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The map label for this gene is secF [H]

Identifier: 86749848

GI number: 86749848

Start: 3114443

End: 3115546

Strand: Reverse

Name: secF [H]

Synonym: RPB_2731

Alternate gene names: 86749848

Gene position: 3115546-3114443 (Counterclockwise)

Preceding gene: 86749849

Following gene: 86749847

Centisome position: 58.43

GC content: 63.86

Gene sequence:

>1104_bases
GTGACATCGACACAGTGGATTTTGATCGGGCTGGGCGCGTTGGTCGTGGCGCTGACGATCGTCAGCATCATGGGCTGGCT
GCCGTCGCTGCGGATCGTGCCCGACGACACGCATTTCGACTTCACCCAATTCCGGCGGATCAGTTTTCCGATCTCGGCGC
TGCTGTCGATCGCCGCGATCACGCTGTTCTTCACCCACGGGCTGAACTTCGGCATCGACTTCAAGGGCGGCACGCTGCTC
GAGGTCAGGGCTCATTCCGGCGCGGCCGATATCCCCGGGATGCGCGACACGCTGAGCAAACTCGGGCTCGGTGAAGTCCA
GCTCCAGCAATTCGGCGGTCCGTCCGAGGTGCTGATCCGCGTTGCCGAACAGCCCGGCGGCGACGCCGCGCAGCAGGAGG
CGGTGCAGAAGGTGCGCGGCGCGCTCGGCAATTCGGTCGACTATCGCCGCGTCGAAGTGGTCGGCCCGCGCGTCTCGAGC
GAACTCCTGGCCTACGGCATGCTCGGCCTGATGCTCGCGATCCTGGGCATTCTGGTCTATCTCTGGTTCCGGTTCGAATG
GCAGTTCGCGCTCGGCGCGATGATCGCCAACGTCCACGACATCGTGCTGACGATCGGCTTCATGTCGATCAGCCAGGTCG
ATTTCGACCTCACCAGCATCGCGGCGCTGCTGACGATTCTCGGCTATTCGCTCAACGACACCGTGGTGATCTACGACCGC
ATCCGCGAGATGCTGCGGCGCTACAAGAAGATGCCGATGCCGCAGCTTCTGAACGAGTCGATCAACTCGACGCTGTCGCG
CTCGATCATCACCCACGTCACCGTGACGCTGGCGCTGTTCGCGCTGCTGCTGTTCGGCGGCAACGCGATCCACTCCTTCA
CGGCGGTGATGATGTTCGGCGTGGTGCTGGTCGGCACCTACACCTCGATCTTCATCGCGGCGCCGATCCTGATCTATCTC
GGCGTCGGCACGCATCGGCTCGACGATCCGTCGGAAAAAACCGAACGGTCGGAAAAGGCCGCGGCGCTGGCGACACCCGA
GGGGGCCGCGATTCCCCAGACGGCCGAGAAGCCGAAGAAGCCTGTGAAGTCGGGGAAGCGCTGA

Upstream 100 bases:

>100_bases
ACCGCCTTCACCGTGACCCGGCTGATCGTTGCCACCTGGGTGCGGTGGAAGCGGCCGCAGACCGTGCCGATCTGACGCCC
ATCATCCGAAAGAGCTGCAA

Downstream 100 bases:

>100_bases
GCTTTGGCGGACCGCCCGGAGATCCCGCATTTTCCGCGCACGGCCTCGGTCGAGGCCTATGGCAAGGGCGGGTTCTATTT
CGGCGACATGTCGCATGTCG

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTSTQWILIGLGALVVALTIVSIMGWLPSLRIVPDDTHFDFTQFRRISFPISALLSIAAITLFFTHGLNFGIDFKGGTLL
EVRAHSGAADIPGMRDTLSKLGLGEVQLQQFGGPSEVLIRVAEQPGGDAAQQEAVQKVRGALGNSVDYRRVEVVGPRVSS
ELLAYGMLGLMLAILGILVYLWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDR
IREMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALFALLLFGGNAIHSFTAVMMFGVVLVGTYTSIFIAAPILIYL
GVGTHRLDDPSEKTERSEKAAALATPEGAAIPQTAEKPKKPVKSGKR

Sequences:

>Translated_367_residues
MTSTQWILIGLGALVVALTIVSIMGWLPSLRIVPDDTHFDFTQFRRISFPISALLSIAAITLFFTHGLNFGIDFKGGTLL
EVRAHSGAADIPGMRDTLSKLGLGEVQLQQFGGPSEVLIRVAEQPGGDAAQQEAVQKVRGALGNSVDYRRVEVVGPRVSS
ELLAYGMLGLMLAILGILVYLWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDR
IREMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALFALLLFGGNAIHSFTAVMMFGVVLVGTYTSIFIAAPILIYL
GVGTHRLDDPSEKTERSEKAAALATPEGAAIPQTAEKPKKPVKSGKR
>Mature_366_residues
TSTQWILIGLGALVVALTIVSIMGWLPSLRIVPDDTHFDFTQFRRISFPISALLSIAAITLFFTHGLNFGIDFKGGTLLE
VRAHSGAADIPGMRDTLSKLGLGEVQLQQFGGPSEVLIRVAEQPGGDAAQQEAVQKVRGALGNSVDYRRVEVVGPRVSSE
LLAYGMLGLMLAILGILVYLWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDRI
REMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALFALLLFGGNAIHSFTAVMMFGVVLVGTYTSIFIAAPILIYLG
VGTHRLDDPSEKTERSEKAAALATPEGAAIPQTAEKPKKPVKSGKR

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=299, Percent_Identity=38.1270903010033, Blast_Score=212, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 39965; Mature: 39834

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTQWILIGLGALVVALTIVSIMGWLPSLRIVPDDTHFDFTQFRRISFPISALLSIAAI
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHCCHHHHHHHHHH
TLFFTHGLNFGIDFKGGTLLEVRAHSGAADIPGMRDTLSKLGLGEVQLQQFGGPSEVLIR
HHHHHHCCCCEEECCCCEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHCCCHHHHHHH
VAEQPGGDAAQQEAVQKVRGALGNSVDYRRVEVVGPRVSSELLAYGMLGLMLAILGILVY
HHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
LWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEHHH
IREMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALFALLLFGGNAIHSFTAVMMFG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VVLVGTYTSIFIAAPILIYLGVGTHRLDDPSEKTERSEKAAALATPEGAAIPQTAEKPKK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCH
PVKSGKR
HHCCCCC
>Mature Secondary Structure 
TSTQWILIGLGALVVALTIVSIMGWLPSLRIVPDDTHFDFTQFRRISFPISALLSIAAI
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHCCHHHHHHHHHH
TLFFTHGLNFGIDFKGGTLLEVRAHSGAADIPGMRDTLSKLGLGEVQLQQFGGPSEVLIR
HHHHHHCCCCEEECCCCEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHCCCHHHHHHH
VAEQPGGDAAQQEAVQKVRGALGNSVDYRRVEVVGPRVSSELLAYGMLGLMLAILGILVY
HHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
LWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEHHH
IREMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALFALLLFGGNAIHSFTAVMMFG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VVLVGTYTSIFIAAPILIYLGVGTHRLDDPSEKTERSEKAAALATPEGAAIPQTAEKPKK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCH
PVKSGKR
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA