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The map label for this gene is yoaV [H]

Identifier: 86750121

GI number: 86750121

Start: 3421877

End: 3422803

Strand: Reverse

Name: yoaV [H]

Synonym: RPB_3004

Alternate gene names: 86750121

Gene position: 3422803-3421877 (Counterclockwise)

Preceding gene: 86750122

Following gene: 86750118

Centisome position: 64.2

GC content: 63.32

Gene sequence:

>927_bases
ATGGCGTCAGGAATTCATCCTATTCATCCACGGGATTGGACGCTGCTGATCGCGCTGTCGATCCTGTGGGGCGCATCGTT
CTTTTTCGTGGGCGTGGCCCTGAAAGAGCTGCCGCCTTTCACCATCGTTTTTCTTCGGGCCGCGATCGCGGCGCTGGTCC
TGTTCCTGATCGTTTGGGTCCGCAGGATTCCGATGCCGCGCGGTGTCGTCGGCTGGTGGCCCTTTGTCGGAATGGCCTGT
CTCAACTTCGTCGTTCCGTTCTCCTGTCTCGTGACCGGTCAGACATTCATCTCGACCGGACTGGCGTCCGTGCTCAATGC
GACGACACCTTTGTTCACCGTTGTCGTCATGGCGGCGGCCGGAGAGGAACGGCTGACGGCACGGCGTGTCATCGGAGTCG
TGGCTGGCGTGGTCGGAGTCGCCGTCCTCCGTGGCCTGGACCTGCGGGAAGCCGAGACGGGGATCGGCGTGGCACTGTGT
CTTTGCGCGGCGCTCTCGTATGGGCTGTCGGCGCTACTGGCCCGAAGGCTTCTGATCGGTTTCGCGCCGCTGACCACGGC
GACTTCGCAGATGCTGGCGGCGGCCATCATCACGGGCGTCGTCGCGGCGTGTGTCGATCAGCCATTGAGCCTGCCGGTTC
CGAGCTTGTCGGTCATTCTGGCTGTGGTGGCGCTCGGCACGCTCTCGACCGCGCTCGGCTACGTGCTGTTCTTCCGGATT
GTCGCGCGGTCCGGGTCGACCAACGTCATGCTGGTGACGCTCCTGATCCCAGTCACTGCCATTCTGCTCGGCACCGTCGT
GCTGCACGAAGATATAGGCCTTCGTGAACTGATGGGCGGCAGCATGATTGCCAGCGCGCTTCTTATCATCGACGGCCGAG
CCTTGGCATGGATCGAAGCGCGCCGGTGGCGGACCGAGCGATCCTAA

Upstream 100 bases:

>100_bases
CCGGCACCGCGCCGTTGAACGGCCGTGCGCAACCGGCTTTCGGAATTCGGGTGGCGGCGTGACACTCTCTGCAGGATGAC
TGGCGTCGCGAGGTGCGATC

Downstream 100 bases:

>100_bases
CCCGCCCCCGCCAGCCGCACCCCCGCGCGCAGAAACTTCTGCGGGTCGACCGCTTCACCGTCGATGCGCGTTTCGTAGTG
CAGATGCGGGCCGGTGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MASGIHPIHPRDWTLLIALSILWGASFFFVGVALKELPPFTIVFLRAAIAALVLFLIVWVRRIPMPRGVVGWWPFVGMAC
LNFVVPFSCLVTGQTFISTGLASVLNATTPLFTVVVMAAAGEERLTARRVIGVVAGVVGVAVLRGLDLREAETGIGVALC
LCAALSYGLSALLARRLLIGFAPLTTATSQMLAAAIITGVVAACVDQPLSLPVPSLSVILAVVALGTLSTALGYVLFFRI
VARSGSTNVMLVTLLIPVTAILLGTVVLHEDIGLRELMGGSMIASALLIIDGRALAWIEARRWRTERS

Sequences:

>Translated_308_residues
MASGIHPIHPRDWTLLIALSILWGASFFFVGVALKELPPFTIVFLRAAIAALVLFLIVWVRRIPMPRGVVGWWPFVGMAC
LNFVVPFSCLVTGQTFISTGLASVLNATTPLFTVVVMAAAGEERLTARRVIGVVAGVVGVAVLRGLDLREAETGIGVALC
LCAALSYGLSALLARRLLIGFAPLTTATSQMLAAAIITGVVAACVDQPLSLPVPSLSVILAVVALGTLSTALGYVLFFRI
VARSGSTNVMLVTLLIPVTAILLGTVVLHEDIGLRELMGGSMIASALLIIDGRALAWIEARRWRTERS
>Mature_307_residues
ASGIHPIHPRDWTLLIALSILWGASFFFVGVALKELPPFTIVFLRAAIAALVLFLIVWVRRIPMPRGVVGWWPFVGMACL
NFVVPFSCLVTGQTFISTGLASVLNATTPLFTVVVMAAAGEERLTARRVIGVVAGVVGVAVLRGLDLREAETGIGVALCL
CAALSYGLSALLARRLLIGFAPLTTATSQMLAAAIITGVVAACVDQPLSLPVPSLSVILAVVALGTLSTALGYVLFFRIV
ARSGSTNVMLVTLLIPVTAILLGTVVLHEDIGLRELMGGSMIASALLIIDGRALAWIEARRWRTERS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32580; Mature: 32448

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGIHPIHPRDWTLLIALSILWGASFFFVGVALKELPPFTIVFLRAAIAALVLFLIVWV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RRIPMPRGVVGWWPFVGMACLNFVVPFSCLVTGQTFISTGLASVLNATTPLFTVVVMAAA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GEERLTARRVIGVVAGVVGVAVLRGLDLREAETGIGVALCLCAALSYGLSALLARRLLIG
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAPLTTATSQMLAAAIITGVVAACVDQPLSLPVPSLSVILAVVALGTLSTALGYVLFFRI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VARSGSTNVMLVTLLIPVTAILLGTVVLHEDIGLRELMGGSMIASALLIIDGRALAWIEA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHCCCHHHHHHH
RRWRTERS
HHHHCCCC
>Mature Secondary Structure 
ASGIHPIHPRDWTLLIALSILWGASFFFVGVALKELPPFTIVFLRAAIAALVLFLIVWV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RRIPMPRGVVGWWPFVGMACLNFVVPFSCLVTGQTFISTGLASVLNATTPLFTVVVMAAA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GEERLTARRVIGVVAGVVGVAVLRGLDLREAETGIGVALCLCAALSYGLSALLARRLLIG
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAPLTTATSQMLAAAIITGVVAACVDQPLSLPVPSLSVILAVVALGTLSTALGYVLFFRI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VARSGSTNVMLVTLLIPVTAILLGTVVLHEDIGLRELMGGSMIASALLIIDGRALAWIEA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHCCCHHHHHHH
RRWRTERS
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]