| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86750085
Identifier: 86750085
GI number: 86750085
Start: 3380150
End: 3380461
Strand: Reverse
Name: 86750085
Synonym: RPB_2968
Alternate gene names: NA
Gene position: 3380461-3380150 (Counterclockwise)
Preceding gene: 86750087
Following gene: 86750084
Centisome position: 63.4
GC content: 70.51
Gene sequence:
>312_bases ATGCCCGGAGCGAACGGCGGAGATCGGGGTCATCGGCGCGCCGGTCTGGCCGCGGCGGTGCTGCTGGCCGGGCTCTGCCT CGGCGGTTGCTCGATCTCGCTGTCCGACATGCCGCTGATGGGCGCCAGCGACAAGGTCGAGAAGCCGAAGGAGGCGGAAG CCTTCCCGGCGGTCAACGATTTGCCGGCCAACCGCGACGAGGCCGTGCTGGCTCCCGCCGAGCGCAACAAGATCGAGCAG GAACTGATTGCCGCCCGCGAGCGCCAGGCGAACGCCAATGCCAGCGCCGCCAAGCCGGCCGCCGCCAAATAG
Upstream 100 bases:
>100_bases CCGCCTTGGTTCGGGCGGATCACGAAGAGGGCTCCGGTGCGCGTCTGGCCGCCGCGAGCAAGGGAACAGCGTTTTGCGCG TGATGCGAGAGGCGGGGCCG
Downstream 100 bases:
>100_bases CCGTCAGCGTCGCCGGTGCACGAACGGCGACGGTGGCGGGTCACCGTTCGCAGGTCGGCGCAGCACAAACACCGTCCTCG ACCCGATCCGCCGCAAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MPGANGGDRGHRRAGLAAAVLLAGLCLGGCSISLSDMPLMGASDKVEKPKEAEAFPAVNDLPANRDEAVLAPAERNKIEQ ELIAARERQANANASAAKPAAAK
Sequences:
>Translated_103_residues MPGANGGDRGHRRAGLAAAVLLAGLCLGGCSISLSDMPLMGASDKVEKPKEAEAFPAVNDLPANRDEAVLAPAERNKIEQ ELIAARERQANANASAAKPAAAK >Mature_102_residues PGANGGDRGHRRAGLAAAVLLAGLCLGGCSISLSDMPLMGASDKVEKPKEAEAFPAVNDLPANRDEAVLAPAERNKIEQE LIAARERQANANASAAKPAAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10516; Mature: 10385
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGANGGDRGHRRAGLAAAVLLAGLCLGGCSISLSDMPLMGASDKVEKPKEAEAFPAVND CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPANRDEAVLAPAERNKIEQELIAARERQANANASAAKPAAAK CCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PGANGGDRGHRRAGLAAAVLLAGLCLGGCSISLSDMPLMGASDKVEKPKEAEAFPAVND CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPANRDEAVLAPAERNKIEQELIAARERQANANASAAKPAAAK CCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA