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The map label for this gene is ybdA [C]

Identifier: 86750339

GI number: 86750339

Start: 3688621

End: 3689838

Strand: Reverse

Name: ybdA [C]

Synonym: RPB_3228

Alternate gene names: 86750339

Gene position: 3689838-3688621 (Counterclockwise)

Preceding gene: 86750341

Following gene: 86750338

Centisome position: 69.21

GC content: 68.14

Gene sequence:

>1218_bases
ATGACCACGCTCGCCGCTTCCGGCTCGCTGCTGCGGCACCGCGCCTTTGCGATCTATCTCGGCGCACGGACGTCCTCCCG
CTTCGCCAGCCAGATTGCGGCGGTGGCGGTGGGCTGGCAGGTCTACGACATGACCTCGAGCGCGTTCGCGCTCGGCATGA
TCGGACTGGTGCAGTTCATCCCGACCGCGCTGCTGGTGTTCGTCGCCGGCCACGCCGTCGACCGGTTCGACCGCAAGCGG
GTGGTGCAGCTGTGCCAGATCGTGGAAGGGCTGACCGCGGTGTTCCTCGCCGTCGGCACCTATGGCGGCTGGCTGACGGT
GCCGCAGATCTTCGTCGCGATGACGCTGGTCGGCATTGCCACCTCGTTCGAGAGCCCGGCCGTGGCGGCGCTGCTGCCGT
CGGTGGTGCCGGACGGCACGCTGCAGCGGGCGACCGCGACCTCGACCGGGTTCGCGCAGCTCGCAATGATCACCGGGCCG
GCGCTCGGCGGCTTTGCTTATGCGTTCGCGCCGGGGCTGCCTTATGTGATGATGGCGGGGTTCTGGATCGCGGGCAGCGT
GCTGATGCCGCTGGTCGTGGTGGCGCGGCCGGTGCCTACGGAGCCCTCGACCGAGATTGACGATTTGTATTCGGGGTTGC
GCTTCGTCCGCTCCAATCCGGCGATTCTCGGCACGATCTCGCTCGATCTGTTCGCGGTGCTGCTCGGCGGCGCCACCGCA
TTGCTGCCGATCTATGCGCGCGATATCCTACACACCGGCCCGTGGGGGCTCGGCCTGCTGCGCGCCGCGCCGGCGATCGG
GGCGCTGGCGATGACCATCTTCCTGGCGCGCCATGCCATCACCAGCCGGGTCGGGCTGCGGATGTTCCAGGCCGTGATCG
TTTTCGGCGTGGCGACCATCGTGTTCGCTCTGTCATGGTGGCTGTGGCTGTCGGTCGCGGCGCTGGTGATCATGGGTGCG
GCGGATACTGTCAGCGTCGTGATCCGGTTCTCGCTGGTGCAACTGTCGACGCCCGACAATATGCGCGGCCGGGTCGGTGC
GGTGAACTTCCTGTTCATCAACGCTTCCAACCAGCTCGGCCAGTTCGAGAGCGGCGTCACCGCGGCGCTGTTCGGCGCGA
TGCCGGCGGCGGTGCTGGGCGGCGTCGGCACCGTTCTGGTCGCGCTGCTGTGGATGAAGCTGTTTCCGACGCTGCGCAAG
GTCGAGCGGCTGGAGTAG

Upstream 100 bases:

>100_bases
CAGGCGTGCCGGCGATCGACTTGACGCTCGCCGCACCGCGGGCCATGGCATTGGCGATGATCCCACCGTCGCTTCGCGCC
CCCGCCCGGTGCGCGCCCGT

Downstream 100 bases:

>100_bases
GGCGCGCATCGCGGCACTGTCATCCGGGCTGTGCTAGAGAAGCCGTCGCGCCGGCGGGGCGCGGCGGGACGGCAGCGGAT
GACGGACGATCGAATCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; MFS Permease; DrugProton Antiporter; Transporter Facilitator Family; Transmembrane Protein; Facilitator Superfamily Transporter; Permease Of Facilitator Superfamily; Membrane Transporter; Siderophore Export Protein; MFS Family Transporter; Permeases Of Facilitator Superfamily; Permease; Facilitator Superfamily; Facilitator MFS1 Protein; Integral Membrane Efflux Protein; Permease Facilitator Superfamily; MFS Family Permease; Macrolide-Efflux Protein; Facilitator Superfamily Transporter Permease; Permease Protein; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Multidrug ABC Transporter; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Integral Membrane Protein; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTTLAASGSLLRHRAFAIYLGARTSSRFASQIAAVAVGWQVYDMTSSAFALGMIGLVQFIPTALLVFVAGHAVDRFDRKR
VVQLCQIVEGLTAVFLAVGTYGGWLTVPQIFVAMTLVGIATSFESPAVAALLPSVVPDGTLQRATATSTGFAQLAMITGP
ALGGFAYAFAPGLPYVMMAGFWIAGSVLMPLVVVARPVPTEPSTEIDDLYSGLRFVRSNPAILGTISLDLFAVLLGGATA
LLPIYARDILHTGPWGLGLLRAAPAIGALAMTIFLARHAITSRVGLRMFQAVIVFGVATIVFALSWWLWLSVAALVIMGA
ADTVSVVIRFSLVQLSTPDNMRGRVGAVNFLFINASNQLGQFESGVTAALFGAMPAAVLGGVGTVLVALLWMKLFPTLRK
VERLE

Sequences:

>Translated_405_residues
MTTLAASGSLLRHRAFAIYLGARTSSRFASQIAAVAVGWQVYDMTSSAFALGMIGLVQFIPTALLVFVAGHAVDRFDRKR
VVQLCQIVEGLTAVFLAVGTYGGWLTVPQIFVAMTLVGIATSFESPAVAALLPSVVPDGTLQRATATSTGFAQLAMITGP
ALGGFAYAFAPGLPYVMMAGFWIAGSVLMPLVVVARPVPTEPSTEIDDLYSGLRFVRSNPAILGTISLDLFAVLLGGATA
LLPIYARDILHTGPWGLGLLRAAPAIGALAMTIFLARHAITSRVGLRMFQAVIVFGVATIVFALSWWLWLSVAALVIMGA
ADTVSVVIRFSLVQLSTPDNMRGRVGAVNFLFINASNQLGQFESGVTAALFGAMPAAVLGGVGTVLVALLWMKLFPTLRK
VERLE
>Mature_404_residues
TTLAASGSLLRHRAFAIYLGARTSSRFASQIAAVAVGWQVYDMTSSAFALGMIGLVQFIPTALLVFVAGHAVDRFDRKRV
VQLCQIVEGLTAVFLAVGTYGGWLTVPQIFVAMTLVGIATSFESPAVAALLPSVVPDGTLQRATATSTGFAQLAMITGPA
LGGFAYAFAPGLPYVMMAGFWIAGSVLMPLVVVARPVPTEPSTEIDDLYSGLRFVRSNPAILGTISLDLFAVLLGGATAL
LPIYARDILHTGPWGLGLLRAAPAIGALAMTIFLARHAITSRVGLRMFQAVIVFGVATIVFALSWWLWLSVAALVIMGAA
DTVSVVIRFSLVQLSTPDNMRGRVGAVNFLFINASNQLGQFESGVTAALFGAMPAAVLGGVGTVLVALLWMKLFPTLRKV
ERLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42721; Mature: 42590

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLAASGSLLRHRAFAIYLGARTSSRFASQIAAVAVGWQVYDMTSSAFALGMIGLVQFI
CCCCCCCCHHHHHHHEEEEEECCCHHHHHHHHHHHHHCHHEEECCHHHHHHHHHHHHHHH
PTALLVFVAGHAVDRFDRKRVVQLCQIVEGLTAVFLAVGTYGGWLTVPQIFVAMTLVGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TSFESPAVAALLPSVVPDGTLQRATATSTGFAQLAMITGPALGGFAYAFAPGLPYVMMAG
HCCCCCHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
FWIAGSVLMPLVVVARPVPTEPSTEIDDLYSGLRFVRSNPAILGTISLDLFAVLLGGATA
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHH
LLPIYARDILHTGPWGLGLLRAAPAIGALAMTIFLARHAITSRVGLRMFQAVIVFGVATI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFALSWWLWLSVAALVIMGAADTVSVVIRFSLVQLSTPDNMRGRVGAVNFLFINASNQLG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEECCCCCC
QFESGVTAALFGAMPAAVLGGVGTVLVALLWMKLFPTLRKVERLE
HHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTLAASGSLLRHRAFAIYLGARTSSRFASQIAAVAVGWQVYDMTSSAFALGMIGLVQFI
CCCCCCCHHHHHHHEEEEEECCCHHHHHHHHHHHHHCHHEEECCHHHHHHHHHHHHHHH
PTALLVFVAGHAVDRFDRKRVVQLCQIVEGLTAVFLAVGTYGGWLTVPQIFVAMTLVGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TSFESPAVAALLPSVVPDGTLQRATATSTGFAQLAMITGPALGGFAYAFAPGLPYVMMAG
HCCCCCHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
FWIAGSVLMPLVVVARPVPTEPSTEIDDLYSGLRFVRSNPAILGTISLDLFAVLLGGATA
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHH
LLPIYARDILHTGPWGLGLLRAAPAIGALAMTIFLARHAITSRVGLRMFQAVIVFGVATI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFALSWWLWLSVAALVIMGAADTVSVVIRFSLVQLSTPDNMRGRVGAVNFLFINASNQLG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEECCCCCC
QFESGVTAALFGAMPAAVLGGVGTVLVALLWMKLFPTLRKVERLE
HHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA