Click here to switch to the map view.

The map label for this gene is fdxA [H]

Identifier: 86750526

GI number: 86750526

Start: 3903259

End: 3903564

Strand: Reverse

Name: fdxA [H]

Synonym: RPB_3415

Alternate gene names: 86750526

Gene position: 3903564-3903259 (Counterclockwise)

Preceding gene: 86750527

Following gene: 86750525

Centisome position: 73.21

GC content: 66.34

Gene sequence:

>306_bases
ATGACGTATGTGGTTACGGACAATTGCAAAGGCTGTCGCTACACCGAGTGCGTCACGGTCTGTCCGGTCGAGTGCTTCCA
CGTCGACGCCGCGATGACCTATATCGATCCGGAGAACTGCATCGATTGCGGCGGCTGTGCGCCGGCCTGTCCGGTCGGGG
CGATCGCGCCGGACTACCGGCTGCCGGCGCATCAGAAATTCTGGATCGACGTCAACCGCAAGCGTGCCGCTGAAACGCCG
GTGCTCACCGCGCGGCTGCCGCCGCTGCCCGGCGCCGACGACCGCAGGCAGGCGCTGGGCCGATGA

Upstream 100 bases:

>100_bases
ACATTCTCGTCCAGGTCGGCCGACTGTAGCCGGCGAGCGAACGACCGATGCTCCGGCGTCGGTCGATGTTGATCCTCATC
GATACACGGGAAGTCGAACG

Downstream 100 bases:

>100_bases
CGGCAGCGGCGCGCGACCCTGCGCCCGCGGCTGCCTTTCGGATCGCGGTGGTCGGCAGCGGACCGAGCGGGTTCTACGCG
ACGGAGGCCTTGTTCCGGTC

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: Ferredoxin II; FdII [H]

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTYVVTDNCKGCRYTECVTVCPVECFHVDAAMTYIDPENCIDCGGCAPACPVGAIAPDYRLPAHQKFWIDVNRKRAAETP
VLTARLPPLPGADDRRQALGR

Sequences:

>Translated_101_residues
MTYVVTDNCKGCRYTECVTVCPVECFHVDAAMTYIDPENCIDCGGCAPACPVGAIAPDYRLPAHQKFWIDVNRKRAAETP
VLTARLPPLPGADDRRQALGR
>Mature_100_residues
TYVVTDNCKGCRYTECVTVCPVECFHVDAAMTYIDPENCIDCGGCAPACPVGAIAPDYRLPAHQKFWIDVNRKRAAETPV
LTARLPPLPGADDRRQALGR

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813
- InterPro:   IPR022569 [H]

Pfam domain/function: PF11953 DUF3470; PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 11071; Mature: 10940

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
10.9 %Cys+Met (Translated Protein)
9.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYVVTDNCKGCRYTECVTVCPVECFHVDAAMTYIDPENCIDCGGCAPACPVGAIAPDYR
CEEEECCCCCCCCCCCEEEECCCEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
LPAHQKFWIDVNRKRAAETPVLTARLPPLPGADDRRQALGR
CCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHCCC
>Mature Secondary Structure 
TYVVTDNCKGCRYTECVTVCPVECFHVDAAMTYIDPENCIDCGGCAPACPVGAIAPDYR
EEEECCCCCCCCCCCEEEECCCEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
LPAHQKFWIDVNRKRAAETPVLTARLPPLPGADDRRQALGR
CCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2388848; 2071578; 2277040 [H]