| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is feaR [C]
Identifier: 86749811
GI number: 86749811
Start: 3077995
End: 3078993
Strand: Reverse
Name: feaR [C]
Synonym: RPB_2694
Alternate gene names: 86749811
Gene position: 3078993-3077995 (Counterclockwise)
Preceding gene: 86749817
Following gene: 86749810
Centisome position: 57.75
GC content: 67.07
Gene sequence:
>999_bases ATGCTTCCGGAACGACTGTCGAAAGTCGTCTGCGCCGACGATCTCGAGCGTTTCGCCGGCGCATCCGGCAGCGAGTTGCG GCTCGTCACACCCGGCGTCGGCGGGCGCGATCCGATCCTCGTCGGCGAATTCCAGCGCGTTCAGTTGCGCTCCGGGCTGG CGCTGCACACCTCGAACACCCGCGAAGTCCATGATCTCCACACCGAGGCCGTGCAGCATCCAGGCCTGACGATCGCGCTG TTTCTGAGAGGACACATCGACGCCTGGTTCGGCGGGCGCCTGATCGAGATGGGGCCGCGGACCGAGGACGCGCGCGATAT CGAAGCCATCGTGGTCGCGCGCTCCGAGTCCGACAGCTTCGTCCGACGATCGGTGAAGGGCGCCCGGATCCGCAAGCTCA ACGTCACGATCACGCCGGAATGGCTCGACCAGCAGGCCCTGCTGAGTTCACCCGAATGCGCGGCGATCCTGCGCTTCTCC CGCACACATCTGGCCACCTTGCGCTGGACGGCGTCGCCGCGTCTGATCACGCTCGCCGAACAGATCCTCGGCCCGCCGCT GTTCGCCGCGCCGCTGCAGAAGCTGTACTACGAGTCGCGCGCGATCGACGTGGTGTCGGAGGCACTGCTGGCGATCTCGG ATGCGCCGGCACAATCTGGAAGCGCGACGATCCATCCGACTCATCACCGCAGCGTGCGGCGCGCCTGTGACTTCATCGAC GCCAATCTCGATCACGAACTGATGCTGCCGTCGATCGCGGCGGCCGCGGGCCTCAATTCCGGCAGCCTGCAGCGCGCCTT TCGCCTGCTGTACGGCGTGACCGTCTTCGAATACGTCCGCAGCCGGAAACTCGACCGCGCCAGGGCGGCGCTCGAACGCG ACGGCATCTCCGTGGGCGAGGCCGCCTACCTCGCCGGATACAAGACACCCGGCAATTTTTCCACGGCGTTCCGCCGCCGC TTCGGCGTCACGCCCCGGCAAATCCGCGCGACGTCCTGA
Upstream 100 bases:
>100_bases TCGGCGGCAATCTAGAGCGGTTGTAGCATCGACCTGCTCGTTCGCGGCAACAAGCGTGGTACTCTCGCGACTTCAAGCGC TGTCACTTCGGGATTTCCAA
Downstream 100 bases:
>100_bases ACGCGCGGATCGCCGGCGGGGACGCTGACCAGGGCAGGCGGGTTGTTCGAGGCCCGGCCCCGCGCCGCGCCGCCGTTCGT CGGATCAAGCGACCAAGCCA
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; AraC Family Transcription Regulator; Helix-Turn-Helix Domain-Containing Protein; Two Component AraC Family Transcriptional Regulator; Transcriptional Regulator AraC/XylS Family; Transcriptional Regulator Protein; AraC Family Regulatory Helix-Turn-Helix Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC Family Protein; Regulatory Protein PchR; Transcriptional Regulator Arac Family; Transcriptional Regulatory Protein; AraC-Family Transcriptional Regulator; Regulatory Protein; AraC/XylS Family Transcription Factor; AraC Type Helix-Turn-Helix- Domain-Containing Protein; Regulatory Protein Pchr; Enterobactin-Dependent Positive Regulator; Helix-Turn-Helix AraC Domain Protein; Transcriptional Regulator PchR
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MLPERLSKVVCADDLERFAGASGSELRLVTPGVGGRDPILVGEFQRVQLRSGLALHTSNTREVHDLHTEAVQHPGLTIAL FLRGHIDAWFGGRLIEMGPRTEDARDIEAIVVARSESDSFVRRSVKGARIRKLNVTITPEWLDQQALLSSPECAAILRFS RTHLATLRWTASPRLITLAEQILGPPLFAAPLQKLYYESRAIDVVSEALLAISDAPAQSGSATIHPTHHRSVRRACDFID ANLDHELMLPSIAAAAGLNSGSLQRAFRLLYGVTVFEYVRSRKLDRARAALERDGISVGEAAYLAGYKTPGNFSTAFRRR FGVTPRQIRATS
Sequences:
>Translated_332_residues MLPERLSKVVCADDLERFAGASGSELRLVTPGVGGRDPILVGEFQRVQLRSGLALHTSNTREVHDLHTEAVQHPGLTIAL FLRGHIDAWFGGRLIEMGPRTEDARDIEAIVVARSESDSFVRRSVKGARIRKLNVTITPEWLDQQALLSSPECAAILRFS RTHLATLRWTASPRLITLAEQILGPPLFAAPLQKLYYESRAIDVVSEALLAISDAPAQSGSATIHPTHHRSVRRACDFID ANLDHELMLPSIAAAAGLNSGSLQRAFRLLYGVTVFEYVRSRKLDRARAALERDGISVGEAAYLAGYKTPGNFSTAFRRR FGVTPRQIRATS >Mature_332_residues MLPERLSKVVCADDLERFAGASGSELRLVTPGVGGRDPILVGEFQRVQLRSGLALHTSNTREVHDLHTEAVQHPGLTIAL FLRGHIDAWFGGRLIEMGPRTEDARDIEAIVVARSESDSFVRRSVKGARIRKLNVTITPEWLDQQALLSSPECAAILRFS RTHLATLRWTASPRLITLAEQILGPPLFAAPLQKLYYESRAIDVVSEALLAISDAPAQSGSATIHPTHHRSVRRACDFID ANLDHELMLPSIAAAAGLNSGSLQRAFRLLYGVTVFEYVRSRKLDRARAALERDGISVGEAAYLAGYKTPGNFSTAFRRR FGVTPRQIRATS
Specific function: Positive Regulator Of Tyna/Maoa And Feab/Pada, The Genes For 2-Phenylethylamine Catabolism. [C]
COG id: COG2207
COG function: function code K; AraC-type DNA-binding domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36508; Mature: 36508
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPERLSKVVCADDLERFAGASGSELRLVTPGVGGRDPILVGEFQRVQLRSGLALHTSNT CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCHHHHHHHCCEEEECCCC REVHDLHTEAVQHPGLTIALFLRGHIDAWFGGRLIEMGPRTEDARDIEAIVVARSESDSF HHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCEEEECCCCCCCCCCEEEEEEEECCCHHH VRRSVKGARIRKLNVTITPEWLDQQALLSSPECAAILRFSRTHLATLRWTASPRLITLAE HHHHCCCCEEEEEEEEECHHHHCHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCHHHHHH QILGPPLFAAPLQKLYYESRAIDVVSEALLAISDAPAQSGSATIHPTHHRSVRRACDFID HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHC ANLDHELMLPSIAAAAGLNSGSLQRAFRLLYGVTVFEYVRSRKLDRARAALERDGISVGE CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AAYLAGYKTPGNFSTAFRRRFGVTPRQIRATS HHHEECCCCCCCHHHHHHHHHCCCHHHEECCC >Mature Secondary Structure MLPERLSKVVCADDLERFAGASGSELRLVTPGVGGRDPILVGEFQRVQLRSGLALHTSNT CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCHHHHHHHCCEEEECCCC REVHDLHTEAVQHPGLTIALFLRGHIDAWFGGRLIEMGPRTEDARDIEAIVVARSESDSF HHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCEEEECCCCCCCCCCEEEEEEEECCCHHH VRRSVKGARIRKLNVTITPEWLDQQALLSSPECAAILRFSRTHLATLRWTASPRLITLAE HHHHCCCCEEEEEEEEECHHHHCHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCHHHHHH QILGPPLFAAPLQKLYYESRAIDVVSEALLAISDAPAQSGSATIHPTHHRSVRRACDFID HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHC ANLDHELMLPSIAAAAGLNSGSLQRAFRLLYGVTVFEYVRSRKLDRARAALERDGISVGE CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AAYLAGYKTPGNFSTAFRRRFGVTPRQIRATS HHHEECCCCCCCHHHHHHHHHCCCHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA