585
Strand: Direct
Name: 86750614
Synonym: RPB_3504
Alternate gene names: NA
Gene position: 4010789-4012585 (Clockwise)
Preceding gene: 86750612
Following gene: 86750616
Centisome position: 75.23
GC content: 63.33
Gene sequence:
>1797_bases ATGACGATCAGGCGAGTTTTCGTCGCGACGTTCATACTGTCGCTCACTCCCGTGGTTTCCACGGCCCAGCCGGTGCTTCA GACACAATCGCTCGACGACTTCCGGCGAATCCTCAGTCCCGGCCTGATTTCGCGCGAGGTGACCAGCGAAAAGGTGAGTC AACTCAACGCGGAGGCTGCGAAGAGCTGCTTCGCCCCCGACGCGTTTCAGCGCGCGATCCCGGCACTGCCGATCAGATAT AAGCGGCCACTTCCTTGCGCCCCGCAGAATGCGTTCGACCGGTTCGTGATGTGGAATCAGATCGCACTCGACACCACATC GATGGATCATGCTCCGCCGCCATTGGGCACGCCGGACAATCCCGCCCTGCACAATTACGGCCCGCACCGCTCGAGCCGGG TGATGGCGATCGTTCACATCGCGATGTTCGACGCGATCAATCTGGCGATGCGGTTCGACTCGAAATCACCCGACAAGCCG AGATACGTGTTCGCGACCTATCTGCAGGGCATTCCCAATCCGAAAGAAGACGCCTCGGTCGACATGGCGATCACGTATTC GGCGGGTGAGACCCTGAAGGCGCTTTATCCTCAACAGGTGGATGTGATCGAGAATCTCATCGCCATCGACGAGGGCGCCG TCCTGAGCGGCAAGGATCGCAACGCGCCGATGTATCGGGCCGGCCGCGAACTCGGAATCACCGTCGCGAAGGCGATTCTC CGGGCACGCCGGAACGACGGCTCGGCGCACGAAGAGCCGCAGGTCGGCGATCCTGGCTTTCCGCTCGCGGAAAAATCAGG TCAGTGGCGACCCGACCCCGTCAGCAACATCGCCGCGGCGCTCGGCGGCAAGTGGAAGGACGTTCAGCCGTTCGTCATCA AGAACGTGCCGACCTTCCGGCCGCCCCCGCCGCCGTCGACCGACAGCGCCGAATACGCCCGGGACTTCGAAGAGGTCAGG AAGCTCGGCGGCGAGAACACCGAGCGCTCGAGGTCTGAACGCAGTGCGGACCAGACACTGATCGGAACGTTCTGGGCTTA TGACGGCACCGCTTTCCTGTGCGCTCCGCCGCGGCTCTACAATCAGGTGATCCGGCAGATCGTGCAGCAGCAGATCAAGG ACGGCGATACCAAGGACGAGGATCCGAAGCTGCTCAACTACGCCCGATTGTTCGCGCTCGCCAACATCGCAATGGCGGAC GCGGCGATCGCCGCATGGGACGCAAAGTATCACTATCGCTACTGGCGCCCGGTCGTCGGCATTCGGGCGGCCGCGACCGA CGGCAACGATGCCACCCATGCCGACGTCTACTGGAAGGCGCTGGGGGCCCCGGCCAGCAACTCCGTTCGCGGTCCCAACT TCACGCCTCCTTTCCCGGCCTATCCTTCCGGACACGCCACGTTCGGCGGCGCTCTGTTCGAAGTGCTGCGCGCGTTCTAC CCGGACGACACGTCCTTCAGCTTCATCTCCGACGAGTACAACGGGCAAAACAAGCCGGCCGGCTCGGACGTGCCGCGACC GGAAGTGACCCGACGCTTCGTCAACTTCCGCGCGGCGGAGGACGAAAATGCGCGCAGCCGGGTCTATCTCGGTGTGCACT GGCAGTTCGATGCCGATGCCGGGATCGCGCAGGGCAACCAGGTCGGCAGCTTCGTGGTCGGCAGCACGCTGCGCTGTCTC GACGATGACGGCAGAGCGCTGGATTGCAAACCGGGCAGCGGATTCGACGTCAAGCGCAAGTTCCTGATCTCGACGGAGAA GCGGGTGCTGAGCACTCCGTTCACTCCGTCCCAGTAA
Upstream 100 bases:
>100_bases ACTACGCGACTTGACGATACGCGATCACTCATCCAGTCTGACCAAGTTGCTATTTATTGTCATTTTTACTTTTTGATGAT TCCATCCGCGAGGTATTGCC
Downstream 100 bases:
>100_bases GAAGATCGCGCGCAGGAGCAAGATCGCGAGCGTCGGGCTGAGCAGCAGGTGGTCGATGCGCAGCCCGGCGTCGCACGCGT AGCGGGTCCGCCGACAGAAC
Product: chloride peroxidase
Products: NA
Alternate protein names: Chloride Peroxidase; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Superfamily Protein; Haloperoxidase; Phosphoesterase; VaNADium Chloroperoxidase
Number of amino acids: Translated: 598; Mature: 597
Protein sequence:
>598_residues MTIRRVFVATFILSLTPVVSTAQPVLQTQSLDDFRRILSPGLISREVTSEKVSQLNAEAAKSCFAPDAFQRAIPALPIRY KRPLPCAPQNAFDRFVMWNQIALDTTSMDHAPPPLGTPDNPALHNYGPHRSSRVMAIVHIAMFDAINLAMRFDSKSPDKP RYVFATYLQGIPNPKEDASVDMAITYSAGETLKALYPQQVDVIENLIAIDEGAVLSGKDRNAPMYRAGRELGITVAKAIL RARRNDGSAHEEPQVGDPGFPLAEKSGQWRPDPVSNIAAALGGKWKDVQPFVIKNVPTFRPPPPPSTDSAEYARDFEEVR KLGGENTERSRSERSADQTLIGTFWAYDGTAFLCAPPRLYNQVIRQIVQQQIKDGDTKDEDPKLLNYARLFALANIAMAD AAIAAWDAKYHYRYWRPVVGIRAAATDGNDATHADVYWKALGAPASNSVRGPNFTPPFPAYPSGHATFGGALFEVLRAFY PDDTSFSFISDEYNGQNKPAGSDVPRPEVTRRFVNFRAAEDENARSRVYLGVHWQFDADAGIAQGNQVGSFVVGSTLRCL DDDGRALDCKPGSGFDVKRKFLISTEKRVLSTPFTPSQ
Sequences:
>Translated_598_residues MTIRRVFVATFILSLTPVVSTAQPVLQTQSLDDFRRILSPGLISREVTSEKVSQLNAEAAKSCFAPDAFQRAIPALPIRY KRPLPCAPQNAFDRFVMWNQIALDTTSMDHAPPPLGTPDNPALHNYGPHRSSRVMAIVHIAMFDAINLAMRFDSKSPDKP RYVFATYLQGIPNPKEDASVDMAITYSAGETLKALYPQQVDVIENLIAIDEGAVLSGKDRNAPMYRAGRELGITVAKAIL RARRNDGSAHEEPQVGDPGFPLAEKSGQWRPDPVSNIAAALGGKWKDVQPFVIKNVPTFRPPPPPSTDSAEYARDFEEVR KLGGENTERSRSERSADQTLIGTFWAYDGTAFLCAPPRLYNQVIRQIVQQQIKDGDTKDEDPKLLNYARLFALANIAMAD AAIAAWDAKYHYRYWRPVVGIRAAATDGNDATHADVYWKALGAPASNSVRGPNFTPPFPAYPSGHATFGGALFEVLRAFY PDDTSFSFISDEYNGQNKPAGSDVPRPEVTRRFVNFRAAEDENARSRVYLGVHWQFDADAGIAQGNQVGSFVVGSTLRCL DDDGRALDCKPGSGFDVKRKFLISTEKRVLSTPFTPSQ >Mature_597_residues TIRRVFVATFILSLTPVVSTAQPVLQTQSLDDFRRILSPGLISREVTSEKVSQLNAEAAKSCFAPDAFQRAIPALPIRYK RPLPCAPQNAFDRFVMWNQIALDTTSMDHAPPPLGTPDNPALHNYGPHRSSRVMAIVHIAMFDAINLAMRFDSKSPDKPR YVFATYLQGIPNPKEDASVDMAITYSAGETLKALYPQQVDVIENLIAIDEGAVLSGKDRNAPMYRAGRELGITVAKAILR ARRNDGSAHEEPQVGDPGFPLAEKSGQWRPDPVSNIAAALGGKWKDVQPFVIKNVPTFRPPPPPSTDSAEYARDFEEVRK LGGENTERSRSERSADQTLIGTFWAYDGTAFLCAPPRLYNQVIRQIVQQQIKDGDTKDEDPKLLNYARLFALANIAMADA AIAAWDAKYHYRYWRPVVGIRAAATDGNDATHADVYWKALGAPASNSVRGPNFTPPFPAYPSGHATFGGALFEVLRAFYP DDTSFSFISDEYNGQNKPAGSDVPRPEVTRRFVNFRAAEDENARSRVYLGVHWQFDADAGIAQGNQVGSFVVGSTLRCLD DDGRALDCKPGSGFDVKRKFLISTEKRVLSTPFTPSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65943; Mature: 65812
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRRVFVATFILSLTPVVSTAQPVLQTQSLDDFRRILSPGLISREVTSEKVSQLNAEAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KSCFAPDAFQRAIPALPIRYKRPLPCAPQNAFDRFVMWNQIALDTTSMDHAPPPLGTPDN HHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC PALHNYGPHRSSRVMAIVHIAMFDAINLAMRFDSKSPDKPRYVFATYLQGIPNPKEDASV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCE DMAITYSAGETLKALYPQQVDVIENLIAIDEGAVLSGKDRNAPMYRAGRELGITVAKAIL EEEEEECCCCHHHHHCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHCCHHHHHHHHHHHH RARRNDGSAHEEPQVGDPGFPLAEKSGQWRPDPVSNIAAALGGKWKDVQPFVIKNVPTFR HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCC PPPPPSTDSAEYARDFEEVRKLGGENTERSRSERSADQTLIGTFWAYDGTAFLCAPPRLY CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHEEEEEEECCCEEEEECCHHHH NQVIRQIVQQQIKDGDTKDEDPKLLNYARLFALANIAMADAAIAAWDAKYHYRYWRPVVG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC IRAAATDGNDATHADVYWKALGAPASNSVRGPNFTPPFPAYPSGHATFGGALFEVLRAFY EEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC PDDTSFSFISDEYNGQNKPAGSDVPRPEVTRRFVNFRAAEDENARSRVYLGVHWQFDADA CCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCC GIAQGNQVGSFVVGSTLRCLDDDGRALDCKPGSGFDVKRKFLISTEKRVLSTPFTPSQ CCCCCCCCCCHHHCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TIRRVFVATFILSLTPVVSTAQPVLQTQSLDDFRRILSPGLISREVTSEKVSQLNAEAA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KSCFAPDAFQRAIPALPIRYKRPLPCAPQNAFDRFVMWNQIALDTTSMDHAPPPLGTPDN HHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC PALHNYGPHRSSRVMAIVHIAMFDAINLAMRFDSKSPDKPRYVFATYLQGIPNPKEDASV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCE DMAITYSAGETLKALYPQQVDVIENLIAIDEGAVLSGKDRNAPMYRAGRELGITVAKAIL EEEEEECCCCHHHHHCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHCCHHHHHHHHHHHH RARRNDGSAHEEPQVGDPGFPLAEKSGQWRPDPVSNIAAALGGKWKDVQPFVIKNVPTFR HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCC PPPPPSTDSAEYARDFEEVRKLGGENTERSRSERSADQTLIGTFWAYDGTAFLCAPPRLY CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHEEEEEEECCCEEEEECCHHHH NQVIRQIVQQQIKDGDTKDEDPKLLNYARLFALANIAMADAAIAAWDAKYHYRYWRPVVG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC IRAAATDGNDATHADVYWKALGAPASNSVRGPNFTPPFPAYPSGHATFGGALFEVLRAFY EEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC PDDTSFSFISDEYNGQNKPAGSDVPRPEVTRRFVNFRAAEDENARSRVYLGVHWQFDADA CCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCC GIAQGNQVGSFVVGSTLRCLDDDGRALDCKPGSGFDVKRKFLISTEKRVLSTPFTPSQ CCCCCCCCCCHHHCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA