| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750443
Identifier: 86750443
GI number: 86750443
Start: 3812813
End: 3813529
Strand: Reverse
Name: 86750443
Synonym: RPB_3332
Alternate gene names: NA
Gene position: 3813529-3812813 (Counterclockwise)
Preceding gene: 86750444
Following gene: 86750441
Centisome position: 71.53
GC content: 67.09
Gene sequence:
>717_bases ATGAGCGCGTCCGCGCCGGTCACGATCCATCGTGTGACGCAACTCGACCTGTGGGTCGACGACCATGTGTGGCCGTTCGC ACAAACGCACCGGACGAAGATCGATGGCTATTTCGCGGCGCGGCAGCTCGAGCAGCCGAAGCTGTGGAACGGCCGCGTGC TGATGGGGCGTCGACCGCGCTTCGAAGGCGGCCGCTTCAGCGCCGACTATTTCGAGACCGACTTCGCCAGCTTCCTGTGC TGGCGCGAATGGGAGTTTCCCGATCTGTCGGTGTTCAACGGCTTCGGGATGGGGGTGATCCGCTCGAGCGACGGCGCCAT CGTGCTCGGCGAGATGGGCGCCCACACCGCCAATGCCGGCAAGGTGTATTTCGCCGGCGGCACGCCCGACCCGTCCGATG TCCGCGGCAAGCGTCTCGATATTCCCGCCAGCGTCGCGCGCGAGGTCGAGGAGGAGACCGGGCTGCGGCGCTCGGATTAT CGCGCGGCCGATCATTGGCACTGCGTCGAGGCCGGCCCCTACGTCGCGATGCTGCGCCTGCTGGATGTCTATCTGCCGGC CGAGGCGCTGCAGGGCCGGATCGAGGCGCATCTGGCGCGCGACGCGTTGCCGGAGTTCAGCCGGGTGCATCTGGTGCGGT CGGAGGCGGATTTTCTGCCGACGATGCCGCGCTTCGTCACCGCCTATCTCACCATGCTGCTCGACGGCGAGGATTGA
Upstream 100 bases:
>100_bases GATGTGGCGAAAGCCAATATCGACGTCACCAGGACCTACACCAACGCCTTCGTCGAGCAGGCGGCGAAGACGTCGGGCGC GGCGAAGTAGCGGCGTCCCC
Downstream 100 bases:
>100_bases GCAAAACTCTCCGTCATTGCGAGCGAAGCGAAGCAATCCAGAGGCACAGTGCTCGGCGCTGGATTGCTTCGTCGCTGCGC TCCTCGCAATGACGGGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; NTP Pyrophosphohydrolase Protein MuT/Nudix Family; NUDIX Hydrolase Family Protein; Nudix Hydrolase; NTP Pyrophosphohydrolase Protein
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSASAPVTIHRVTQLDLWVDDHVWPFAQTHRTKIDGYFAARQLEQPKLWNGRVLMGRRPRFEGGRFSADYFETDFASFLC WREWEFPDLSVFNGFGMGVIRSSDGAIVLGEMGAHTANAGKVYFAGGTPDPSDVRGKRLDIPASVAREVEEETGLRRSDY RAADHWHCVEAGPYVAMLRLLDVYLPAEALQGRIEAHLARDALPEFSRVHLVRSEADFLPTMPRFVTAYLTMLLDGED
Sequences:
>Translated_238_residues MSASAPVTIHRVTQLDLWVDDHVWPFAQTHRTKIDGYFAARQLEQPKLWNGRVLMGRRPRFEGGRFSADYFETDFASFLC WREWEFPDLSVFNGFGMGVIRSSDGAIVLGEMGAHTANAGKVYFAGGTPDPSDVRGKRLDIPASVAREVEEETGLRRSDY RAADHWHCVEAGPYVAMLRLLDVYLPAEALQGRIEAHLARDALPEFSRVHLVRSEADFLPTMPRFVTAYLTMLLDGED >Mature_237_residues SASAPVTIHRVTQLDLWVDDHVWPFAQTHRTKIDGYFAARQLEQPKLWNGRVLMGRRPRFEGGRFSADYFETDFASFLCW REWEFPDLSVFNGFGMGVIRSSDGAIVLGEMGAHTANAGKVYFAGGTPDPSDVRGKRLDIPASVAREVEEETGLRRSDYR AADHWHCVEAGPYVAMLRLLDVYLPAEALQGRIEAHLARDALPEFSRVHLVRSEADFLPTMPRFVTAYLTMLLDGED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26863; Mature: 26731
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASAPVTIHRVTQLDLWVDDHVWPFAQTHRTKIDGYFAARQLEQPKLWNGRVLMGRRPR CCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHCHHHHHHHCCCCCCCCCEEEECCCCC FEGGRFSADYFETDFASFLCWREWEFPDLSVFNGFGMGVIRSSDGAIVLGEMGAHTANAG CCCCCEECHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCCC KVYFAGGTPDPSDVRGKRLDIPASVAREVEEETGLRRSDYRAADHWHCVEAGPYVAMLRL EEEEECCCCCHHHCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHH LDVYLPAEALQGRIEAHLARDALPEFSRVHLVRSEADFLPTMPRFVTAYLTMLLDGED HHHHCCHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SASAPVTIHRVTQLDLWVDDHVWPFAQTHRTKIDGYFAARQLEQPKLWNGRVLMGRRPR CCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHCHHHHHHHCCCCCCCCCEEEECCCCC FEGGRFSADYFETDFASFLCWREWEFPDLSVFNGFGMGVIRSSDGAIVLGEMGAHTANAG CCCCCEECHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCCEEEEECCCCCCCCCC KVYFAGGTPDPSDVRGKRLDIPASVAREVEEETGLRRSDYRAADHWHCVEAGPYVAMLRL EEEEECCCCCHHHCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHH LDVYLPAEALQGRIEAHLARDALPEFSRVHLVRSEADFLPTMPRFVTAYLTMLLDGED HHHHCCHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA