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The map label for this gene is yajC [H]

Identifier: 86749850

GI number: 86749850

Start: 3117216

End: 3117644

Strand: Reverse

Name: yajC [H]

Synonym: RPB_2733

Alternate gene names: 86749850

Gene position: 3117644-3117216 (Counterclockwise)

Preceding gene: 86749853

Following gene: 86749849

Centisome position: 58.47

GC content: 63.64

Gene sequence:

>429_bases
ATGTTTGTTACTCCTGCATTTGCTCAGGCCGCGGCCGCCGGCGGCGACGCCAACAGCATGCTGATGTCGCTGCTGCCGTT
CGCGCTGATCTTCGTCATCATGTATTTCCTGATCCTGCGGCCGCAGCAGCGCAAGGTGAAGGAGCACGCCGAACTGGTGA
AGAACATCCGCCGCGGCGACACCATCATCACCTCGGGCGGCCTGGTCGGCAAGGTGACCAAGGTGGTCGACGACGACCAG
ATCGAGTTCGAACTCGCCGACGGTGTCCGCGCGCGCCAGATGCGCCAGATGATCACCGGCGTCCGCACCAAGGGCGAGCC
GGTCAAGGACGTTCCCGAGAAGGGCAAGGGCAAGTCCAAGGACAAGGACGCCGACGACAAGGCCGAATCGGCCAAGGACT
CGACCAAGGACGACACCGCGTCGAGCTGA

Upstream 100 bases:

>100_bases
TTGCAATTGGGACCGCGGCCGCTATAGTCCGCGCGAATTTGCGCCCCCCGGACGTCGCCCTCGCGCCGCGCCGGCTCGCT
TCTTTTCACGGGGAATCCGG

Downstream 100 bases:

>100_bases
CGCGGTCGCGGCGCCTTCTCAGGTTTCTGACGGGACAACTCGATGCTGTATTTCACACGGTGGAAGGCGCTGGCGGTCAT
TGTGACGGCGCTGGCGGTGT

Product: preprotein translocase, YajC subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MFVTPAFAQAAAAGGDANSMLMSLLPFALIFVIMYFLILRPQQRKVKEHAELVKNIRRGDTIITSGGLVGKVTKVVDDDQ
IEFELADGVRARQMRQMITGVRTKGEPVKDVPEKGKGKSKDKDADDKAESAKDSTKDDTASS

Sequences:

>Translated_142_residues
MFVTPAFAQAAAAGGDANSMLMSLLPFALIFVIMYFLILRPQQRKVKEHAELVKNIRRGDTIITSGGLVGKVTKVVDDDQ
IEFELADGVRARQMRQMITGVRTKGEPVKDVPEKGKGKSKDKDADDKAESAKDSTKDDTASS
>Mature_142_residues
MFVTPAFAQAAAAGGDANSMLMSLLPFALIFVIMYFLILRPQQRKVKEHAELVKNIRRGDTIITSGGLVGKVTKVVDDDQ
IEFELADGVRARQMRQMITGVRTKGEPVKDVPEKGKGKSKDKDADDKAESAKDSTKDDTASS

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=98, Percent_Identity=42.8571428571429, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 15471; Mature: 15471

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVTPAFAQAAAAGGDANSMLMSLLPFALIFVIMYFLILRPQQRKVKEHAELVKNIRRGD
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
TIITSGGLVGKVTKVVDDDQIEFELADGVRARQMRQMITGVRTKGEPVKDVPEKGKGKSK
EEEECCCHHHHHHHHHCCCCCEEHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
DKDADDKAESAKDSTKDDTASS
CCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFVTPAFAQAAAAGGDANSMLMSLLPFALIFVIMYFLILRPQQRKVKEHAELVKNIRRGD
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
TIITSGGLVGKVTKVVDDDQIEFELADGVRARQMRQMITGVRTKGEPVKDVPEKGKGKSK
EEEECCCHHHHHHHHHCCCCCEEHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
DKDADDKAESAKDSTKDDTASS
CCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]