| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is ilvI [H]
Identifier: 86750456
GI number: 86750456
Start: 3825959
End: 3827737
Strand: Reverse
Name: ilvI [H]
Synonym: RPB_3345
Alternate gene names: 86750456
Gene position: 3827737-3825959 (Counterclockwise)
Preceding gene: 86750457
Following gene: 86750455
Centisome position: 71.79
GC content: 65.77
Gene sequence:
>1779_bases ATGAGCGACAGCACCAGCCACGATCCCAACCAGATGACCGGCGCCGCGATGATCGTCCGCGCGATGAAGGATCACGGCGT CGAGCACATCTTCGGCTATCCCGGCGGCGCGGTGCTTCCGATCTATGACGAGATCTTCCAGCAGTCCGACGTGCAGCACA TCCTGGTCCGGCACGAGCAGGGCGCCGGCCATGCCGCCGAGGGCTATGCGCGCTCGACCGGCAAGCCGGGCGTGGTGCTG GTGACCTCGGGCCCGGGCGCCACCAACATGGTGACGCCGCTGGCCGACGCGCTGATGGATTCGATCCCGATCGTCTGCAT CACCGGGCAGGTGCCGACGCATCTGATCGGCAATGACGCGTTCCAGGAATGCGACACCGTCGGCATCACCCGGCCTTGCA CCAAGCACAATTGGTTGGTGCGCGACATCAAGGATCTCGCCCGCGTGCTGCACGAGGCGTTCTACGTCGCGACCTCCGGC CGTCCGGGCCCGGTCGTGGTCGACGTGCCGAAGGACGTGCAGTTCGCCACCGGCACCTATCATCCGCCGCGCAAGGACGA CGTCCACGTCTCCTACAAGCCGGTCACCAAGGGCGATCCGAACCAGATCCGCAAGGCGGTGGCGATGCTCGCCGGCGCCA AGCGGCCGGTGATCTATTCCGGCGGCGGCGTGGTCAATTCCGGCGACGAAGCCTGCCGGCTGCTGCGCGAGCTGGTCGAG GTCACCGATTTCCCGATCACCTCGACGCTGATGGGGCTCGGCGCCTATCCGGCGTCGGGCAAGAACTGGCTCGGCATGCT CGGCATGCACGGCACCTACGAAGCCAACATGACGATGCATGGCTGCGACGTCATGCTGTGCATCGGCGCGCGCTTCGACG ACCGCATCACCGGCCGCACCGACGCGTTCGCGCCGCACGCCAAGAAGATCCACATCGACATCGACCCGTCGTCGATCAAC AAGAACATCCGCGTCGACGTGCCGATCATCGGCGACGTCGCCAGCGTGCTGACCGATCTGCTCGCGGTGTTCAAGGCCGA GGCGAAGAAGCCCGACATCAAGCCGTGGTGGCACCAGGTCGCGACCTGGCGCGCGCGCAATTCGCTGGCCTACAAGAAGA ACAACGACCTGATCATGCCGCAATACGCGATCCAGCGGCTTTACGAGGCGACGCGTGGCCGCGACACCTACATCACCACC GAAGTCGGCCAGCATCAGATGTGGGCGGCGCAGTTCTACGGCTTCGAACAGCCGAAGCGCTGGATGACCTCGGGCGGCCT CGGCACCATGGGCTACGGCCTGCCGGCGGCGCTCGGCGTCCAGGTGGCGCATCGCGATGCGCTGGTGATCGACATCGCCG GCGACGCCTCGGTGCAGATGACGATGCAGGAGATGGCGACGGCGGTGCAGTACGAACTGCCGATCAAGATCTTCATCCTC AACAACCAGTATATGGGGATGGTGCGGCAGTGGCAGCAGCTGTTGCATGGTAATCGGCTGTCGCACTCCTACACCGAGGC GATGCCGGACTTCGTCAAGCTCGCCGAGGCCTATGGCGGCGTCGGCATGCAGGTGACCAAGCCGGCCGATCTCGACGGCG CGATCATGGACATGATCAAGGTCAACAAGCCGGTGCTGTTCGACTGCCGCGTCGCCGCGCTGGAGAACTGCTTCCCGATG ATCCCGTCCGGCAAGGCCCACAACGAGATGCTGCTGCCGGCCGAAGCCACCGACGAAGCCACCGCGGCGGCCTTCGCCGG CGGCAAGGCGCTGGTGTGA
Upstream 100 bases:
>100_bases GGCCTTGAACGGGCCCTTTTTTATTGTCCGAACGCCTTCGACCCGAACTTTGTCCGAACCACCCGAACTTCAGCGCCAGA CGGCGCCTCCGGAGCCCACC
Downstream 100 bases:
>100_bases GCCACTGACGCGCTGCGCTGATTACCTCTCCCCGCGTGCGGGGAGAGGTCGACCCGGCGGAGCGTAGCGAAGCCGGGGCG GGTGAGGGGGCGCCTCCGCG
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS-III; ALS-III; Acetohydroxy-acid synthase III large subunit [H]
Number of amino acids: Translated: 592; Mature: 591
Protein sequence:
>592_residues MSDSTSHDPNQMTGAAMIVRAMKDHGVEHIFGYPGGAVLPIYDEIFQQSDVQHILVRHEQGAGHAAEGYARSTGKPGVVL VTSGPGATNMVTPLADALMDSIPIVCITGQVPTHLIGNDAFQECDTVGITRPCTKHNWLVRDIKDLARVLHEAFYVATSG RPGPVVVDVPKDVQFATGTYHPPRKDDVHVSYKPVTKGDPNQIRKAVAMLAGAKRPVIYSGGGVVNSGDEACRLLRELVE VTDFPITSTLMGLGAYPASGKNWLGMLGMHGTYEANMTMHGCDVMLCIGARFDDRITGRTDAFAPHAKKIHIDIDPSSIN KNIRVDVPIIGDVASVLTDLLAVFKAEAKKPDIKPWWHQVATWRARNSLAYKKNNDLIMPQYAIQRLYEATRGRDTYITT EVGQHQMWAAQFYGFEQPKRWMTSGGLGTMGYGLPAALGVQVAHRDALVIDIAGDASVQMTMQEMATAVQYELPIKIFIL NNQYMGMVRQWQQLLHGNRLSHSYTEAMPDFVKLAEAYGGVGMQVTKPADLDGAIMDMIKVNKPVLFDCRVAALENCFPM IPSGKAHNEMLLPAEATDEATAAAFAGGKALV
Sequences:
>Translated_592_residues MSDSTSHDPNQMTGAAMIVRAMKDHGVEHIFGYPGGAVLPIYDEIFQQSDVQHILVRHEQGAGHAAEGYARSTGKPGVVL VTSGPGATNMVTPLADALMDSIPIVCITGQVPTHLIGNDAFQECDTVGITRPCTKHNWLVRDIKDLARVLHEAFYVATSG RPGPVVVDVPKDVQFATGTYHPPRKDDVHVSYKPVTKGDPNQIRKAVAMLAGAKRPVIYSGGGVVNSGDEACRLLRELVE VTDFPITSTLMGLGAYPASGKNWLGMLGMHGTYEANMTMHGCDVMLCIGARFDDRITGRTDAFAPHAKKIHIDIDPSSIN KNIRVDVPIIGDVASVLTDLLAVFKAEAKKPDIKPWWHQVATWRARNSLAYKKNNDLIMPQYAIQRLYEATRGRDTYITT EVGQHQMWAAQFYGFEQPKRWMTSGGLGTMGYGLPAALGVQVAHRDALVIDIAGDASVQMTMQEMATAVQYELPIKIFIL NNQYMGMVRQWQQLLHGNRLSHSYTEAMPDFVKLAEAYGGVGMQVTKPADLDGAIMDMIKVNKPVLFDCRVAALENCFPM IPSGKAHNEMLLPAEATDEATAAAFAGGKALV >Mature_591_residues SDSTSHDPNQMTGAAMIVRAMKDHGVEHIFGYPGGAVLPIYDEIFQQSDVQHILVRHEQGAGHAAEGYARSTGKPGVVLV TSGPGATNMVTPLADALMDSIPIVCITGQVPTHLIGNDAFQECDTVGITRPCTKHNWLVRDIKDLARVLHEAFYVATSGR PGPVVVDVPKDVQFATGTYHPPRKDDVHVSYKPVTKGDPNQIRKAVAMLAGAKRPVIYSGGGVVNSGDEACRLLRELVEV TDFPITSTLMGLGAYPASGKNWLGMLGMHGTYEANMTMHGCDVMLCIGARFDDRITGRTDAFAPHAKKIHIDIDPSSINK NIRVDVPIIGDVASVLTDLLAVFKAEAKKPDIKPWWHQVATWRARNSLAYKKNNDLIMPQYAIQRLYEATRGRDTYITTE VGQHQMWAAQFYGFEQPKRWMTSGGLGTMGYGLPAALGVQVAHRDALVIDIAGDASVQMTMQEMATAVQYELPIKIFILN NQYMGMVRQWQQLLHGNRLSHSYTEAMPDFVKLAEAYGGVGMQVTKPADLDGAIMDMIKVNKPVLFDCRVAALENCFPMI PSGKAHNEMLLPAEATDEATAAAFAGGKALV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=568, Percent_Identity=25.7042253521127, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI21361361, Length=552, Percent_Identity=24.6376811594203, Blast_Score=144, Evalue=2e-34, Organism=Escherichia coli, GI87081685, Length=568, Percent_Identity=50, Blast_Score=593, Evalue=1e-171, Organism=Escherichia coli, GI1790104, Length=571, Percent_Identity=42.5569176882662, Blast_Score=461, Evalue=1e-131, Organism=Escherichia coli, GI1786717, Length=534, Percent_Identity=37.2659176029963, Blast_Score=316, Evalue=2e-87, Organism=Escherichia coli, GI1787096, Length=556, Percent_Identity=27.3381294964029, Blast_Score=192, Evalue=7e-50, Organism=Escherichia coli, GI1788716, Length=561, Percent_Identity=28.1639928698752, Blast_Score=169, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17531301, Length=571, Percent_Identity=25.569176882662, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17531299, Length=571, Percent_Identity=25.569176882662, Blast_Score=159, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17542570, Length=520, Percent_Identity=26.1538461538462, Blast_Score=122, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6323755, Length=580, Percent_Identity=44.1379310344828, Blast_Score=486, Evalue=1e-138, Organism=Saccharomyces cerevisiae, GI6320816, Length=491, Percent_Identity=24.847250509165, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI19922626, Length=481, Percent_Identity=26.8191268191268, Blast_Score=165, Evalue=7e-41,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 64495; Mature: 64364
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSTSHDPNQMTGAAMIVRAMKDHGVEHIFGYPGGAVLPIYDEIFQQSDVQHILVRHEQ CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEEHHHHHHHCCCCHHEEEEEECC GAGHAAEGYARSTGKPGVVLVTSGPGATNMVTPLADALMDSIPIVCITGQVPTHLIGNDA CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHCCCHH FQECDTVGITRPCTKHNWLVRDIKDLARVLHEAFYVATSGRPGPVVVDVPKDVQFATGTY HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCCEECCCCC HPPRKDDVHVSYKPVTKGDPNQIRKAVAMLAGAKRPVIYSGGGVVNSGDEACRLLRELVE CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHH VTDFPITSTLMGLGAYPASGKNWLGMLGMHGTYEANMTMHGCDVMLCIGARFDDRITGRT HCCCCHHHHHHHCCCCCCCCCCCEEEECCCCEEECCEEEECCCEEEEECCCCCCCCCCCC DAFAPHAKKIHIDIDPSSINKNIRVDVPIIGDVASVLTDLLAVFKAEAKKPDIKPWWHQV CCCCCCCEEEEEEECHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH ATWRARNSLAYKKNNDLIMPQYAIQRLYEATRGRDTYITTEVGQHQMWAAQFYGFEQPKR HHHHHHCCEEEECCCCEECHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCHH WMTSGGLGTMGYGLPAALGVQVAHRDALVIDIAGDASVQMTMQEMATAVQYELPIKIFIL HHHCCCCCCCCCCCHHHHHEEEECCCEEEEEECCCCCHHHHHHHHHHHHEEECCEEEEEE NNQYMGMVRQWQQLLHGNRLSHSYTEAMPDFVKLAEAYGGVGMQVTKPADLDGAIMDMIK CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH VNKPVLFDCRVAALENCFPMIPSGKAHNEMLLPAEATDEATAAAFAGGKALV CCCCEEEEHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure SDSTSHDPNQMTGAAMIVRAMKDHGVEHIFGYPGGAVLPIYDEIFQQSDVQHILVRHEQ CCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEEHHHHHHHCCCCHHEEEEEECC GAGHAAEGYARSTGKPGVVLVTSGPGATNMVTPLADALMDSIPIVCITGQVPTHLIGNDA CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHCCCHH FQECDTVGITRPCTKHNWLVRDIKDLARVLHEAFYVATSGRPGPVVVDVPKDVQFATGTY HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCCEECCCCC HPPRKDDVHVSYKPVTKGDPNQIRKAVAMLAGAKRPVIYSGGGVVNSGDEACRLLRELVE CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHH VTDFPITSTLMGLGAYPASGKNWLGMLGMHGTYEANMTMHGCDVMLCIGARFDDRITGRT HCCCCHHHHHHHCCCCCCCCCCCEEEECCCCEEECCEEEECCCEEEEECCCCCCCCCCCC DAFAPHAKKIHIDIDPSSINKNIRVDVPIIGDVASVLTDLLAVFKAEAKKPDIKPWWHQV CCCCCCCEEEEEEECHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH ATWRARNSLAYKKNNDLIMPQYAIQRLYEATRGRDTYITTEVGQHQMWAAQFYGFEQPKR HHHHHHCCEEEECCCCEECHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCHH WMTSGGLGTMGYGLPAALGVQVAHRDALVIDIAGDASVQMTMQEMATAVQYELPIKIFIL HHHCCCCCCCCCCCHHHHHEEEECCCEEEEEECCCCCHHHHHHHHHHHHEEECCEEEEEE NNQYMGMVRQWQQLLHGNRLSHSYTEAMPDFVKLAEAYGGVGMQVTKPADLDGAIMDMIK CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH VNKPVLFDCRVAALENCFPMIPSGKAHNEMLLPAEATDEATAAAFAGGKALV CCCCEEEEHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6308579; 1630901; 9278503; 3891724; 9298646 [H]