Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86750395

Identifier: 86750395

GI number: 86750395

Start: 3756781

End: 3757374

Strand: Reverse

Name: 86750395

Synonym: RPB_3284

Alternate gene names: NA

Gene position: 3757374-3756781 (Counterclockwise)

Preceding gene: 86750397

Following gene: 86750391

Centisome position: 70.47

GC content: 67.34

Gene sequence:

>594_bases
ATGGCGATGCAACGCGAAGCCGGCTTGACGCAGACGCCGCGTCGGCGATACGACGCCGGCGTGATCATCGTCAGCGCCCT
CAGCCATGCTCAGGATCTCGTCGCGCGGCTGCGGCCGGCGCGGTCGCTGTCCTTGATGGCGCCGTGGCAGCGAGTCGTCT
TCAACGAGGCCTGGCTGCCCGAACAACGGCTGATCCTCGCTTTCAACGACGTCGTCGAGACCGGCTCCGTCCATGTCGCG
CCGGATGATGCGATCGTGCGCAGCATCATCGAATTCGCGCACGGCTGTGAAAGCGGTCAGGACGTTCTGGTGCATTGCTG
GATGGGCGTCAGCCGCTCGCCGGCCGCGGCCTATATCATCGCCTGCGCGCGCGCGCCGGGCGACGAGCACGCGATCGCCG
AGGAATTGCGCCGCTGTTCGCCGGTGGCGACGCCGAACCGGCTGATGGTGGCGATTGCGGATGACATTCTCGCGCGCAAC
GGTCGCATGGTCGAGGCGATCGAGCACATCGGGCGGGGAGTCGAGTATGACGGCGACGCCGCGCCGTTCTGCTTGCGGCT
CGACTGGCGCGATGGTCCGGCGCATCAGATCTGA

Upstream 100 bases:

>100_bases
GTCGCGCGCGGCGTGAAATGGATGCGGGAGATCAACTCATCGACGTCGGGTGTGGTCATCGGGAAACTCGATAGGAGGGG
AAGCAGGAGCGGGCGGACGA

Downstream 100 bases:

>100_bases
CTCCCGCCTGCAATCGCCGCGACGCCGAGCAACAGTCCGATCTGGGCGAGTTGTTCGGTCGCGCCGAGTACGTCGCCGAC
ATAGCCGCCGAGCAGACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MAMQREAGLTQTPRRRYDAGVIIVSALSHAQDLVARLRPARSLSLMAPWQRVVFNEAWLPEQRLILAFNDVVETGSVHVA
PDDAIVRSIIEFAHGCESGQDVLVHCWMGVSRSPAAAYIIACARAPGDEHAIAEELRRCSPVATPNRLMVAIADDILARN
GRMVEAIEHIGRGVEYDGDAAPFCLRLDWRDGPAHQI

Sequences:

>Translated_197_residues
MAMQREAGLTQTPRRRYDAGVIIVSALSHAQDLVARLRPARSLSLMAPWQRVVFNEAWLPEQRLILAFNDVVETGSVHVA
PDDAIVRSIIEFAHGCESGQDVLVHCWMGVSRSPAAAYIIACARAPGDEHAIAEELRRCSPVATPNRLMVAIADDILARN
GRMVEAIEHIGRGVEYDGDAAPFCLRLDWRDGPAHQI
>Mature_196_residues
AMQREAGLTQTPRRRYDAGVIIVSALSHAQDLVARLRPARSLSLMAPWQRVVFNEAWLPEQRLILAFNDVVETGSVHVAP
DDAIVRSIIEFAHGCESGQDVLVHCWMGVSRSPAAAYIIACARAPGDEHAIAEELRRCSPVATPNRLMVAIADDILARNG
RMVEAIEHIGRGVEYDGDAAPFCLRLDWRDGPAHQI

Specific function: Unknown

COG id: COG5350

COG function: function code R; Predicted protein tyrosine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21683; Mature: 21552

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMQREAGLTQTPRRRYDAGVIIVSALSHAQDLVARLRPARSLSLMAPWQRVVFNEAWLP
CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHCCCCCC
EQRLILAFNDVVETGSVHVAPDDAIVRSIIEFAHGCESGQDVLVHCWMGVSRSPAAAYII
CCCEEEEEHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCEEHHEECCCCCCCCCEEEE
ACARAPGDEHAIAEELRRCSPVATPNRLMVAIADDILARNGRMVEAIEHIGRGVEYDGDA
EEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHCCCCCCCCCC
APFCLRLDWRDGPAHQI
CCEEEEEECCCCCCCCC
>Mature Secondary Structure 
AMQREAGLTQTPRRRYDAGVIIVSALSHAQDLVARLRPARSLSLMAPWQRVVFNEAWLP
CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHCCCCCC
EQRLILAFNDVVETGSVHVAPDDAIVRSIIEFAHGCESGQDVLVHCWMGVSRSPAAAYII
CCCEEEEEHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCEEHHEECCCCCCCCCEEEE
ACARAPGDEHAIAEELRRCSPVATPNRLMVAIADDILARNGRMVEAIEHIGRGVEYDGDA
EEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHCCCCCCCCCC
APFCLRLDWRDGPAHQI
CCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA