| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750302
Identifier: 86750302
GI number: 86750302
Start: 3649394
End: 3649816
Strand: Reverse
Name: 86750302
Synonym: RPB_3191
Alternate gene names: NA
Gene position: 3649816-3649394 (Counterclockwise)
Preceding gene: 86750303
Following gene: 86750301
Centisome position: 68.46
GC content: 65.96
Gene sequence:
>423_bases ATGTCGGTCCAGATGGTGCTGCTGCCGGTCTTCGTGCTGATCGGACTGACCTTCGCGCTGCTGCTGGGGACGTTCCGGGA GCGGCGGCGCGCGCTGGTGTCGCGCGAGACCCAGATCCGCGACGTCGCGCTCGGGCAGCCGAACTGGCCGGACCGCGCCA CCAAGGTCGCGAACTGCTACAGAAACCAGTTCGAACTGCCGGTGCTGTTCTATGCGCTGATCGCGATCGGGCTGCCGCTG CGCCGGATCGATCTGGTGCTGGTGCTGCTGTCCTGGGTGTTCGTGGTGGCGCGGTTTGCCCATGCCGGCATCTTCGTCAG TTCCAACGATTTCGGGCAGCGGTCGACGGCCTGGTTCGCAGGCGCGCTGGTGCTGCTGGCGATGTGGGTCTATTTCGCGC TGCGCATGCTGCTGCTGATCTGA
Upstream 100 bases:
>100_bases GCAAGCAGCTGGTCCGCGTCGGGCCCGACAAGGCCTGAGAATAAACGCGGACCTCGGCTGCTGCCGGGGTCCGCGCCGCT CTAGTCAACAGGAGGTCGCG
Downstream 100 bases:
>100_bases TATCCCTCGCGCCCCTCGACGATTGAAAGACCGCAATGACCCCCGCCGCACGGCTGTCTGCAGCCATCGACCTGATCGCC ACCATCGACGGCCAGCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSVQMVLLPVFVLIGLTFALLLGTFRERRRALVSRETQIRDVALGQPNWPDRATKVANCYRNQFELPVLFYALIAIGLPL RRIDLVLVLLSWVFVVARFAHAGIFVSSNDFGQRSTAWFAGALVLLAMWVYFALRMLLLI
Sequences:
>Translated_140_residues MSVQMVLLPVFVLIGLTFALLLGTFRERRRALVSRETQIRDVALGQPNWPDRATKVANCYRNQFELPVLFYALIAIGLPL RRIDLVLVLLSWVFVVARFAHAGIFVSSNDFGQRSTAWFAGALVLLAMWVYFALRMLLLI >Mature_139_residues SVQMVLLPVFVLIGLTFALLLGTFRERRRALVSRETQIRDVALGQPNWPDRATKVANCYRNQFELPVLFYALIAIGLPLR RIDLVLVLLSWVFVVARFAHAGIFVSSNDFGQRSTAWFAGALVLLAMWVYFALRMLLLI
Specific function: Unknown
COG id: COG5331
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15926; Mature: 15795
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQMVLLPVFVLIGLTFALLLGTFRERRRALVSRETQIRDVALGQPNWPDRATKVANCY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH RNQFELPVLFYALIAIGLPLRRIDLVLVLLSWVFVVARFAHAGIFVSSNDFGQRSTAWFA HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHH GALVLLAMWVYFALRMLLLI HHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SVQMVLLPVFVLIGLTFALLLGTFRERRRALVSRETQIRDVALGQPNWPDRATKVANCY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH RNQFELPVLFYALIAIGLPLRRIDLVLVLLSWVFVVARFAHAGIFVSSNDFGQRSTAWFA HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHH GALVLLAMWVYFALRMLLLI HHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA