| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750087
Identifier: 86750087
GI number: 86750087
Start: 3382635
End: 3382997
Strand: Reverse
Name: 86750087
Synonym: RPB_2970
Alternate gene names: NA
Gene position: 3382997-3382635 (Counterclockwise)
Preceding gene: 86750088
Following gene: 86750085
Centisome position: 63.45
GC content: 71.07
Gene sequence:
>363_bases ATGACGGCAACTCCTGTCCTGGTGATCCTGAGCGCTGCGACGGCGCTCGGGCTGTATCTGCTGCTGTTGTTCATGCGCGG CGAGCGCAGGCAGGGGCTGGTGGCGCTGCATCTGCTGCTCGGCTTCGGCGGGCTCGAGACGCTGGTGATGCTGCTGCACG GCACGCCGGACGGCGCGGCGCCGATGGGGGGCATTTCGTTCGGCAAGATCGCCGCCGGCCTGTTCGCGGTGTCGGCGTTC TCCGGCTTCATCGCCGCGCTGGCCCGCCGCTCGCCGGTGGCCGCCAATGTGCTGCTCGGCACCCACGTCACCGTGGGCCT CGCCGGCTTCGCGCTGGTGCTGGCCTGGGTGTCGGGGACCTGA
Upstream 100 bases:
>100_bases CCCGCGGCGCGTCGAGATCTGCGTCTCAGGTCGGACTTACCAGACGCGCCGGGCCGTGATTAGATCGCGACCTTTACCCG GCGCGACATGCGGAGGCGGT
Downstream 100 bases:
>100_bases GCCGCCGTCTATTCGCGACCGCCGCTCAGGATCGCACCCGGACGTAGCTGCCGGGGGCGTCCTCGATCGGCTGATAGGTC TCGTTGCCGATGCCGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTATPVLVILSAATALGLYLLLLFMRGERRQGLVALHLLLGFGGLETLVMLLHGTPDGAAPMGGISFGKIAAGLFAVSAF SGFIAALARRSPVAANVLLGTHVTVGLAGFALVLAWVSGT
Sequences:
>Translated_120_residues MTATPVLVILSAATALGLYLLLLFMRGERRQGLVALHLLLGFGGLETLVMLLHGTPDGAAPMGGISFGKIAAGLFAVSAF SGFIAALARRSPVAANVLLGTHVTVGLAGFALVLAWVSGT >Mature_119_residues TATPVLVILSAATALGLYLLLLFMRGERRQGLVALHLLLGFGGLETLVMLLHGTPDGAAPMGGISFGKIAAGLFAVSAFS GFIAALARRSPVAANVLLGTHVTVGLAGFALVLAWVSGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12158; Mature: 12027
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPVLVILSAATALGLYLLLLFMRGERRQGLVALHLLLGFGGLETLVMLLHGTPDGAA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCC PMGGISFGKIAAGLFAVSAFSGFIAALARRSPVAANVLLGTHVTVGLAGFALVLAWVSGT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TATPVLVILSAATALGLYLLLLFMRGERRQGLVALHLLLGFGGLETLVMLLHGTPDGAA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCC PMGGISFGKIAAGLFAVSAFSGFIAALARRSPVAANVLLGTHVTVGLAGFALVLAWVSGT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA