| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is livK [C]
Identifier: 86750376
GI number: 86750376
Start: 3735046
End: 3736269
Strand: Reverse
Name: livK [C]
Synonym: RPB_3265
Alternate gene names: 86750376
Gene position: 3736269-3735046 (Counterclockwise)
Preceding gene: 86750377
Following gene: 86750375
Centisome position: 70.08
GC content: 62.99
Gene sequence:
>1224_bases ATGACGTCGCTCAGTCGTCGTTCGCTGATGCTTCGATCGGCCGCAGCCGGTCTCGCCGCGCTGACAAGCGCACGAAACGC CCGCGCCGACGATTGGCCGGGCGTCACCGCGACCGAGCTCAAGATCGGATGCACGACCTCGCTGAGCGGCCCGGTGTCCG CCTTGGGCACCATCGCGCGCAGCCAGGAAGCCTATTTCCGGATGCTGAACGATCAGGGCGGCATCGCCGGCCGCAAGATC AACTTCATCATGTACGACGACGCGTTCAATCCCTCCAAGACGGTCGAGCAGACCCGGCGGCTGATCGAGAGCGACAATGT CGCGTTCCTGTTTTCGATGCTCGGCACCGCGCCGAATTCGGCCGTGGTGAAATACATCAATGCCCAGAAGGTCCCGCATC TGTTCCTGTCGGTGAACGGCGACAAATGGGGCGACTACAAGACCTATCCGTGGACGATGGGATTCGCGCCGAGTTCCCGG ACCGAAGCCCAGGTGTTCGCCAAATACGCGCTCAGCCAGAAGCCGGATGCGAAGTTCGCGCTGCTGTATCAGAACGACGA CCTCGGCAAGGATTTCGTCGCCGGCCTGCGCGACGTGCTGGGCGATCGCTACGACACGCTCGTGAAGGCATTGTCCTACG AGGTCACCGAGCCGACGATCGACTCGCAGATCGTCACGCTGCGGGCGACCAATGCCGACGTGCTGATCTCGGGCGTCACG TCGAAATTCGCCGCGCAGGCGATCCGCAAGGTCTACGAGTTGGGCTGGAAGCCGATGCACTTCGTCACCAGCGGCGCGGC CTCCGTGGCGTCGACGATCATCCCGGTGGGCGCCGAGCGCGCCGAAGGCCTGATCACGTCGACCTATACCAAGGATCCGG CCGACCCGGCATGGGCCGACGATCCCGGCATCAAGGACTACATGGCGTTCATGGCGAAATACTTCCCGACCGGAAACGCC AAGGAAAGCCTCAATGCCTATGGCTACACCGCCGCGTCGGTGCTGCGCGTCCTGCTCGAACAGTGCAAAGGCAATTTCAG CCGCGAGAGCATCATGGCGCAGGCCAACAACCTCAAGAACGTCGAGGTGCCCACGTTGTTGCCGGGCGTTCGGGTCAACA CCAGCCCGACCAATCATCATCCGCTGCGGCAGATGCAGCTGCAGCGCTTTGAAGGGCAGGGCTACAAGCGCTTTGGCGCG GTCATCGAGGGGACGATGCTGTAG
Upstream 100 bases:
>100_bases GTATGGACGCAAGATAGCGTGCGCGACTGTCCCCTACGCTGCTACCTGATAACTGCGCGCAAGACGCAGACAGTTCCAGC ACAACAGAGGGAGGGGAGCC
Downstream 100 bases:
>100_bases GCGCGGCCACCATGGCGCAGCCGGAAGCTCGCAAGATGCTCGCGAGCGGCTGCGTTATGGGGTAGCCTGCCGACCGCCGT TCCGATCGACCGGACGTCGA
Product: twin-arginine translocation pathway signal
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTSLSRRSLMLRSAAAGLAALTSARNARADDWPGVTATELKIGCTTSLSGPVSALGTIARSQEAYFRMLNDQGGIAGRKI NFIMYDDAFNPSKTVEQTRRLIESDNVAFLFSMLGTAPNSAVVKYINAQKVPHLFLSVNGDKWGDYKTYPWTMGFAPSSR TEAQVFAKYALSQKPDAKFALLYQNDDLGKDFVAGLRDVLGDRYDTLVKALSYEVTEPTIDSQIVTLRATNADVLISGVT SKFAAQAIRKVYELGWKPMHFVTSGAASVASTIIPVGAERAEGLITSTYTKDPADPAWADDPGIKDYMAFMAKYFPTGNA KESLNAYGYTAASVLRVLLEQCKGNFSRESIMAQANNLKNVEVPTLLPGVRVNTSPTNHHPLRQMQLQRFEGQGYKRFGA VIEGTML
Sequences:
>Translated_407_residues MTSLSRRSLMLRSAAAGLAALTSARNARADDWPGVTATELKIGCTTSLSGPVSALGTIARSQEAYFRMLNDQGGIAGRKI NFIMYDDAFNPSKTVEQTRRLIESDNVAFLFSMLGTAPNSAVVKYINAQKVPHLFLSVNGDKWGDYKTYPWTMGFAPSSR TEAQVFAKYALSQKPDAKFALLYQNDDLGKDFVAGLRDVLGDRYDTLVKALSYEVTEPTIDSQIVTLRATNADVLISGVT SKFAAQAIRKVYELGWKPMHFVTSGAASVASTIIPVGAERAEGLITSTYTKDPADPAWADDPGIKDYMAFMAKYFPTGNA KESLNAYGYTAASVLRVLLEQCKGNFSRESIMAQANNLKNVEVPTLLPGVRVNTSPTNHHPLRQMQLQRFEGQGYKRFGA VIEGTML >Mature_406_residues TSLSRRSLMLRSAAAGLAALTSARNARADDWPGVTATELKIGCTTSLSGPVSALGTIARSQEAYFRMLNDQGGIAGRKIN FIMYDDAFNPSKTVEQTRRLIESDNVAFLFSMLGTAPNSAVVKYINAQKVPHLFLSVNGDKWGDYKTYPWTMGFAPSSRT EAQVFAKYALSQKPDAKFALLYQNDDLGKDFVAGLRDVLGDRYDTLVKALSYEVTEPTIDSQIVTLRATNADVLISGVTS KFAAQAIRKVYELGWKPMHFVTSGAASVASTIIPVGAERAEGLITSTYTKDPADPAWADDPGIKDYMAFMAKYFPTGNAK ESLNAYGYTAASVLRVLLEQCKGNFSRESIMAQANNLKNVEVPTLLPGVRVNTSPTNHHPLRQMQLQRFEGQGYKRFGAV IEGTML
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 44452; Mature: 44321
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLSRRSLMLRSAAAGLAALTSARNARADDWPGVTATELKIGCTTSLSGPVSALGTIAR CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHH SQEAYFRMLNDQGGIAGRKINFIMYDDAFNPSKTVEQTRRLIESDNVAFLFSMLGTAPNS HHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCH AVVKYINAQKVPHLFLSVNGDKWGDYKTYPWTMGFAPSSRTEAQVFAKYALSQKPDAKFA HHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEE LLYQNDDLGKDFVAGLRDVLGDRYDTLVKALSYEVTEPTIDSQIVTLRATNADVLISGVT EEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECHH SKFAAQAIRKVYELGWKPMHFVTSGAASVASTIIPVGAERAEGLITSTYTKDPADPAWAD HHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHCCCCHHHCCCEEECCCCCCCCCCCCC DPGIKDYMAFMAKYFPTGNAKESLNAYGYTAASVLRVLLEQCKGNFSRESIMAQANNLKN CCCHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC VEVPTLLPGVRVNTSPTNHHPLRQMQLQRFEGQGYKRFGAVIEGTML CCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCC >Mature Secondary Structure TSLSRRSLMLRSAAAGLAALTSARNARADDWPGVTATELKIGCTTSLSGPVSALGTIAR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHH SQEAYFRMLNDQGGIAGRKINFIMYDDAFNPSKTVEQTRRLIESDNVAFLFSMLGTAPNS HHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCH AVVKYINAQKVPHLFLSVNGDKWGDYKTYPWTMGFAPSSRTEAQVFAKYALSQKPDAKFA HHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEE LLYQNDDLGKDFVAGLRDVLGDRYDTLVKALSYEVTEPTIDSQIVTLRATNADVLISGVT EEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECHH SKFAAQAIRKVYELGWKPMHFVTSGAASVASTIIPVGAERAEGLITSTYTKDPADPAWAD HHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHCCCCHHHCCCEEECCCCCCCCCCCCC DPGIKDYMAFMAKYFPTGNAKESLNAYGYTAASVLRVLLEQCKGNFSRESIMAQANNLKN CCCHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC VEVPTLLPGVRVNTSPTNHHPLRQMQLQRFEGQGYKRFGAVIEGTML CCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA