| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is guaB [H]
Identifier: 86750304
GI number: 86750304
Start: 3651197
End: 3652693
Strand: Reverse
Name: guaB [H]
Synonym: RPB_3193
Alternate gene names: 86750304
Gene position: 3652693-3651197 (Counterclockwise)
Preceding gene: 86750305
Following gene: 86750303
Centisome position: 68.51
GC content: 67.74
Gene sequence:
>1497_bases ATGGCGTCATTGAGCGGATCACGGCAGTTTCAGGAAGCATACACGTTCGACGACGTGTTGCTGAAGCCCGGCCCGTCGGA CGTGCTGCCGTCCGACGTCGATATTCGCTCCCGGATCACCCGCGCGATTTCGCTCAACATCCCGATCATCGCCTCGGCGA TGGACACCGTGACCGAGGCGCGGATGGCGATCGCGATGGCGCAGGCCGGCGGCATCGGCGTGATCCACCGCAATTTCGAT CCCGAGGGCCAGGCCGCGCAAGTCCGCCAGGTCAAAAAGTTCGAATCCGGCATGGTGGTCAATCCGCTGACCATCGCGCC CGAGGCCAAGCTCGCCGACGCGCTGGCGCTGATGACTCAGTACGGCTTCTCCGGCATCCCGGTGGTGACCGGCGCGCAGG GCGATGGTCCCGGCAAGCTGGTCGGCATCCTCACCAATCGCGACGTCCGCTTCGCCACCGATCCGGCGCAGAAGGTCTCG GAGCTGATGACGCACGAGAACCTCGTCACCGTGCGTGAAGGGGTGAGCCAGGACGAGGCCAAGCGGCTGCTGCATCAGCA CCGCATCGAGAAGCTGCTGGTGGTCGACGATCAATATCGCTGCGTCGGCCTGATCACCGTCAAGGACATGGAAAAGGCGG TCGCGCATCCGCTGGCGTCGAAGGACGCGCAGGGCCGGCTGCGGGTCGCCGCCGCGACCACGGTCGGCGAGGGCGGCTAT GAGCGCACCGAGCGACTGATCGAGGCCGGCGTCGACCTCGTCGTGGTCGACACCGCGCACGGCCATTCGGCGCGCGTGCT GGAAGCGGTGACGCGGATCAAGCGGATCTCCAATGCGGTCCAGGTGATCGCCGGCAATATCGCCACCCGCGACGGCGCGC AGGCGCTGATCGATTCCGGCGCCGACGCCATCAAGGTCGGCATCGGCCCGGGCTCGATCTGCACCACCCGGATCGTCGCC GGCGTCGGCGTGCCGCAGCTCACCGCGATCATGGACGCGGTCGAGGCGGCCAAGAAGGCCGACATTCCGGTGATCGCCGA TGGCGGCATCAAGTACTCGGGCGACCTCGCCAAGGCGCTCGCCGCCGGCGCCGACATCGCGATGGTCGGCTCGCTGCTCG CCGGCACCGACGAGACGCCCGGCGAAGTGTTCCTGTGGCAGGGCCGCTCCTACAAGGCCTATCGCGGCATGGGCTCGGTC GGCGCGATGGCGCGCGGCTCGGCCGATCGCTACTTCCAGCAGGACATCAAGGACACGCTGAAACTGGTGCCCGAAGGCAT CGAGGGCCAGGTGCCGTACAAGGGCCCGGTCGGCAACGTGATGCATCAACTCGCTGGCGGCCTGCGCGCCGCGATGGGCT ATGTCGGCGCGCGGACCCTGACCGAATTCCACGACAAGGCCGAGTTTGTCCGCATCACCGGCGCCGGCCTGCGCGAAAGC CACGTCCACGACGTCACCATCACCCGCGAGAGCCCGAACTATCCGGGCGGGGTGTGA
Upstream 100 bases:
>100_bases CGACGGGCTCGATTCGACGGCGCTGCTGCTGTGGCGCCGAACGCGGCTCCCGTCCCCCGAGCTAGAACGCGGCGTAACCT GCCGCTGAACGGAGTTGGCA
Downstream 100 bases:
>100_bases TAGTTCGCGTGTACTAACGCTTCCTCGGGGACGGAGCGTTACCGCACTCTCTTTCGTCATTTCGGGGCGCGAGCGCAGCT CGCGAACCCGGAATCCATAA
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MASLSGSRQFQEAYTFDDVLLKPGPSDVLPSDVDIRSRITRAISLNIPIIASAMDTVTEARMAIAMAQAGGIGVIHRNFD PEGQAAQVRQVKKFESGMVVNPLTIAPEAKLADALALMTQYGFSGIPVVTGAQGDGPGKLVGILTNRDVRFATDPAQKVS ELMTHENLVTVREGVSQDEAKRLLHQHRIEKLLVVDDQYRCVGLITVKDMEKAVAHPLASKDAQGRLRVAAATTVGEGGY ERTERLIEAGVDLVVVDTAHGHSARVLEAVTRIKRISNAVQVIAGNIATRDGAQALIDSGADAIKVGIGPGSICTTRIVA GVGVPQLTAIMDAVEAAKKADIPVIADGGIKYSGDLAKALAAGADIAMVGSLLAGTDETPGEVFLWQGRSYKAYRGMGSV GAMARGSADRYFQQDIKDTLKLVPEGIEGQVPYKGPVGNVMHQLAGGLRAAMGYVGARTLTEFHDKAEFVRITGAGLRES HVHDVTITRESPNYPGGV
Sequences:
>Translated_498_residues MASLSGSRQFQEAYTFDDVLLKPGPSDVLPSDVDIRSRITRAISLNIPIIASAMDTVTEARMAIAMAQAGGIGVIHRNFD PEGQAAQVRQVKKFESGMVVNPLTIAPEAKLADALALMTQYGFSGIPVVTGAQGDGPGKLVGILTNRDVRFATDPAQKVS ELMTHENLVTVREGVSQDEAKRLLHQHRIEKLLVVDDQYRCVGLITVKDMEKAVAHPLASKDAQGRLRVAAATTVGEGGY ERTERLIEAGVDLVVVDTAHGHSARVLEAVTRIKRISNAVQVIAGNIATRDGAQALIDSGADAIKVGIGPGSICTTRIVA GVGVPQLTAIMDAVEAAKKADIPVIADGGIKYSGDLAKALAAGADIAMVGSLLAGTDETPGEVFLWQGRSYKAYRGMGSV GAMARGSADRYFQQDIKDTLKLVPEGIEGQVPYKGPVGNVMHQLAGGLRAAMGYVGARTLTEFHDKAEFVRITGAGLRES HVHDVTITRESPNYPGGV >Mature_497_residues ASLSGSRQFQEAYTFDDVLLKPGPSDVLPSDVDIRSRITRAISLNIPIIASAMDTVTEARMAIAMAQAGGIGVIHRNFDP EGQAAQVRQVKKFESGMVVNPLTIAPEAKLADALALMTQYGFSGIPVVTGAQGDGPGKLVGILTNRDVRFATDPAQKVSE LMTHENLVTVREGVSQDEAKRLLHQHRIEKLLVVDDQYRCVGLITVKDMEKAVAHPLASKDAQGRLRVAAATTVGEGGYE RTERLIEAGVDLVVVDTAHGHSARVLEAVTRIKRISNAVQVIAGNIATRDGAQALIDSGADAIKVGIGPGSICTTRIVAG VGVPQLTAIMDAVEAAKKADIPVIADGGIKYSGDLAKALAAGADIAMVGSLLAGTDETPGEVFLWQGRSYKAYRGMGSVG AMARGSADRYFQQDIKDTLKLVPEGIEGQVPYKGPVGNVMHQLAGGLRAAMGYVGARTLTEFHDKAEFVRITGAGLRESH VHDVTITRESPNYPGGV
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=456, Percent_Identity=42.5438596491228, Blast_Score=333, Evalue=2e-91, Organism=Homo sapiens, GI34328930, Length=456, Percent_Identity=42.5438596491228, Blast_Score=332, Evalue=4e-91, Organism=Homo sapiens, GI34328928, Length=453, Percent_Identity=42.8256070640177, Blast_Score=332, Evalue=4e-91, Organism=Homo sapiens, GI156616279, Length=456, Percent_Identity=42.5438596491228, Blast_Score=332, Evalue=5e-91, Organism=Homo sapiens, GI66933016, Length=482, Percent_Identity=40.2489626556017, Blast_Score=330, Evalue=2e-90, Organism=Homo sapiens, GI217035152, Length=450, Percent_Identity=42.8888888888889, Blast_Score=328, Evalue=7e-90, Organism=Homo sapiens, GI217035148, Length=456, Percent_Identity=41.6666666666667, Blast_Score=319, Evalue=4e-87, Organism=Homo sapiens, GI217035150, Length=456, Percent_Identity=39.2543859649123, Blast_Score=290, Evalue=2e-78, Organism=Homo sapiens, GI50541956, Length=250, Percent_Identity=38.8, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI50541954, Length=250, Percent_Identity=38.8, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI50541952, Length=250, Percent_Identity=38.8, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI50541948, Length=250, Percent_Identity=38.8, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI156104880, Length=260, Percent_Identity=37.6923076923077, Blast_Score=167, Evalue=2e-41, Organism=Escherichia coli, GI1788855, Length=488, Percent_Identity=57.5819672131148, Blast_Score=514, Evalue=1e-147, Organism=Escherichia coli, GI1786293, Length=249, Percent_Identity=35.3413654618474, Blast_Score=160, Evalue=2e-40, Organism=Caenorhabditis elegans, GI71994385, Length=478, Percent_Identity=38.0753138075314, Blast_Score=285, Evalue=3e-77, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=40.0473933649289, Blast_Score=271, Evalue=6e-73, Organism=Caenorhabditis elegans, GI17560440, Length=247, Percent_Identity=36.8421052631579, Blast_Score=165, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6323585, Length=483, Percent_Identity=39.3374741200828, Blast_Score=340, Evalue=3e-94, Organism=Saccharomyces cerevisiae, GI6322012, Length=483, Percent_Identity=38.9233954451346, Blast_Score=338, Evalue=9e-94, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=39.7515527950311, Blast_Score=329, Evalue=7e-91, Organism=Saccharomyces cerevisiae, GI6319352, Length=337, Percent_Identity=39.1691394658754, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6319353, Length=112, Percent_Identity=40.1785714285714, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24641071, Length=493, Percent_Identity=38.7423935091278, Blast_Score=325, Evalue=6e-89, Organism=Drosophila melanogaster, GI24641073, Length=493, Percent_Identity=38.7423935091278, Blast_Score=325, Evalue=6e-89, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=39.2290249433107, Blast_Score=289, Evalue=3e-78,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52601; Mature: 52470
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLSGSRQFQEAYTFDDVLLKPGPSDVLPSDVDIRSRITRAISLNIPIIASAMDTVTEA CCCCCCCHHHHHHHCHHHEEECCCCCCCCCCCCCHHHHHHHHEEECCCCHHHHHHHHHHH RMAIAMAQAGGIGVIHRNFDPEGQAAQVRQVKKFESGMVVNPLTIAPEAKLADALALMTQ HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEECCEEECCCHHHHHHHHHHHH YGFSGIPVVTGAQGDGPGKLVGILTNRDVRFATDPAQKVSELMTHENLVTVREGVSQDEA CCCCCCCEEECCCCCCCCEEEEEEECCCEEEECCHHHHHHHHHHHCCHHHHHHCCCHHHH KRLLHQHRIEKLLVVDDQYRCVGLITVKDMEKAVAHPLASKDAQGRLRVAAATTVGEGGY HHHHHHHHHHEEEEECCCCEEEEEEEHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCH ERTERLIEAGVDLVVVDTAHGHSARVLEAVTRIKRISNAVQVIAGNIATRDGAQALIDSG HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC ADAIKVGIGPGSICTTRIVAGVGVPQLTAIMDAVEAAKKADIPVIADGGIKYSGDLAKAL CCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHH AAGADIAMVGSLLAGTDETPGEVFLWQGRSYKAYRGMGSVGAMARGSADRYFQQDIKDTL HCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCCCCCCHHHCCCHHHHHHHHHHHHH KLVPEGIEGQVPYKGPVGNVMHQLAGGLRAAMGYVGARTLTEFHDKAEFVRITGAGLRES HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC HVHDVTITRESPNYPGGV CCEEEEEEECCCCCCCCC >Mature Secondary Structure ASLSGSRQFQEAYTFDDVLLKPGPSDVLPSDVDIRSRITRAISLNIPIIASAMDTVTEA CCCCCCHHHHHHHCHHHEEECCCCCCCCCCCCCHHHHHHHHEEECCCCHHHHHHHHHHH RMAIAMAQAGGIGVIHRNFDPEGQAAQVRQVKKFESGMVVNPLTIAPEAKLADALALMTQ HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEECCEEECCCHHHHHHHHHHHH YGFSGIPVVTGAQGDGPGKLVGILTNRDVRFATDPAQKVSELMTHENLVTVREGVSQDEA CCCCCCCEEECCCCCCCCEEEEEEECCCEEEECCHHHHHHHHHHHCCHHHHHHCCCHHHH KRLLHQHRIEKLLVVDDQYRCVGLITVKDMEKAVAHPLASKDAQGRLRVAAATTVGEGGY HHHHHHHHHHEEEEECCCCEEEEEEEHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCH ERTERLIEAGVDLVVVDTAHGHSARVLEAVTRIKRISNAVQVIAGNIATRDGAQALIDSG HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC ADAIKVGIGPGSICTTRIVAGVGVPQLTAIMDAVEAAKKADIPVIADGGIKYSGDLAKAL CCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHH AAGADIAMVGSLLAGTDETPGEVFLWQGRSYKAYRGMGSVGAMARGSADRYFQQDIKDTL HCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCCCCCCHHHCCCHHHHHHHHHHHHH KLVPEGIEGQVPYKGPVGNVMHQLAGGLRAAMGYVGARTLTEFHDKAEFVRITGAGLRES HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC HVHDVTITRESPNYPGGV CCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA