| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is cutL [H]
Identifier: 86750215
GI number: 86750215
Start: 3534345
End: 3536648
Strand: Reverse
Name: cutL [H]
Synonym: RPB_3102
Alternate gene names: 86750215
Gene position: 3536648-3534345 (Counterclockwise)
Preceding gene: 86750216
Following gene: 86750214
Centisome position: 66.33
GC content: 64.58
Gene sequence:
>2304_bases ATGAGCATGACGAAGGTCGCCAATTCGTACATTGGTCGCCCGATGGAGCGGGTCGAGGATCTGCGCATGGTGCGCGGGCG CGGCACTTATGTGGCCGACGTCAACCGGCCGAACCAACTTTATGCGGTCGTGCTGCGCAGCTCGGTGGCGCACGGCATCA TCAGATCGATCGACGTGTCCGCTGCGCTGGCGCTCGACGGCGTTCACCGTGTCCTGACGGCGAACGATTTCGGCGCCGAG GTGCCGGTGATCCCGCTGCGCTTGCAACCGCTGCCGCAACTCGAGCCGTTCCATCAGCCGGTGGTGGCCTCGGGCAAGGT CCGCTATGTCGGCGAACCCGTCGCGGTGGTGATCGCCGACAGCGCGGCGATTGCGGAGGATGCGCTGGAGCGGATCGTGG TCGACATCGACCCGTTGCCGGCGATCGCCAACCGACAGCAGGCGGAAGCGATGGACGCGGTGCTGTTCGAACAGCATCAG TCGAATGTCGCCATCACCTGGACGGCGTTTCGCGGCGACGCCGACGACGCGTTCGAGACCGCCGACTATGTCCGCCGCGA TCGCTTCAAGATCCAGCGACACGCGGCGATGTTCATGGAGCCGCGCGGCTTCGTCGCCGATTGGGATGCGGCTGCCGGCA AGCTCACCGTCTGGGGCGCGGCGAAAACGGCGTGGTACAATCGTCGCGTGCTCGCCGCGGCGCTCGGGCTGGCGCTGGAG GCCGTCGACCTGATCGAGGTCGATGTCGGCGGTGGCTTCGGCTCGCGCGGCGAATTCTATCCGGAGGACTATCTGATTCC GGCGGCCGCCAAGATCGTCGGGCGGCCGGTCAAATGGCTCGAAGATCGCCGCGAACACATGATGAGCGCCAACCACGCGC GCGATATCGAATGCGACGTCGAGTTCGCGATGTCGAAGGAGGGGCGCTTCATCGGCCTGCGTGGCCAAATCTGGGCCGAC ATCGGCGCCTATGTCCGCACTAACGGATCGGTCGGCCCGCGCAATGTCGCGCAATACATGTCGGGGCCGTACGCGATCGA GCACATCGATCTGAAAAGTTCGATGCTCACCACCAACAAGACCCCGTCGGGGACCTATCGCGGACCCGGGCGCTTCGAGA CCGATTTCATTCGCGAGCGCATGATCGATCTGGCGGCTCGCGATCTGAACATCGATCGCGTCGAGCTGCGGCGGCGCAAT CTCGTTGCCGACGCCCAGATGCCGTATCCGCTGGCGTCGATCACCCCCTATGACAGCTCGACCGAGCTCGACAGTGGCGA CTACCACGCCGTGTTCGATCGCTGCCTGAAGGAATTCGCCTGGGCCGACAAGAAGCACCTCAGCGGCAAGCTGATCGATG GCTACTATCACGGGCTCGCCGTCGGCAGCTTCATCGAGGGCGGCGCTGCCGGCCCGAAAGAAGAGGTGCGGCTGGTGCTC GAAATTGGCGGCGGGCTGACGGCCTATCTCGGCTCGTCGTCGGTCGGACAAGGGCTCGAGACCATCATGGCACAGATCGC CGCGGACGCCACCGAGATCGCCTACGACAGAATCACGGTCCGCCACGGCTCGACTACCGACGTCAAGGACGGCTACGGCG CCTACCATTCGCGCTCGACGGTGATGGGCGGCTCGGCGATCCTGCTCGCTGCCGAAAAGCTGAAGCTGTTGATCCGGCAG ACGGCTGCCGCCCGCTTCGGCTGCTCGCTGGAGCAGGTGACGATCGACGGCGAAACCGTGAGGCATGAGGCCAAGCATCT CGCGTTCGCCGATCTGGTCGAGACGCCGCTCGAAGTCGAGGCGGAATTTCTCAACAAGAAATACACCTGGGCCTACGGCA CGCAGGCGGCGCATGTCGCGGTCGACCCGGGCACCGGACACGTCAAGGTTCTCGACTACATGTCGGTCGAGGATGTCGGC CGGATGATCAATCCGCTGACCTTGCACGGGCAGGCGATCGGCTCGATCGTGCAGGGGCTGGGCGGAACGTTCCTGGAGCA TCTGGTCTACGACGATGAAGGCCAACTGCTCACCGGTTCATTCGCCGACTATTTGATGCCGACCGCCTCCGACTTTCCGA ATATCCGGTCGATCACGCTGGAACTGAAGCCGTGTCCGAACAATCCGCTCGGCGCCAAGGGGGCGGGCGAAGGGGGGCTG ATTCCGGTCGGCGGCATCATGGCCAACGCGGTTGCGGACGCGCTGTCTCACCTCGACGTTCAGCCGATGGAGCTGCCGCT GTCGCCGCCGCGAATCTGGCAAATGGTTCAGGATGCCGAGGGCAGGATTCGTGCAAAGTCCTAA
Upstream 100 bases:
>100_bases TCCGCGAGGTGCTGTCCGGCAACCTCTGCCGCTGCACTGGTTACGTCCCCATCGTCGACGCGGTAATGGAAGCGCGCGCC GCCTATGCCGAGGCGCAGCG
Downstream 100 bases:
>100_bases GTTCGATTGATTTTTCCTCGCGGCCCAGCATAGTTGCGGACGGGCAGGGCCGCCTATTTCGGCCGCCGCTCGGCCATGGA GGATAGCGGCTTGGCGCGCA
Product: carbon-monoxide dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 767; Mature: 766
Protein sequence:
>767_residues MSMTKVANSYIGRPMERVEDLRMVRGRGTYVADVNRPNQLYAVVLRSSVAHGIIRSIDVSAALALDGVHRVLTANDFGAE VPVIPLRLQPLPQLEPFHQPVVASGKVRYVGEPVAVVIADSAAIAEDALERIVVDIDPLPAIANRQQAEAMDAVLFEQHQ SNVAITWTAFRGDADDAFETADYVRRDRFKIQRHAAMFMEPRGFVADWDAAAGKLTVWGAAKTAWYNRRVLAAALGLALE AVDLIEVDVGGGFGSRGEFYPEDYLIPAAAKIVGRPVKWLEDRREHMMSANHARDIECDVEFAMSKEGRFIGLRGQIWAD IGAYVRTNGSVGPRNVAQYMSGPYAIEHIDLKSSMLTTNKTPSGTYRGPGRFETDFIRERMIDLAARDLNIDRVELRRRN LVADAQMPYPLASITPYDSSTELDSGDYHAVFDRCLKEFAWADKKHLSGKLIDGYYHGLAVGSFIEGGAAGPKEEVRLVL EIGGGLTAYLGSSSVGQGLETIMAQIAADATEIAYDRITVRHGSTTDVKDGYGAYHSRSTVMGGSAILLAAEKLKLLIRQ TAAARFGCSLEQVTIDGETVRHEAKHLAFADLVETPLEVEAEFLNKKYTWAYGTQAAHVAVDPGTGHVKVLDYMSVEDVG RMINPLTLHGQAIGSIVQGLGGTFLEHLVYDDEGQLLTGSFADYLMPTASDFPNIRSITLELKPCPNNPLGAKGAGEGGL IPVGGIMANAVADALSHLDVQPMELPLSPPRIWQMVQDAEGRIRAKS
Sequences:
>Translated_767_residues MSMTKVANSYIGRPMERVEDLRMVRGRGTYVADVNRPNQLYAVVLRSSVAHGIIRSIDVSAALALDGVHRVLTANDFGAE VPVIPLRLQPLPQLEPFHQPVVASGKVRYVGEPVAVVIADSAAIAEDALERIVVDIDPLPAIANRQQAEAMDAVLFEQHQ SNVAITWTAFRGDADDAFETADYVRRDRFKIQRHAAMFMEPRGFVADWDAAAGKLTVWGAAKTAWYNRRVLAAALGLALE AVDLIEVDVGGGFGSRGEFYPEDYLIPAAAKIVGRPVKWLEDRREHMMSANHARDIECDVEFAMSKEGRFIGLRGQIWAD IGAYVRTNGSVGPRNVAQYMSGPYAIEHIDLKSSMLTTNKTPSGTYRGPGRFETDFIRERMIDLAARDLNIDRVELRRRN LVADAQMPYPLASITPYDSSTELDSGDYHAVFDRCLKEFAWADKKHLSGKLIDGYYHGLAVGSFIEGGAAGPKEEVRLVL EIGGGLTAYLGSSSVGQGLETIMAQIAADATEIAYDRITVRHGSTTDVKDGYGAYHSRSTVMGGSAILLAAEKLKLLIRQ TAAARFGCSLEQVTIDGETVRHEAKHLAFADLVETPLEVEAEFLNKKYTWAYGTQAAHVAVDPGTGHVKVLDYMSVEDVG RMINPLTLHGQAIGSIVQGLGGTFLEHLVYDDEGQLLTGSFADYLMPTASDFPNIRSITLELKPCPNNPLGAKGAGEGGL IPVGGIMANAVADALSHLDVQPMELPLSPPRIWQMVQDAEGRIRAKS >Mature_766_residues SMTKVANSYIGRPMERVEDLRMVRGRGTYVADVNRPNQLYAVVLRSSVAHGIIRSIDVSAALALDGVHRVLTANDFGAEV PVIPLRLQPLPQLEPFHQPVVASGKVRYVGEPVAVVIADSAAIAEDALERIVVDIDPLPAIANRQQAEAMDAVLFEQHQS NVAITWTAFRGDADDAFETADYVRRDRFKIQRHAAMFMEPRGFVADWDAAAGKLTVWGAAKTAWYNRRVLAAALGLALEA VDLIEVDVGGGFGSRGEFYPEDYLIPAAAKIVGRPVKWLEDRREHMMSANHARDIECDVEFAMSKEGRFIGLRGQIWADI GAYVRTNGSVGPRNVAQYMSGPYAIEHIDLKSSMLTTNKTPSGTYRGPGRFETDFIRERMIDLAARDLNIDRVELRRRNL VADAQMPYPLASITPYDSSTELDSGDYHAVFDRCLKEFAWADKKHLSGKLIDGYYHGLAVGSFIEGGAAGPKEEVRLVLE IGGGLTAYLGSSSVGQGLETIMAQIAADATEIAYDRITVRHGSTTDVKDGYGAYHSRSTVMGGSAILLAAEKLKLLIRQT AAARFGCSLEQVTIDGETVRHEAKHLAFADLVETPLEVEAEFLNKKYTWAYGTQAAHVAVDPGTGHVKVLDYMSVEDVGR MINPLTLHGQAIGSIVQGLGGTFLEHLVYDDEGQLLTGSFADYLMPTASDFPNIRSITLELKPCPNNPLGAKGAGEGGLI PVGGIMANAVADALSHLDVQPMELPLSPPRIWQMVQDAEGRIRAKS
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI91823271, Length=742, Percent_Identity=25.3369272237197, Blast_Score=149, Evalue=1e-35, Organism=Homo sapiens, GI71773480, Length=781, Percent_Identity=24.3277848911652, Blast_Score=122, Evalue=1e-27, Organism=Escherichia coli, GI1789246, Length=777, Percent_Identity=25.4826254826255, Blast_Score=197, Evalue=3e-51, Organism=Escherichia coli, GI1789230, Length=770, Percent_Identity=26.2337662337662, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI1786478, Length=756, Percent_Identity=26.984126984127, Blast_Score=149, Evalue=7e-37, Organism=Caenorhabditis elegans, GI17540638, Length=797, Percent_Identity=23.4629861982434, Blast_Score=138, Evalue=9e-33, Organism=Caenorhabditis elegans, GI17539860, Length=702, Percent_Identity=21.2250712250712, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI17737937, Length=781, Percent_Identity=24.9679897567222, Blast_Score=132, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 83529; Mature: 83398
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00879 ODR_DC_2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTKVANSYIGRPMERVEDLRMVRGRGTYVADVNRPNQLYAVVLRSSVAHGIIRSIDVS CCHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCHH AALALDGVHRVLTANDFGAEVPVIPLRLQPLPQLEPFHQPVVASGKVRYVGEPVAVVIAD HHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEC SAAIAEDALERIVVDIDPLPAIANRQQAEAMDAVLFEQHQSNVAITWTAFRGDADDAFET CHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHH ADYVRRDRFKIQRHAAMFMEPRGFVADWDAAAGKLTVWGAAKTAWYNRRVLAAALGLALE HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH AVDLIEVDVGGGFGSRGEFYPEDYLIPAAAKIVGRPVKWLEDRREHMMSANHARDIECDV HEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECE EFAMSKEGRFIGLRGQIWADIGAYVRTNGSVGPRNVAQYMSGPYAIEHIDLKSSMLTTNK EEEECCCCCEEEECCCHHHCCCCCEECCCCCCHHHHHHHCCCCEEEEEEECCHHHEECCC TPSGTYRGPGRFETDFIRERMIDLAARDLNIDRVELRRRNLVADAQMPYPLASITPYDSS CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCEECCCCCCCCCCCCCCCCC TELDSGDYHAVFDRCLKEFAWADKKHLSGKLIDGYYHGLAVGSFIEGGAAGPKEEVRLVL CCCCCCCHHHHHHHHHHHHHCCCHHHCCCEEECHHHHHHHHHHHHCCCCCCCHHHEEEEE EIGGGLTAYLGSSSVGQGLETIMAQIAADATEIAYDRITVRHGSTTDVKDGYGAYHSRST EECCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCCCCCCCCCCCCCCCE VMGGSAILLAAEKLKLLIRQTAAARFGCSLEQVTIDGETVRHEAKHLAFADLVETPLEVE ECCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHH AEFLNKKYTWAYGTQAAHVAVDPGTGHVKVLDYMSVEDVGRMINPLTLHGQAIGSIVQGL HHHCCCEEEEEECCCEEEEEECCCCCCEEEEECCCHHHHHHHHCCEEECHHHHHHHHHHH GGTFLEHLVYDDEGQLLTGSFADYLMPTASDFPNIRSITLELKPCPNNPLGAKGAGEGGL HHHHHHHHEECCCCCEEECCHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCE IPVGGIMANAVADALSHLDVQPMELPLSPPRIWQMVQDAEGRIRAKS EECHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEECC >Mature Secondary Structure SMTKVANSYIGRPMERVEDLRMVRGRGTYVADVNRPNQLYAVVLRSSVAHGIIRSIDVS CHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCHH AALALDGVHRVLTANDFGAEVPVIPLRLQPLPQLEPFHQPVVASGKVRYVGEPVAVVIAD HHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEC SAAIAEDALERIVVDIDPLPAIANRQQAEAMDAVLFEQHQSNVAITWTAFRGDADDAFET CHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHH ADYVRRDRFKIQRHAAMFMEPRGFVADWDAAAGKLTVWGAAKTAWYNRRVLAAALGLALE HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH AVDLIEVDVGGGFGSRGEFYPEDYLIPAAAKIVGRPVKWLEDRREHMMSANHARDIECDV HEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECE EFAMSKEGRFIGLRGQIWADIGAYVRTNGSVGPRNVAQYMSGPYAIEHIDLKSSMLTTNK EEEECCCCCEEEECCCHHHCCCCCEECCCCCCHHHHHHHCCCCEEEEEEECCHHHEECCC TPSGTYRGPGRFETDFIRERMIDLAARDLNIDRVELRRRNLVADAQMPYPLASITPYDSS CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCEECCCCCCCCCCCCCCCCC TELDSGDYHAVFDRCLKEFAWADKKHLSGKLIDGYYHGLAVGSFIEGGAAGPKEEVRLVL CCCCCCCHHHHHHHHHHHHHCCCHHHCCCEEECHHHHHHHHHHHHCCCCCCCHHHEEEEE EIGGGLTAYLGSSSVGQGLETIMAQIAADATEIAYDRITVRHGSTTDVKDGYGAYHSRST EECCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCCCCCCCCCCCCCCCE VMGGSAILLAAEKLKLLIRQTAAARFGCSLEQVTIDGETVRHEAKHLAFADLVETPLEVE ECCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHH AEFLNKKYTWAYGTQAAHVAVDPGTGHVKVLDYMSVEDVGRMINPLTLHGQAIGSIVQGL HHHCCCEEEEEECCCEEEEEECCCCCCEEEEECCCHHHHHHHHCCEEECHHHHHHHHHHH GGTFLEHLVYDDEGQLLTGSFADYLMPTASDFPNIRSITLELKPCPNNPLGAKGAGEGGL HHHHHHHHEECCCCCEEECCHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCE IPVGGIMANAVADALSHLDVQPMELPLSPPRIWQMVQDAEGRIRAKS EECHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]