| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is metG [H]
Identifier: 86749798
GI number: 86749798
Start: 3062953
End: 3064497
Strand: Direct
Name: metG [H]
Synonym: RPB_2681
Alternate gene names: 86749798
Gene position: 3062953-3064497 (Clockwise)
Preceding gene: 86749797
Following gene: 86749799
Centisome position: 57.45
GC content: 65.7
Gene sequence:
>1545_bases ATGGCGCAGCGAAACTCGTTCTACATCACCACCGCAATCTCCTATCCCAACGGCGCGCCGCATATCGGCCACGCCTATGA GGCGATCGCGACCGACGCGCTGGCGCGATTCCAGCGGCTCGACGGCCGTGACGTGTTCTTCCTGACCGGCACCGACGAGC ACGGCCTGAAGATGATCCAGACCGCGCAGAAGGAGGGCGTCGAGACCCACGTGCTCGCCGCCCGCAATGCCGGCCGCTTC CGCGACATGGACGACCGCTTCGGCATCTCCTACGACCGCTTCATCCGCACCTCGGAAGAGCAGCATCATCGCTCCGTCCA GGAGGTCTGGAAGCGGATGCAGGCGAACGGCGACATCTATCTCGACAGCTATGCCGGCTGGTATTCGGTCCGCGACGAGG CCTATTACGCCGAGGACGAAACCGTCGTCGGCGAGGATCAGATTCGCCGCGGCCCGCAGGGCACGCCGGTCGAATGGGTC GAGGAGCGGAGCTACTTCTTCAAGCTCTCGGCCTATCAGGACAAACTCCTGAAGCTGTACGAGGACCAGCCGGACTTCAT CGGCCCGGATTCCCGCCGCAACGAGGTGATCAGCTTCGTCAAGGGCGGGCTGAAGGACCTGTCGGTGTCGCGCACCACCT TCGACTGGGGCGTCAAGGTGCCGGGCGATCCGGAGCACGTGATGTATGTCTGGGTCGATGCGCTGACCAACTACATCACC GGCGTCGGCTTCCCCGACGAGAGCGACGCCAACTGGCATTATTGGCCGGCCGACGTGCACGTCATCGGCAAGGACATCAT CCGCTTCCACGCGGTGTACTGGCCGGCGTTCCTGATGTCGGCCGGCATCCCGATCCAGAAGCGCGTCTACGCCCACGGCT TTTTGTTCAACAAGGGCGAGAAGATGTCGAAATCGGTCGGCAATATCGTCGACCCGTTCAATCTCGCCGATCAATACGGC GTCGATCAGGTGCGCTACTTCTTCCTGCGCGAGGTGCCGTTCGGCGCCGACGGCAGCTATAATCACGAGGCGATCGTCAA TCGCATCAACGCCGACCTCGCCAACGACCTCGGCAATCTGGCGCAGCGCTCGCTGACCATGGTGGCCAAGCAGTGCGACG CCCAGGTGCCGCAGCACGGCGAGTTCAGCGAGGCCGACAAGGCGATGCTGGCGATGGCCGACGGCATGATCGCGATCGCA CGCCCGGCGATGGCAACGCAGCAGATCCATCAGGCGCTGAACGCGGTGTGGGCGGTGGTGGCGGAAGCCAACCGTTACTT CGCCGGCGAAGCGCCGTGGGCGCTGGCCAAGACCGATCCGGCGCGGCAGAAGACGGTGCTCTACGTCACCGCCGAAGTGC TGCGGCAGGTCGGCATCCTGGCGCAGCCCGCGATCCCGGCCTCGGCGGCCAAGCTGCTCGACATCCTCGGCGTCGCCGAG GGCGCGCGCGACTTCGCGGCGCTGCCGACGCGGATCGTGCCGGGCACGCCACTGCCGGCCCCGGCGCCTATCTTCCCGCG CTATGTCGAGCCGGCGACCGCCTGA
Upstream 100 bases:
>100_bases CTCGCGGAGGCGGTGCGCTGATGCGCTCGGGCGATCACACAGGCTGATGGTCAGCGCCGCCGCCCTCATTCGATCCAGTT GTTGAAAGGCGTCCGCGCAG
Downstream 100 bases:
>100_bases TGCCGATGCTGGTCGACAGCCACTGCCATCTCGACTTCCCCGACTTTGCCGACGATCTCGCCGGCATCGTCGCCCGCGCC GAAGCGAGCGGGGTGGGGCG
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MAQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGRDVFFLTGTDEHGLKMIQTAQKEGVETHVLAARNAGRF RDMDDRFGISYDRFIRTSEEQHHRSVQEVWKRMQANGDIYLDSYAGWYSVRDEAYYAEDETVVGEDQIRRGPQGTPVEWV EERSYFFKLSAYQDKLLKLYEDQPDFIGPDSRRNEVISFVKGGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIT GVGFPDESDANWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPIQKRVYAHGFLFNKGEKMSKSVGNIVDPFNLADQYG VDQVRYFFLREVPFGADGSYNHEAIVNRINADLANDLGNLAQRSLTMVAKQCDAQVPQHGEFSEADKAMLAMADGMIAIA RPAMATQQIHQALNAVWAVVAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQVGILAQPAIPASAAKLLDILGVAE GARDFAALPTRIVPGTPLPAPAPIFPRYVEPATA
Sequences:
>Translated_514_residues MAQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGRDVFFLTGTDEHGLKMIQTAQKEGVETHVLAARNAGRF RDMDDRFGISYDRFIRTSEEQHHRSVQEVWKRMQANGDIYLDSYAGWYSVRDEAYYAEDETVVGEDQIRRGPQGTPVEWV EERSYFFKLSAYQDKLLKLYEDQPDFIGPDSRRNEVISFVKGGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIT GVGFPDESDANWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPIQKRVYAHGFLFNKGEKMSKSVGNIVDPFNLADQYG VDQVRYFFLREVPFGADGSYNHEAIVNRINADLANDLGNLAQRSLTMVAKQCDAQVPQHGEFSEADKAMLAMADGMIAIA RPAMATQQIHQALNAVWAVVAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQVGILAQPAIPASAAKLLDILGVAE GARDFAALPTRIVPGTPLPAPAPIFPRYVEPATA >Mature_513_residues AQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGRDVFFLTGTDEHGLKMIQTAQKEGVETHVLAARNAGRFR DMDDRFGISYDRFIRTSEEQHHRSVQEVWKRMQANGDIYLDSYAGWYSVRDEAYYAEDETVVGEDQIRRGPQGTPVEWVE ERSYFFKLSAYQDKLLKLYEDQPDFIGPDSRRNEVISFVKGGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYITG VGFPDESDANWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPIQKRVYAHGFLFNKGEKMSKSVGNIVDPFNLADQYGV DQVRYFFLREVPFGADGSYNHEAIVNRINADLANDLGNLAQRSLTMVAKQCDAQVPQHGEFSEADKAMLAMADGMIAIAR PAMATQQIHQALNAVWAVVAEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQVGILAQPAIPASAAKLLDILGVAEG ARDFAALPTRIVPGTPLPAPAPIFPRYVEPATA
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=513, Percent_Identity=37.4269005847953, Blast_Score=324, Evalue=1e-88, Organism=Homo sapiens, GI14043022, Length=515, Percent_Identity=23.1067961165049, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI7661872, Length=192, Percent_Identity=26.0416666666667, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1788432, Length=498, Percent_Identity=24.6987951807229, Blast_Score=168, Evalue=8e-43, Organism=Escherichia coli, GI1786861, Length=179, Percent_Identity=26.2569832402235, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI212645096, Length=499, Percent_Identity=33.8677354709419, Blast_Score=305, Evalue=4e-83, Organism=Caenorhabditis elegans, GI71992781, Length=386, Percent_Identity=33.419689119171, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17540794, Length=559, Percent_Identity=25.2236135957066, Blast_Score=137, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6321610, Length=522, Percent_Identity=32.3754789272031, Blast_Score=294, Evalue=2e-80, Organism=Saccharomyces cerevisiae, GI6321704, Length=519, Percent_Identity=23.8921001926782, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI21358483, Length=504, Percent_Identity=35.9126984126984, Blast_Score=309, Evalue=3e-84, Organism=Drosophila melanogaster, GI24655311, Length=551, Percent_Identity=25.0453720508167, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI21355409, Length=186, Percent_Identity=27.4193548387097, Blast_Score=76, Evalue=7e-14,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 57461; Mature: 57330
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGRDVFFLTGTDEHGLKMIQ CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH TAQKEGVETHVLAARNAGRFRDMDDRFGISYDRFIRTSEEQHHRSVQEVWKRMQANGDIY HHHHCCCCEEEEEECCCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE LDSYAGWYSVRDEAYYAEDETVVGEDQIRRGPQGTPVEWVEERSYFFKLSAYQDKLLKLY EECCCCEEEECCCEEECCCCCEECHHHHCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHH EDQPDFIGPDSRRNEVISFVKGGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIT CCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCEEEECCCCCCCCCCEEEEEEHHHHHHHHH GVGFPDESDANWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPIQKRVYAHGFLFNKGE CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCEEECCCH KMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGADGSYNHEAIVNRINADLANDLGNL HHHHHHCCCCCCCCCHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AQRSLTMVAKQCDAQVPQHGEFSEADKAMLAMADGMIAIARPAMATQQIHQALNAVWAVV HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHH AEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQVGILAQPAIPASAAKLLDILGVAE HHHCCEECCCCCEEECCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC GARDFAALPTRIVPGTPLPAPAPIFPRYVEPATA CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AQRNSFYITTAISYPNGAPHIGHAYEAIATDALARFQRLDGRDVFFLTGTDEHGLKMIQ CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH TAQKEGVETHVLAARNAGRFRDMDDRFGISYDRFIRTSEEQHHRSVQEVWKRMQANGDIY HHHHCCCCEEEEEECCCCCCCCCHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE LDSYAGWYSVRDEAYYAEDETVVGEDQIRRGPQGTPVEWVEERSYFFKLSAYQDKLLKLY EECCCCEEEECCCEEECCCCCEECHHHHCCCCCCCCHHHHHCCCCEEEEHHHHHHHHHHH EDQPDFIGPDSRRNEVISFVKGGLKDLSVSRTTFDWGVKVPGDPEHVMYVWVDALTNYIT CCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCEEEECCCCCCCCCCEEEEEEHHHHHHHHH GVGFPDESDANWHYWPADVHVIGKDIIRFHAVYWPAFLMSAGIPIQKRVYAHGFLFNKGE CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCEEECCCH KMSKSVGNIVDPFNLADQYGVDQVRYFFLREVPFGADGSYNHEAIVNRINADLANDLGNL HHHHHHCCCCCCCCCHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AQRSLTMVAKQCDAQVPQHGEFSEADKAMLAMADGMIAIARPAMATQQIHQALNAVWAVV HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHH AEANRYFAGEAPWALAKTDPARQKTVLYVTAEVLRQVGILAQPAIPASAAKLLDILGVAE HHHCCEECCCCCEEECCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC GARDFAALPTRIVPGTPLPAPAPIFPRYVEPATA CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]