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The map label for this gene is ygaP [C]

Identifier: 86750473

GI number: 86750473

Start: 3845203

End: 3845529

Strand: Reverse

Name: ygaP [C]

Synonym: RPB_3362

Alternate gene names: 86750473

Gene position: 3845529-3845203 (Counterclockwise)

Preceding gene: 86750474

Following gene: 86750472

Centisome position: 72.13

GC content: 67.28

Gene sequence:

>327_bases
GTGGTAGGCCAGGTTGAGGATTTGACGCCGCAGGACGTCGCCAAAGGGGTCGCAGAGGGACGTTATCTGCTGGTCGACGT
CCGCGAGCCGAACGAAGTGGCGGCGGAAGCCTATCCGGACGCGGTGGTGGTTCCGCTGTCGAGCTTCGATCCGCGCCAGA
TCCCCGATCCGAGCGGCAAGCAGGTCGTGTTCGCCTGCCGCTCGGGTAAGCGCTCGGTGACGGCCTCTCAGGCGGCGCAG
ATGTCAGGGCTCGCCTACAACAAGCATCTCGCCGGCGGCATCCTCGGATGGAAGGCGGCAGGCCTGCCGACCAAGCCGGG
CGGCTGA

Upstream 100 bases:

>100_bases
TTTCCTCGCGCTAGGCGCGACTTTGGCGACGCAATGGCCGAGCGTCGTTCTCGTTGTTGCACTATTGGGTCCAGGCAGTG
CAATTGCGGGAGAAACGAGA

Downstream 100 bases:

>100_bases
TCGCGCGATGAACAGGGTCTTCGCCGATCTGCCCGTCACCGTGTTCGAGGCGATGTCGCAGCTCGCACGCGACAACAACG
CGATCAATCTCGGCCAGGGG

Product: rhodanese-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MVGQVEDLTPQDVAKGVAEGRYLLVDVREPNEVAAEAYPDAVVVPLSSFDPRQIPDPSGKQVVFACRSGKRSVTASQAAQ
MSGLAYNKHLAGGILGWKAAGLPTKPGG

Sequences:

>Translated_108_residues
MVGQVEDLTPQDVAKGVAEGRYLLVDVREPNEVAAEAYPDAVVVPLSSFDPRQIPDPSGKQVVFACRSGKRSVTASQAAQ
MSGLAYNKHLAGGILGWKAAGLPTKPGG
>Mature_108_residues
MVGQVEDLTPQDVAKGVAEGRYLLVDVREPNEVAAEAYPDAVVVPLSSFDPRQIPDPSGKQVVFACRSGKRSVTASQAAQ
MSGLAYNKHLAGGILGWKAAGLPTKPGG

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021309
- InterPro:   IPR001763 [H]

Pfam domain/function: PF11127 DUF2892; PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 11261; Mature: 11261

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGQVEDLTPQDVAKGVAEGRYLLVDVREPNEVAAEAYPDAVVVPLSSFDPRQIPDPSGK
CCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCC
QVVFACRSGKRSVTASQAAQMSGLAYNKHLAGGILGWKAAGLPTKPGG
EEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVGQVEDLTPQDVAKGVAEGRYLLVDVREPNEVAAEAYPDAVVVPLSSFDPRQIPDPSGK
CCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCCCCC
QVVFACRSGKRSVTASQAAQMSGLAYNKHLAGGILGWKAAGLPTKPGG
EEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]