Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86750614

Identifier: 86750614

GI number: 86750614

Start: 4010789

End: 4012585

Strand: Direct

Name: 86750614

Synonym: RPB_3504

Alternate gene names: NA

Gene position: 4010789-4012585 (Clockwise)

Preceding gene: 86750612

Following gene: 86750616

Centisome position: 75.23

GC content: 63.33

Gene sequence:

>1797_bases
ATGACGATCAGGCGAGTTTTCGTCGCGACGTTCATACTGTCGCTCACTCCCGTGGTTTCCACGGCCCAGCCGGTGCTTCA
GACACAATCGCTCGACGACTTCCGGCGAATCCTCAGTCCCGGCCTGATTTCGCGCGAGGTGACCAGCGAAAAGGTGAGTC
AACTCAACGCGGAGGCTGCGAAGAGCTGCTTCGCCCCCGACGCGTTTCAGCGCGCGATCCCGGCACTGCCGATCAGATAT
AAGCGGCCACTTCCTTGCGCCCCGCAGAATGCGTTCGACCGGTTCGTGATGTGGAATCAGATCGCACTCGACACCACATC
GATGGATCATGCTCCGCCGCCATTGGGCACGCCGGACAATCCCGCCCTGCACAATTACGGCCCGCACCGCTCGAGCCGGG
TGATGGCGATCGTTCACATCGCGATGTTCGACGCGATCAATCTGGCGATGCGGTTCGACTCGAAATCACCCGACAAGCCG
AGATACGTGTTCGCGACCTATCTGCAGGGCATTCCCAATCCGAAAGAAGACGCCTCGGTCGACATGGCGATCACGTATTC
GGCGGGTGAGACCCTGAAGGCGCTTTATCCTCAACAGGTGGATGTGATCGAGAATCTCATCGCCATCGACGAGGGCGCCG
TCCTGAGCGGCAAGGATCGCAACGCGCCGATGTATCGGGCCGGCCGCGAACTCGGAATCACCGTCGCGAAGGCGATTCTC
CGGGCACGCCGGAACGACGGCTCGGCGCACGAAGAGCCGCAGGTCGGCGATCCTGGCTTTCCGCTCGCGGAAAAATCAGG
TCAGTGGCGACCCGACCCCGTCAGCAACATCGCCGCGGCGCTCGGCGGCAAGTGGAAGGACGTTCAGCCGTTCGTCATCA
AGAACGTGCCGACCTTCCGGCCGCCCCCGCCGCCGTCGACCGACAGCGCCGAATACGCCCGGGACTTCGAAGAGGTCAGG
AAGCTCGGCGGCGAGAACACCGAGCGCTCGAGGTCTGAACGCAGTGCGGACCAGACACTGATCGGAACGTTCTGGGCTTA
TGACGGCACCGCTTTCCTGTGCGCTCCGCCGCGGCTCTACAATCAGGTGATCCGGCAGATCGTGCAGCAGCAGATCAAGG
ACGGCGATACCAAGGACGAGGATCCGAAGCTGCTCAACTACGCCCGATTGTTCGCGCTCGCCAACATCGCAATGGCGGAC
GCGGCGATCGCCGCATGGGACGCAAAGTATCACTATCGCTACTGGCGCCCGGTCGTCGGCATTCGGGCGGCCGCGACCGA
CGGCAACGATGCCACCCATGCCGACGTCTACTGGAAGGCGCTGGGGGCCCCGGCCAGCAACTCCGTTCGCGGTCCCAACT
TCACGCCTCCTTTCCCGGCCTATCCTTCCGGACACGCCACGTTCGGCGGCGCTCTGTTCGAAGTGCTGCGCGCGTTCTAC
CCGGACGACACGTCCTTCAGCTTCATCTCCGACGAGTACAACGGGCAAAACAAGCCGGCCGGCTCGGACGTGCCGCGACC
GGAAGTGACCCGACGCTTCGTCAACTTCCGCGCGGCGGAGGACGAAAATGCGCGCAGCCGGGTCTATCTCGGTGTGCACT
GGCAGTTCGATGCCGATGCCGGGATCGCGCAGGGCAACCAGGTCGGCAGCTTCGTGGTCGGCAGCACGCTGCGCTGTCTC
GACGATGACGGCAGAGCGCTGGATTGCAAACCGGGCAGCGGATTCGACGTCAAGCGCAAGTTCCTGATCTCGACGGAGAA
GCGGGTGCTGAGCACTCCGTTCACTCCGTCCCAGTAA

Upstream 100 bases:

>100_bases
ACTACGCGACTTGACGATACGCGATCACTCATCCAGTCTGACCAAGTTGCTATTTATTGTCATTTTTACTTTTTGATGAT
TCCATCCGCGAGGTATTGCC

Downstream 100 bases:

>100_bases
GAAGATCGCGCGCAGGAGCAAGATCGCGAGCGTCGGGCTGAGCAGCAGGTGGTCGATGCGCAGCCCGGCGTCGCACGCGT
AGCGGGTCCGCCGACAGAAC

Product: chloride peroxidase

Products: NA

Alternate protein names: Chloride Peroxidase; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Superfamily Protein; Haloperoxidase; Phosphoesterase; VaNADium Chloroperoxidase

Number of amino acids: Translated: 598; Mature: 597

Protein sequence:

>598_residues
MTIRRVFVATFILSLTPVVSTAQPVLQTQSLDDFRRILSPGLISREVTSEKVSQLNAEAAKSCFAPDAFQRAIPALPIRY
KRPLPCAPQNAFDRFVMWNQIALDTTSMDHAPPPLGTPDNPALHNYGPHRSSRVMAIVHIAMFDAINLAMRFDSKSPDKP
RYVFATYLQGIPNPKEDASVDMAITYSAGETLKALYPQQVDVIENLIAIDEGAVLSGKDRNAPMYRAGRELGITVAKAIL
RARRNDGSAHEEPQVGDPGFPLAEKSGQWRPDPVSNIAAALGGKWKDVQPFVIKNVPTFRPPPPPSTDSAEYARDFEEVR
KLGGENTERSRSERSADQTLIGTFWAYDGTAFLCAPPRLYNQVIRQIVQQQIKDGDTKDEDPKLLNYARLFALANIAMAD
AAIAAWDAKYHYRYWRPVVGIRAAATDGNDATHADVYWKALGAPASNSVRGPNFTPPFPAYPSGHATFGGALFEVLRAFY
PDDTSFSFISDEYNGQNKPAGSDVPRPEVTRRFVNFRAAEDENARSRVYLGVHWQFDADAGIAQGNQVGSFVVGSTLRCL
DDDGRALDCKPGSGFDVKRKFLISTEKRVLSTPFTPSQ

Sequences:

>Translated_598_residues
MTIRRVFVATFILSLTPVVSTAQPVLQTQSLDDFRRILSPGLISREVTSEKVSQLNAEAAKSCFAPDAFQRAIPALPIRY
KRPLPCAPQNAFDRFVMWNQIALDTTSMDHAPPPLGTPDNPALHNYGPHRSSRVMAIVHIAMFDAINLAMRFDSKSPDKP
RYVFATYLQGIPNPKEDASVDMAITYSAGETLKALYPQQVDVIENLIAIDEGAVLSGKDRNAPMYRAGRELGITVAKAIL
RARRNDGSAHEEPQVGDPGFPLAEKSGQWRPDPVSNIAAALGGKWKDVQPFVIKNVPTFRPPPPPSTDSAEYARDFEEVR
KLGGENTERSRSERSADQTLIGTFWAYDGTAFLCAPPRLYNQVIRQIVQQQIKDGDTKDEDPKLLNYARLFALANIAMAD
AAIAAWDAKYHYRYWRPVVGIRAAATDGNDATHADVYWKALGAPASNSVRGPNFTPPFPAYPSGHATFGGALFEVLRAFY
PDDTSFSFISDEYNGQNKPAGSDVPRPEVTRRFVNFRAAEDENARSRVYLGVHWQFDADAGIAQGNQVGSFVVGSTLRCL
DDDGRALDCKPGSGFDVKRKFLISTEKRVLSTPFTPSQ
>Mature_597_residues
TIRRVFVATFILSLTPVVSTAQPVLQTQSLDDFRRILSPGLISREVTSEKVSQLNAEAAKSCFAPDAFQRAIPALPIRYK
RPLPCAPQNAFDRFVMWNQIALDTTSMDHAPPPLGTPDNPALHNYGPHRSSRVMAIVHIAMFDAINLAMRFDSKSPDKPR
YVFATYLQGIPNPKEDASVDMAITYSAGETLKALYPQQVDVIENLIAIDEGAVLSGKDRNAPMYRAGRELGITVAKAILR
ARRNDGSAHEEPQVGDPGFPLAEKSGQWRPDPVSNIAAALGGKWKDVQPFVIKNVPTFRPPPPPSTDSAEYARDFEEVRK
LGGENTERSRSERSADQTLIGTFWAYDGTAFLCAPPRLYNQVIRQIVQQQIKDGDTKDEDPKLLNYARLFALANIAMADA
AIAAWDAKYHYRYWRPVVGIRAAATDGNDATHADVYWKALGAPASNSVRGPNFTPPFPAYPSGHATFGGALFEVLRAFYP
DDTSFSFISDEYNGQNKPAGSDVPRPEVTRRFVNFRAAEDENARSRVYLGVHWQFDADAGIAQGNQVGSFVVGSTLRCLD
DDGRALDCKPGSGFDVKRKFLISTEKRVLSTPFTPSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65943; Mature: 65812

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRRVFVATFILSLTPVVSTAQPVLQTQSLDDFRRILSPGLISREVTSEKVSQLNAEAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KSCFAPDAFQRAIPALPIRYKRPLPCAPQNAFDRFVMWNQIALDTTSMDHAPPPLGTPDN
HHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC
PALHNYGPHRSSRVMAIVHIAMFDAINLAMRFDSKSPDKPRYVFATYLQGIPNPKEDASV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCE
DMAITYSAGETLKALYPQQVDVIENLIAIDEGAVLSGKDRNAPMYRAGRELGITVAKAIL
EEEEEECCCCHHHHHCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHCCHHHHHHHHHHHH
RARRNDGSAHEEPQVGDPGFPLAEKSGQWRPDPVSNIAAALGGKWKDVQPFVIKNVPTFR
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCC
PPPPPSTDSAEYARDFEEVRKLGGENTERSRSERSADQTLIGTFWAYDGTAFLCAPPRLY
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHEEEEEEECCCEEEEECCHHHH
NQVIRQIVQQQIKDGDTKDEDPKLLNYARLFALANIAMADAAIAAWDAKYHYRYWRPVVG
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
IRAAATDGNDATHADVYWKALGAPASNSVRGPNFTPPFPAYPSGHATFGGALFEVLRAFY
EEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
PDDTSFSFISDEYNGQNKPAGSDVPRPEVTRRFVNFRAAEDENARSRVYLGVHWQFDADA
CCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCC
GIAQGNQVGSFVVGSTLRCLDDDGRALDCKPGSGFDVKRKFLISTEKRVLSTPFTPSQ
CCCCCCCCCCHHHCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TIRRVFVATFILSLTPVVSTAQPVLQTQSLDDFRRILSPGLISREVTSEKVSQLNAEAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
KSCFAPDAFQRAIPALPIRYKRPLPCAPQNAFDRFVMWNQIALDTTSMDHAPPPLGTPDN
HHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC
PALHNYGPHRSSRVMAIVHIAMFDAINLAMRFDSKSPDKPRYVFATYLQGIPNPKEDASV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCCE
DMAITYSAGETLKALYPQQVDVIENLIAIDEGAVLSGKDRNAPMYRAGRELGITVAKAIL
EEEEEECCCCHHHHHCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHCCHHHHHHHHHHHH
RARRNDGSAHEEPQVGDPGFPLAEKSGQWRPDPVSNIAAALGGKWKDVQPFVIKNVPTFR
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCC
PPPPPSTDSAEYARDFEEVRKLGGENTERSRSERSADQTLIGTFWAYDGTAFLCAPPRLY
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHEEEEEEECCCEEEEECCHHHH
NQVIRQIVQQQIKDGDTKDEDPKLLNYARLFALANIAMADAAIAAWDAKYHYRYWRPVVG
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
IRAAATDGNDATHADVYWKALGAPASNSVRGPNFTPPFPAYPSGHATFGGALFEVLRAFY
EEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
PDDTSFSFISDEYNGQNKPAGSDVPRPEVTRRFVNFRAAEDENARSRVYLGVHWQFDADA
CCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCC
GIAQGNQVGSFVVGSTLRCLDDDGRALDCKPGSGFDVKRKFLISTEKRVLSTPFTPSQ
CCCCCCCCCCHHHCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA