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The map label for this gene is nodN [H]

Identifier: 86750317

GI number: 86750317

Start: 3668043

End: 3668543

Strand: Reverse

Name: nodN [H]

Synonym: RPB_3206

Alternate gene names: 86750317

Gene position: 3668543-3668043 (Counterclockwise)

Preceding gene: 86750318

Following gene: 86750316

Centisome position: 68.81

GC content: 61.68

Gene sequence:

>501_bases
ATGTGGAATGCAGCGCAAAACAACGAGGATTTGATGGGCGCTGAAATCGAACGCGATGCGTATATGAAACTCGTCGGCAC
CGAGATCGGTGTCTCGGAATGGCACCTGATCGATCAGAAGCGGATCGACGCCTTCGCCGACGCCACCGAGGACTGGCAGT
TCATCCACGTCGATCCCGCGCGTGCCGCGCGCGAGACGCCGTTCGGCACCACGATCGCGCACGGCTTTCTCACCGCGTCG
ATGCTGAGCGTGTTCTCCTACGAGGCGCTGCCGAAGATCAAGGGCGCGACGATGGGCGTCAATTACGGCTTCGACCGGCT
GCGTTTCATCTCGCCGGTCAAGGCCGGCTCGCGGGTGCGCGGCCGCTTCATGCTGAGCGAAGCCACTCTGCGCAAGCCGA
ACGAATTGCTGTCGCGTACCAGCGTCAACATCGAAATCGAGGGCGAGAAGCGCTCGGCGCTGGTCGCCGACTGGCTCGGC
CTGATCTACTTCGAACAATAA

Upstream 100 bases:

>100_bases
TCTGATCGAGCGCCGCGCCATCGGCCGGGTCGCGCTGCTGCCGTAGCGCGGAATTTGCAAGCCGCGCGGCGCGAAAATTT
CGCTTGGCGCGGGTTTCGCA

Downstream 100 bases:

>100_bases
TCCGGGAAACAACACACATGGCTATCAGGTTCGACGGACGCGTCGCCATCGTCACCGGCGCGGGCAACGGTTTGGGGCGC
GCGCATGCGCTGGGCCTCGC

Product: MaoC-like dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MWNAAQNNEDLMGAEIERDAYMKLVGTEIGVSEWHLIDQKRIDAFADATEDWQFIHVDPARAARETPFGTTIAHGFLTAS
MLSVFSYEALPKIKGATMGVNYGFDRLRFISPVKAGSRVRGRFMLSEATLRKPNELLSRTSVNIEIEGEKRSALVADWLG
LIYFEQ

Sequences:

>Translated_166_residues
MWNAAQNNEDLMGAEIERDAYMKLVGTEIGVSEWHLIDQKRIDAFADATEDWQFIHVDPARAARETPFGTTIAHGFLTAS
MLSVFSYEALPKIKGATMGVNYGFDRLRFISPVKAGSRVRGRFMLSEATLRKPNELLSRTSVNIEIEGEKRSALVADWLG
LIYFEQ
>Mature_166_residues
MWNAAQNNEDLMGAEIERDAYMKLVGTEIGVSEWHLIDQKRIDAFADATEDWQFIHVDPARAARETPFGTTIAHGFLTAS
MLSVFSYEALPKIKGATMGVNYGFDRLRFISPVKAGSRVRGRFMLSEATLRKPNELLSRTSVNIEIEGEKRSALVADWLG
LIYFEQ

Specific function: Involved in the production of the root hair deformation (HAD) factor specifically on medicago [H]

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the R.leguminosarum biovar viciae counterpart [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 18703; Mature: 18703

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNAAQNNEDLMGAEIERDAYMKLVGTEIGVSEWHLIDQKRIDAFADATEDWQFIHVDPA
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHEEHHHHHHHHHHCCCCCCEEEEECHH
RAARETPFGTTIAHGFLTASMLSVFSYEALPKIKGATMGVNYGFDRLRFISPVKAGSRVR
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCCCCCCCCC
GRFMLSEATLRKPNELLSRTSVNIEIEGEKRSALVADWLGLIYFEQ
EEEEECHHHHCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHEECC
>Mature Secondary Structure
MWNAAQNNEDLMGAEIERDAYMKLVGTEIGVSEWHLIDQKRIDAFADATEDWQFIHVDPA
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHEEHHHHHHHHHHCCCCCCEEEEECHH
RAARETPFGTTIAHGFLTASMLSVFSYEALPKIKGATMGVNYGFDRLRFISPVKAGSRVR
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCCCCCCCCC
GRFMLSEATLRKPNELLSRTSVNIEIEGEKRSALVADWLGLIYFEQ
EEEEECHHHHCCHHHHHHHCCEEEEECCCCCHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909418; 11481432 [H]