| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yeaX [C]
Identifier: 86750059
GI number: 86750059
Start: 3354459
End: 3355793
Strand: Reverse
Name: yeaX [C]
Synonym: RPB_2942
Alternate gene names: 86750059
Gene position: 3355793-3354459 (Counterclockwise)
Preceding gene: 86750060
Following gene: 86750058
Centisome position: 62.94
GC content: 61.95
Gene sequence:
>1335_bases ATGCAGACTCCGAGAGTGGCGACCGCATTCGTTGGAGCAGTCGGTATACTGCTGGGATTGTGGCTGCTCAGCCTGGCGCC GGACGACTTCAGGCAAGGGTTCTGGGCCACACGCACGACGCTGGTTTATGGCACCGGCGTGATGGCGCTCGGCCTGATGT CGATCGGCGTGATTCTGGCGGCCCGGCCGGTGTGGTTCGAGACCCCCTTGGGTGGTCTCGACAAATTCTATCGCCTGCAC AAATGGCTCGGGATTTCAGTGCTGGGGTTCGCGATTGCGCATTGGCTGCTGCGCAAGGGGCCGTCGTGGATCAGCGAAAC TGGGCTGTTCGCGATCCCGCCGAAGCCGCCGCATGCGGAAGGAGTTGAACCCGGCTTCAACCTGTTTGCATACCTCAAGC ATCCGGCCGCGGAAATCGGCGAGTGGGCGCTCTATGCCCTCATTGCATTGGTGGCGATCGCGCTGTGGAAACGGTTTCCC TACAAATATTTCTTCATGACGCATCGGCTGATGCCGGCGGTCTATCTGGTGCTGGTGTTTCACGCCTTCATCCTGATCGA CCGCAGCTACTGGACCAAACCGCTCGGTCCGGTGCTGGCAGTTCTGTTGCTCGCCGGCACGGTTGCGGCGCTGACCTCGC TGTTTGGGCGGATCGGCAGATCGCGAAAGGCAACCGGAGCGATCGCGACGCTGTCGCTGCACGATGACAACCAGATGCTC GAAGTCGGTGTCCGGCTGCAAACCGCCTGGCGCGGGCACGAGGCCGGCCAATTTGCATTCGTCGACTTCGATGATGTCGA GGCGGCACATCCGTTCACCATCACCTCGGCCTGGCACGACGACGGGTTGCTCGAGTTCTCGATCAAGGGGCTCGGCGACT ACACACGAACGCTCGCGGCCAGCTTGCACGTGGGGCAGGGGGTCGTTGTCGAGGGTCCCTATGGCCGGTTCGATTTCCAG GGCGATGGCAGCCGGCAGATCTGGATCGGCGGCGGGGTCGGAATTACGCCCTTCATTGCGCGCCTGAAACAACTCGTTCG GGTCGGCCGGTCTGATCCGATCGACCTGTTCTATGCGACGAATACGCCGGACTCCGGCTTCATCGCTCCAATCCGGCGAC TAGCTCAGCAGACCGGGACCGTGTTTCATCTGGTGGATGGTTCGCAGAACGACCGCCTCACCGTGGAGAAGCTCGCCGCC ATGGTGCCGGAATGGAAGCAAGCCGACATCTGGTTTTGCGGCCCAAGCGCCTTCGGCGACGCCATGCGCCGAACGATGAT CACGCAAGGACTGCCGGCTTCCCGCTTTCATCAGGAGCTGTTCGAAATGCGTTAG
Upstream 100 bases:
>100_bases ACTAGAGCGCAGGATTTCCCACGAGCAGTTTCGCAAGAGCGGGCTTGCCCTCCGGGCGGCCCGCAAATCTTGCATTTGGC GATGGCGATCGAGGCGAACC
Downstream 100 bases:
>100_bases TCAATCGGCCAGTGAAGTGGGCCGGCTTAGCCGCCGGCCACAATCGTAAGTGCCCCGGATCCGCCAGACAGCGCGCCCGA CCAAAGCGTCAATGTTGCCT
Product: flavodoxin oxidoreductase precursor
Products: NA
Alternate protein names: Ferric Reductase Domain-Containing Protein; Flavodoxin Oxidoreductase; Ferric Reductase-Like Transmembrane Component-Like; Flavocytochrome; Ferric Reductase; Ferric Reductase Domain Protein Transmembrane Component; Membrane Flavodoxin Oxidoreductase; Oxidoreductase Membrane Protein; Membrane-Bound Oxidoreductase; Ferredoxin; Flavocytochrome Protein; Hmp Protein; Ferric Reductase Like Transmembrane Component Family; Flavocytochrome Subuit Of Oxidoreductase
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MQTPRVATAFVGAVGILLGLWLLSLAPDDFRQGFWATRTTLVYGTGVMALGLMSIGVILAARPVWFETPLGGLDKFYRLH KWLGISVLGFAIAHWLLRKGPSWISETGLFAIPPKPPHAEGVEPGFNLFAYLKHPAAEIGEWALYALIALVAIALWKRFP YKYFFMTHRLMPAVYLVLVFHAFILIDRSYWTKPLGPVLAVLLLAGTVAALTSLFGRIGRSRKATGAIATLSLHDDNQML EVGVRLQTAWRGHEAGQFAFVDFDDVEAAHPFTITSAWHDDGLLEFSIKGLGDYTRTLAASLHVGQGVVVEGPYGRFDFQ GDGSRQIWIGGGVGITPFIARLKQLVRVGRSDPIDLFYATNTPDSGFIAPIRRLAQQTGTVFHLVDGSQNDRLTVEKLAA MVPEWKQADIWFCGPSAFGDAMRRTMITQGLPASRFHQELFEMR
Sequences:
>Translated_444_residues MQTPRVATAFVGAVGILLGLWLLSLAPDDFRQGFWATRTTLVYGTGVMALGLMSIGVILAARPVWFETPLGGLDKFYRLH KWLGISVLGFAIAHWLLRKGPSWISETGLFAIPPKPPHAEGVEPGFNLFAYLKHPAAEIGEWALYALIALVAIALWKRFP YKYFFMTHRLMPAVYLVLVFHAFILIDRSYWTKPLGPVLAVLLLAGTVAALTSLFGRIGRSRKATGAIATLSLHDDNQML EVGVRLQTAWRGHEAGQFAFVDFDDVEAAHPFTITSAWHDDGLLEFSIKGLGDYTRTLAASLHVGQGVVVEGPYGRFDFQ GDGSRQIWIGGGVGITPFIARLKQLVRVGRSDPIDLFYATNTPDSGFIAPIRRLAQQTGTVFHLVDGSQNDRLTVEKLAA MVPEWKQADIWFCGPSAFGDAMRRTMITQGLPASRFHQELFEMR >Mature_444_residues MQTPRVATAFVGAVGILLGLWLLSLAPDDFRQGFWATRTTLVYGTGVMALGLMSIGVILAARPVWFETPLGGLDKFYRLH KWLGISVLGFAIAHWLLRKGPSWISETGLFAIPPKPPHAEGVEPGFNLFAYLKHPAAEIGEWALYALIALVAIALWKRFP YKYFFMTHRLMPAVYLVLVFHAFILIDRSYWTKPLGPVLAVLLLAGTVAALTSLFGRIGRSRKATGAIATLSLHDDNQML EVGVRLQTAWRGHEAGQFAFVDFDDVEAAHPFTITSAWHDDGLLEFSIKGLGDYTRTLAASLHVGQGVVVEGPYGRFDFQ GDGSRQIWIGGGVGITPFIARLKQLVRVGRSDPIDLFYATNTPDSGFIAPIRRLAQQTGTVFHLVDGSQNDRLTVEKLAA MVPEWKQADIWFCGPSAFGDAMRRTMITQGLPASRFHQELFEMR
Specific function: Unknown
COG id: COG4097
COG function: function code P; Predicted ferric reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 49085; Mature: 49085
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTPRVATAFVGAVGILLGLWLLSLAPDDFRQGFWATRTTLVYGTGVMALGLMSIGVILA CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHEEEECCHHHHHHHHHHHHHHH ARPVWFETPLGGLDKFYRLHKWLGISVLGFAIAHWLLRKGPSWISETGLFAIPPKPPHAE CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEECCCCCCCC GVEPGFNLFAYLKHPAAEIGEWALYALIALVAIALWKRFPYKYFFMTHRLMPAVYLVLVF CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH HAFILIDRSYWTKPLGPVLAVLLLAGTVAALTSLFGRIGRSRKATGAIATLSLHDDNQML HHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEE EVGVRLQTAWRGHEAGQFAFVDFDDVEAAHPFTITSAWHDDGLLEFSIKGLGDYTRTLAA HHHHHHEEHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHH SLHVGQGVVVEGPYGRFDFQGDGSRQIWIGGGVGITPFIARLKQLVRVGRSDPIDLFYAT HHCCCCCEEEECCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEC NTPDSGFIAPIRRLAQQTGTVFHLVDGSQNDRLTVEKLAAMVPEWKQADIWFCGPSAFGD CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHH AMRRTMITQGLPASRFHQELFEMR HHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MQTPRVATAFVGAVGILLGLWLLSLAPDDFRQGFWATRTTLVYGTGVMALGLMSIGVILA CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHEEEECCHHHHHHHHHHHHHHH ARPVWFETPLGGLDKFYRLHKWLGISVLGFAIAHWLLRKGPSWISETGLFAIPPKPPHAE CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEECCCCCCCC GVEPGFNLFAYLKHPAAEIGEWALYALIALVAIALWKRFPYKYFFMTHRLMPAVYLVLVF CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH HAFILIDRSYWTKPLGPVLAVLLLAGTVAALTSLFGRIGRSRKATGAIATLSLHDDNQML HHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEE EVGVRLQTAWRGHEAGQFAFVDFDDVEAAHPFTITSAWHDDGLLEFSIKGLGDYTRTLAA HHHHHHEEHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHH SLHVGQGVVVEGPYGRFDFQGDGSRQIWIGGGVGITPFIARLKQLVRVGRSDPIDLFYAT HHCCCCCEEEECCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEC NTPDSGFIAPIRRLAQQTGTVFHLVDGSQNDRLTVEKLAAMVPEWKQADIWFCGPSAFGD CCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHH AMRRTMITQGLPASRFHQELFEMR HHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA