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The map label for this gene is yfeW [C]

Identifier: 86749825

GI number: 86749825

Start: 3092635

End: 3093945

Strand: Reverse

Name: yfeW [C]

Synonym: RPB_2708

Alternate gene names: 86749825

Gene position: 3093945-3092635 (Counterclockwise)

Preceding gene: 86749826

Following gene: 86749820

Centisome position: 58.03

GC content: 68.19

Gene sequence:

>1311_bases
ATGCCCGACACCCGACATGCCCCGCGCACAGCGATGCGCACCCGACGATGGACCCTGGCGCCGGCTGCTCTGACGCTGCT
GTGGCTGTCGATCGCGCCGGCCGCCGCCGTGGATTGCGGGCCCGATGCGCCGTCGCCCGCCGCCGCGCGGTTCGCCGGCG
TGACCGCGTTTTTCGACCAGGAGATCGCCACCGGCAGGCTGCCCGGCGCGGTGGTGCTGATCGCGCAGCGCGGCAAGCCG
ACCTATCTGCGCTGCTTCGGCGTGCGCGACGTGACGCGGCGCGACCCGATGACGCCGGACACGATGTTCGCGCTGCGTTC
GATGACCAAGCCGATCACCAGCGTCGTGGCGATGATGCTGATCGACGACGGCAAGCTGTCGCTCGACGATCCGGTGTCGA
AATTCATTCCGGCCTTCGCCGGGGTCCGGGTCGGCATCGAAACCGTGGATGCCGACGGCAAGCCGGTGCTCGAACGCGTC
GCCCCGGACCGGCCGGTGACGATCGCGGACCTGTTGCGGCACACGTCCGGGATTACTTACGAATATATCGGCGGCGAGCT
GATCCGGCAGGCCTACAACGACGCGAACATCTTCGCCGGCGCGTTCGACAATGCGGTGTTCGCCGAGCGGATCGCGCGGC
TGCCGCTGGCGCGGCAACCCGGCACGCTGTGGCGCTACGGCCATTCCACCGACGTCCTCGGGCGGGTCATCGAGATCGTC
ACCGGGCGGACGCTGTATCAGGTCATGAAGCAACGCATCTTCGATCCGCTCGGGATGACCAGCACTAAATTCGTGCTCGA
CAGCGACGACGAGCGGGCGCGAATGGCCGAGCCGTTGCCGGACGACACGGTTCTGGTCGACTCCGAACGCCAACGCCGCG
CCCATCCGGAATGGCAGTCGGGCGGCGGCGGCCTGGTCTCGACCGTCACCGACTATGCACGCTTCGCCCGGATGATCCTG
GACGGCGGCGAACTCGACGGGCGGCGCTACCTCAGTCCCGCGGCGTTCAAGGCGATGACCACCGACCACATCGGCCCGGG
CACGGGCGTCGAACGGGACTACTTCTATTTCCCCGGCGACGGCTTCGGTTTCGGCTACGGCTTCGCGGTGCGCACTGAAC
CCGGCGAAGCGAAGCCGCCGCCACCGGGCTCGATCGGCGAGTTGAAATGGGACGGTGGCAGCGGCACCTATTTCGGCGTC
GATCCCAAACTCGGGGTGATCACCATCCTGATGCAGCAGACCGAGCGCCAGCGGGGGCGCGACGTGCCGGCGTTCAAGAA
GCTGGTCTACGACGCGCTGGCGAGCGACTGA

Upstream 100 bases:

>100_bases
ATAGCACCCAAGCCGCTGTCATCCGGATCATCTCTGCGTATGATAGCTCTTCGCCGCACCGATCGCGATTGTCGGTCGAC
CCATTGAACCGGCGAGCGAG

Downstream 100 bases:

>100_bases
AGCAGCGAGCGCCGGCCGGCGAACGTCGTCCATGCCGACAGCGCCATCCGGCCCTTGATGCTCATCGGTCTTTCCAGCGT
CGACAATTGCTCGGGCTCGC

Product: Beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MPDTRHAPRTAMRTRRWTLAPAALTLLWLSIAPAAAVDCGPDAPSPAAARFAGVTAFFDQEIATGRLPGAVVLIAQRGKP
TYLRCFGVRDVTRRDPMTPDTMFALRSMTKPITSVVAMMLIDDGKLSLDDPVSKFIPAFAGVRVGIETVDADGKPVLERV
APDRPVTIADLLRHTSGITYEYIGGELIRQAYNDANIFAGAFDNAVFAERIARLPLARQPGTLWRYGHSTDVLGRVIEIV
TGRTLYQVMKQRIFDPLGMTSTKFVLDSDDERARMAEPLPDDTVLVDSERQRRAHPEWQSGGGGLVSTVTDYARFARMIL
DGGELDGRRYLSPAAFKAMTTDHIGPGTGVERDYFYFPGDGFGFGYGFAVRTEPGEAKPPPPGSIGELKWDGGSGTYFGV
DPKLGVITILMQQTERQRGRDVPAFKKLVYDALASD

Sequences:

>Translated_436_residues
MPDTRHAPRTAMRTRRWTLAPAALTLLWLSIAPAAAVDCGPDAPSPAAARFAGVTAFFDQEIATGRLPGAVVLIAQRGKP
TYLRCFGVRDVTRRDPMTPDTMFALRSMTKPITSVVAMMLIDDGKLSLDDPVSKFIPAFAGVRVGIETVDADGKPVLERV
APDRPVTIADLLRHTSGITYEYIGGELIRQAYNDANIFAGAFDNAVFAERIARLPLARQPGTLWRYGHSTDVLGRVIEIV
TGRTLYQVMKQRIFDPLGMTSTKFVLDSDDERARMAEPLPDDTVLVDSERQRRAHPEWQSGGGGLVSTVTDYARFARMIL
DGGELDGRRYLSPAAFKAMTTDHIGPGTGVERDYFYFPGDGFGFGYGFAVRTEPGEAKPPPPGSIGELKWDGGSGTYFGV
DPKLGVITILMQQTERQRGRDVPAFKKLVYDALASD
>Mature_435_residues
PDTRHAPRTAMRTRRWTLAPAALTLLWLSIAPAAAVDCGPDAPSPAAARFAGVTAFFDQEIATGRLPGAVVLIAQRGKPT
YLRCFGVRDVTRRDPMTPDTMFALRSMTKPITSVVAMMLIDDGKLSLDDPVSKFIPAFAGVRVGIETVDADGKPVLERVA
PDRPVTIADLLRHTSGITYEYIGGELIRQAYNDANIFAGAFDNAVFAERIARLPLARQPGTLWRYGHSTDVLGRVIEIVT
GRTLYQVMKQRIFDPLGMTSTKFVLDSDDERARMAEPLPDDTVLVDSERQRRAHPEWQSGGGGLVSTVTDYARFARMILD
GGELDGRRYLSPAAFKAMTTDHIGPGTGVERDYFYFPGDGFGFGYGFAVRTEPGEAKPPPPGSIGELKWDGGSGTYFGVD
PKLGVITILMQQTERQRGRDVPAFKKLVYDALASD

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082101, Length=428, Percent_Identity=26.1682242990654, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17550934, Length=210, Percent_Identity=27.1428571428571, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI115533026, Length=283, Percent_Identity=23.6749116607774, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 47648; Mature: 47517

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTRHAPRTAMRTRRWTLAPAALTLLWLSIAPAAAVDCGPDAPSPAAARFAGVTAFFDQ
CCCCCCCCHHHHHHCCEEEHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHH
EIATGRLPGAVVLIAQRGKPTYLRCFGVRDVTRRDPMTPDTMFALRSMTKPITSVVAMML
HHHCCCCCCEEEEEEECCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
IDDGKLSLDDPVSKFIPAFAGVRVGIETVDADGKPVLERVAPDRPVTIADLLRHTSGITY
HCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCHHHHHHCCCCCCEEHHHHHHHHCCCEE
EYIGGELIRQAYNDANIFAGAFDNAVFAERIARLPLARQPGTLWRYGHSTDVLGRVIEIV
EHHCHHHHHHHHCCCCEEECHHCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHH
TGRTLYQVMKQRIFDPLGMTSTKFVLDSDDERARMAEPLPDDTVLVDSERQRRAHPEWQS
CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCCCCCCCEEEECCHHHHHCCCCCCC
GGGGLVSTVTDYARFARMILDGGELDGRRYLSPAAFKAMTTDHIGPGTGVERDYFYFPGD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCC
GFGFGYGFAVRTEPGEAKPPPPGSIGELKWDGGSGTYFGVDPKLGVITILMQQTERQRGR
CCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHCC
DVPAFKKLVYDALASD
CCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDTRHAPRTAMRTRRWTLAPAALTLLWLSIAPAAAVDCGPDAPSPAAARFAGVTAFFDQ
CCCCCCCHHHHHHCCEEEHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHH
EIATGRLPGAVVLIAQRGKPTYLRCFGVRDVTRRDPMTPDTMFALRSMTKPITSVVAMML
HHHCCCCCCEEEEEEECCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
IDDGKLSLDDPVSKFIPAFAGVRVGIETVDADGKPVLERVAPDRPVTIADLLRHTSGITY
HCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCHHHHHHCCCCCCEEHHHHHHHHCCCEE
EYIGGELIRQAYNDANIFAGAFDNAVFAERIARLPLARQPGTLWRYGHSTDVLGRVIEIV
EHHCHHHHHHHHCCCCEEECHHCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHH
TGRTLYQVMKQRIFDPLGMTSTKFVLDSDDERARMAEPLPDDTVLVDSERQRRAHPEWQS
CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCCCCCCCEEEECCHHHHHCCCCCCC
GGGGLVSTVTDYARFARMILDGGELDGRRYLSPAAFKAMTTDHIGPGTGVERDYFYFPGD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCC
GFGFGYGFAVRTEPGEAKPPPPGSIGELKWDGGSGTYFGVDPKLGVITILMQQTERQRGR
CCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHHCC
DVPAFKKLVYDALASD
CCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]